BLASTX nr result

ID: Dioscorea21_contig00025832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025832
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002462682.1| hypothetical protein SORBIDRAFT_02g030140 [S...   112   6e-23
ref|NP_001136678.1| uncharacterized protein LOC100216808 [Zea ma...   108   8e-22
ref|XP_003578452.1| PREDICTED: DNA polymerase delta subunit 4-li...   108   1e-21
ref|NP_001063696.1| Os09g0520100 [Oryza sativa Japonica Group] g...   107   1e-21
dbj|BAK00382.1| predicted protein [Hordeum vulgare subsp. vulgare]    106   4e-21

>ref|XP_002462682.1| hypothetical protein SORBIDRAFT_02g030140 [Sorghum bicolor]
           gi|241926059|gb|EER99203.1| hypothetical protein
           SORBIDRAFT_02g030140 [Sorghum bicolor]
          Length = 131

 Score =  112 bits (280), Expect = 6e-23
 Identities = 52/95 (54%), Positives = 66/95 (69%)
 Frame = +1

Query: 208 SLGAGDPAQTPALVAHGSFDLHDEYDEMEVKLRQFDMDMKYGPCLGLTRLERWNRAESME 387
           S+GA D AQT ALV+HGS+DL D++ + E +LRQFDMDMK+GPC+G+TRL+RW RA +M 
Sbjct: 37  SVGAPDTAQTSALVSHGSWDLKDDFGDQEEQLRQFDMDMKFGPCIGVTRLQRWERASAMG 96

Query: 388 LHPPLELGSILKXXXXXXXXXXXTTLVECLWEGRV 492
           LHPP  L  +L            +  VECLWEG V
Sbjct: 97  LHPPAHLRDLLLHAPSTKNRSDGSPSVECLWEGNV 131


>ref|NP_001136678.1| uncharacterized protein LOC100216808 [Zea mays]
           gi|194696604|gb|ACF82386.1| unknown [Zea mays]
           gi|223942961|gb|ACN25564.1| unknown [Zea mays]
           gi|414886275|tpg|DAA62289.1| TPA: delta DNA polymerase
           isoform 1 [Zea mays] gi|414886276|tpg|DAA62290.1| TPA:
           delta DNA polymerase isoform 2 [Zea mays]
           gi|414886277|tpg|DAA62291.1| TPA: delta DNA polymerase
           isoform 3 [Zea mays]
          Length = 131

 Score =  108 bits (270), Expect = 8e-22
 Identities = 50/95 (52%), Positives = 66/95 (69%)
 Frame = +1

Query: 208 SLGAGDPAQTPALVAHGSFDLHDEYDEMEVKLRQFDMDMKYGPCLGLTRLERWNRAESME 387
           S+GA D AQT ALV+HGS+DL D++ + E +LRQFD+DMK+GPC+G+TRL+RW RA +M 
Sbjct: 37  SVGASDAAQTSALVSHGSWDLKDDFGDEEEQLRQFDVDMKFGPCIGVTRLQRWERASAMG 96

Query: 388 LHPPLELGSILKXXXXXXXXXXXTTLVECLWEGRV 492
           L PP  L  +L            +  VECLWEG+V
Sbjct: 97  LQPPAHLRDLLLHAASTKNRGGGSPSVECLWEGKV 131


>ref|XP_003578452.1| PREDICTED: DNA polymerase delta subunit 4-like [Brachypodium
           distachyon]
          Length = 131

 Score =  108 bits (269), Expect = 1e-21
 Identities = 55/133 (41%), Positives = 73/133 (54%)
 Frame = +1

Query: 94  MATSDIKGFYKQXXXXXXXXXXXXXXXXXXXXXXXXXVSLGAGDPAQTPALVAHGSFDLH 273
           MA+S +K FY+Q                          S+GA +PAQT AL++HGS DL 
Sbjct: 1   MASSGVKDFYRQKKKGGITKTSSCSKKKTQQYTGG--ASVGASNPAQTSALISHGSLDLK 58

Query: 274 DEYDEMEVKLRQFDMDMKYGPCLGLTRLERWNRAESMELHPPLELGSILKXXXXXXXXXX 453
           D+  E E +LRQFDMDMK+GPC+G+ RL+RW RA +M L PP  L  +L           
Sbjct: 59  DDISEQEEQLRQFDMDMKFGPCIGVNRLQRWERASAMGLQPPSHLRDLLAHSASMNNHNN 118

Query: 454 XTTLVECLWEGRV 492
            +   ECLWEG++
Sbjct: 119 GSPSPECLWEGKI 131


>ref|NP_001063696.1| Os09g0520100 [Oryza sativa Japonica Group]
           gi|52075585|dbj|BAD46695.1| unknown protein [Oryza
           sativa Japonica Group] gi|52076158|dbj|BAD46671.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113631929|dbj|BAF25610.1| Os09g0520100 [Oryza sativa
           Japonica Group] gi|125564401|gb|EAZ09781.1| hypothetical
           protein OsI_32069 [Oryza sativa Indica Group]
           gi|125606356|gb|EAZ45392.1| hypothetical protein
           OsJ_30041 [Oryza sativa Japonica Group]
           gi|215767511|dbj|BAG99739.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 131

 Score =  107 bits (268), Expect = 1e-21
 Identities = 49/95 (51%), Positives = 64/95 (67%)
 Frame = +1

Query: 208 SLGAGDPAQTPALVAHGSFDLHDEYDEMEVKLRQFDMDMKYGPCLGLTRLERWNRAESME 387
           S+GA D AQT AL++HG+ DL D++ E E +LR FDMDMK+GPC+G+TRL+RW RA +M 
Sbjct: 37  SVGASDTAQTSALISHGNLDLKDDFSEQEEQLRLFDMDMKFGPCIGVTRLQRWERASAMG 96

Query: 388 LHPPLELGSILKXXXXXXXXXXXTTLVECLWEGRV 492
           LHPP  L  +L               +ECLWEG+V
Sbjct: 97  LHPPPHLRDLLLNNTHAGNHNNNGPSLECLWEGKV 131


>dbj|BAK00382.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 131

 Score =  106 bits (264), Expect = 4e-21
 Identities = 54/133 (40%), Positives = 73/133 (54%)
 Frame = +1

Query: 94  MATSDIKGFYKQXXXXXXXXXXXXXXXXXXXXXXXXXVSLGAGDPAQTPALVAHGSFDLH 273
           MA++ +K FY+Q                          S+GA + AQT AL++HGSFDL 
Sbjct: 1   MASTGVKDFYRQKKKGGAGKTSASSKKKPQNYTGG--ASVGASNKAQTAALISHGSFDLK 58

Query: 274 DEYDEMEVKLRQFDMDMKYGPCLGLTRLERWNRAESMELHPPLELGSILKXXXXXXXXXX 453
           D++ E E +LRQFDMDMK+GPC+G+ RL+RW RA +M L PP  L  +L           
Sbjct: 59  DDFSEQEEQLRQFDMDMKFGPCIGVNRLQRWERASAMGLQPPPHLRDLLARAASGNNRNN 118

Query: 454 XTTLVECLWEGRV 492
                ECLWEG++
Sbjct: 119 GGPSPECLWEGKI 131


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