BLASTX nr result

ID: Dioscorea21_contig00025769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025769
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN33754.1| retrotransposon protein [Cucumis melo subsp. melo]      82   3e-14
gb|EEE65370.1| hypothetical protein OsJ_20664 [Oryza sativa Japo...    82   4e-14
gb|EEC80265.1| hypothetical protein OsI_22233 [Oryza sativa Indi...    82   4e-14
gb|AFW80777.1| hypothetical protein ZEAMMB73_073484 [Zea mays]         80   1e-13
gb|AFW66194.1| hypothetical protein ZEAMMB73_168189 [Zea mays]         80   1e-13

>gb|ADN33754.1| retrotransposon protein [Cucumis melo subsp. melo]
          Length = 623

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
 Frame = -2

Query: 337 VHTSDRICRELLRMKMGAFHSLCNRLRSY-GLARKRFVSVEEQVAMFVHTVGHDSRNRVG 161
           +H SD +CR+  RM    F  LC+ LR+  GL+    V VEE VAMF+H + HD +NRV 
Sbjct: 2   IHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVI 61

Query: 160 SFTFFRSGQTVSYYFHRVLNACLNLYKDVVK 68
              F RSG+TVS +F+ VL A L LY++++K
Sbjct: 62  QQEFVRSGETVSRHFNIVLLAVLRLYEELIK 92


>gb|EEE65370.1| hypothetical protein OsJ_20664 [Oryza sativa Japonica Group]
          Length = 372

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
 Frame = -2

Query: 334 HTSDRICRELLRMKMGAFHSLCNRLRSYGLARKRF-VSVEEQVAMFVHTVGHDSRNRVGS 158
           H ++  C   LRM+   FH LC  LRS  L  + F V++EEQVAMF+H VGH+  NR  +
Sbjct: 36  HGTEAHCISELRMRKVVFHKLCAELRSRALLEETFHVTIEEQVAMFIHVVGHNWSNRPIA 95

Query: 157 FTFFRSGQTVSYYFHRVLNACLNLYKDVV 71
           F F RSG+TVS YF+ VL+A   L +D+V
Sbjct: 96  FEFMRSGETVSRYFNLVLDALCILARDLV 124


>gb|EEC80265.1| hypothetical protein OsI_22233 [Oryza sativa Indica Group]
          Length = 263

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
 Frame = -2

Query: 334 HTSDRICRELLRMKMGAFHSLCNRLRSYGLARKRF-VSVEEQVAMFVHTVGHDSRNRVGS 158
           H ++  C   LRM+   FH LC  LRS  L  + F V++EEQVAMF+H VGH+  NR  +
Sbjct: 17  HGTEAHCISELRMRKVVFHKLCAELRSRALLEETFHVTIEEQVAMFIHVVGHNWSNRPIA 76

Query: 157 FTFFRSGQTVSYYFHRVLNACLNLYKDVV 71
           F F RSG+TVS YF+ VL+A   L +D+V
Sbjct: 77  FEFMRSGETVSRYFNLVLDALCILARDLV 105


>gb|AFW80777.1| hypothetical protein ZEAMMB73_073484 [Zea mays]
          Length = 557

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 52/116 (44%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
 Frame = -2

Query: 340 FVHTSDRI-CRELLRMKMGAFHSLCNRLRSYGLARKRF-VSVEEQVAMFVHTVGHDSRNR 167
           F++ SD I C ELLRM    F  LC   RS  L R     SVEEQ AMF+H VGH+ R R
Sbjct: 149 FIYESDDIQCVELLRMSKVPFFELCALFRSRHLLRDSIHSSVEEQAAMFLHVVGHNQRFR 208

Query: 166 VGSFTFFRSGQTVSYYFHRVLNACLNLYKDVVKNAEAQNSPNDKAYV-QDWFHYFQ 2
           V  FTF RS +T+S YFH VL+A   L  +++       S + K +V + W+ YF+
Sbjct: 209 VLKFTFRRSTETISRYFHEVLSAIGELRTEMI--TPPSTSVHPKIHVSRRWYPYFK 262


>gb|AFW66194.1| hypothetical protein ZEAMMB73_168189 [Zea mays]
          Length = 422

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 51/115 (44%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
 Frame = -2

Query: 340 FVHTSDRICRELLRMKMGAFHSLCNRLRSYGLARKRF-VSVEEQVAMFVHTVGHDSRNRV 164
           F  + D  C ELLRM    F  LC   RS  L R     SVEEQVAMF+H VGH+ R RV
Sbjct: 15  FYESDDIQCVELLRMSKVPFFELCGLFRSRHLLRDSIHSSVEEQVAMFLHVVGHNQRFRV 74

Query: 163 GSFTFFRSGQTVSYYFHRVLNACLNLYKDVVKNAEAQNSPNDKAYV-QDWFHYFQ 2
             FTF RS +T+S YFH VL+A   L  ++        S + K +V + W+ YF+
Sbjct: 75  LKFTFRRSTETISRYFHEVLSAIGELRSEM--TTPPSTSVHPKIHVSRRWYPYFK 127


Top