BLASTX nr result

ID: Dioscorea21_contig00025757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025757
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002453810.1| hypothetical protein SORBIDRAFT_04g018371 [S...    84   5e-14
ref|XP_002309291.1| predicted protein [Populus trichocarpa] gi|2...    83   6e-14
ref|XP_002332426.1| predicted protein [Populus trichocarpa] gi|2...    83   8e-14
emb|CAN63022.1| hypothetical protein VITISV_042518 [Vitis vinifera]    82   1e-13
ref|XP_002300413.1| glutamate-gated kainate-type ion channel rec...    82   1e-13

>ref|XP_002453810.1| hypothetical protein SORBIDRAFT_04g018371 [Sorghum bicolor]
           gi|241933641|gb|EES06786.1| hypothetical protein
           SORBIDRAFT_04g018371 [Sorghum bicolor]
          Length = 498

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 43/119 (36%), Positives = 67/119 (56%)
 Frame = +1

Query: 19  WKSPCPRKISLFNWLVWKDKILTLENLASRRCNNLPTATCVLCHTDIESVDHLFLYCSVA 198
           WK   P ++  F WL+  +++LT +NLA RR  N P  TC+ C+ + ES+ HLF  C VA
Sbjct: 314 WKLNIPPRVQFFLWLLSNNRVLTRDNLAKRREVNDP--TCLFCN-EKESITHLFFQCCVA 370

Query: 199 RGLWDYFGALINLPTPPVSMKDLWGVWRNNIRGMSREVADLVVKAIVWIIWLVRNELIF 375
           R +W+Y    +N        + +  +W  N + M   V ++V  A++W+IW +RN L F
Sbjct: 371 RNVWEYISGCLN-KVVGADFESVASLWIANKKYM---VCNIVTSAVIWVIWKLRNSLCF 425


>ref|XP_002309291.1| predicted protein [Populus trichocarpa] gi|222855267|gb|EEE92814.1|
            predicted protein [Populus trichocarpa]
          Length = 1285

 Score = 83.2 bits (204), Expect = 6e-14
 Identities = 46/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
 Frame = +1

Query: 19   WKSPCPRKISLFNWLVWKDKILTLENLASRRCNNLPTATCVLCHTDIESVDHLFLYCSVA 198
            WK   P KI +F WL+    + T + LA RR  N   A C  C  +IE++ HLF  C  +
Sbjct: 1117 WKGFAPPKIDVFIWLLLNGSVCTKDFLAKRRIINYEDALCPFCCKEIETIHHLFHLCPTS 1176

Query: 199  RGLWD----YFGALINLPTPPVSMKDLW-GVWRNNIRGMSREVADLVVKAIVWIIWLVRN 363
              LW     +FG +  LP  P      W G+ + N +   R+   L+ K + W IW+ RN
Sbjct: 1177 WSLWGRLFRWFGCVGCLPKDPNHNLQEWSGLLKGNFQ---RQAITLLCKGLYWSIWIARN 1233

Query: 364  ELIFDSKS 387
             +IFDSK+
Sbjct: 1234 NMIFDSKT 1241


>ref|XP_002332426.1| predicted protein [Populus trichocarpa] gi|222832379|gb|EEE70856.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 46/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
 Frame = +1

Query: 19  WKSPCPRKISLFNWLVWKDKILTLENLASRRCNNLPTATCVLCHTDIESVDHLFLYCSVA 198
           WK   P KI +F WL+    + T + LA RR  N   A C  C  +IE++ HLF  C  +
Sbjct: 157 WKGFAPPKIDVFIWLLLNGSVCTKDFLAKRRIINYEDALCPFCCKEIETIHHLFHLCPTS 216

Query: 199 RGLWD----YFGALINLPTPPVSMKDLW-GVWRNNIRGMSREVADLVVKAIVWIIWLVRN 363
             LW     +FG +  LP  P      W G+ + N +   R+   L+ K + W IW+ RN
Sbjct: 217 WSLWGRLFRWFGRVGCLPKDPNHNLQEWSGLLKGNFQ---RQAITLLCKGLYWSIWIARN 273

Query: 364 ELIFDSKS 387
            +IFDSK+
Sbjct: 274 NMIFDSKT 281


>emb|CAN63022.1| hypothetical protein VITISV_042518 [Vitis vinifera]
          Length = 311

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 48/132 (36%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
 Frame = +1

Query: 7   ARFFWKSPCPRKISLFNWLVWKDKILTLENLASRR-CNNLPTATCVLCHTDIESVDHLFL 183
           A+F W S  P K+    W+V   K+ T + L  RR   +L    C+LC  + ES+DHLFL
Sbjct: 137 AKFLWSSKVPSKVKALAWIVAHGKVNTNDKLQLRRPYKSLCPQWCILCKGNRESIDHLFL 196

Query: 184 YCSVARGLWDYFGALINLP-TPPVSMKDLWGV----WRNNIRGMSREVADLVVKAIVWII 348
           YC V  GLW+    L  L   PP S +D+  +      N++RG  + +  +    +VWI+
Sbjct: 197 YCPVTIGLWNKLFKLAGLDWVPPRSFEDMLVIAFKGLGNSLRG--KTLWQVACLTLVWIV 254

Query: 349 WLVRNELIFDSK 384
           W  RN  IF+ K
Sbjct: 255 WQERNNRIFEDK 266


>ref|XP_002300413.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222847671|gb|EEE85218.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 1005

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 46/128 (35%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
 Frame = +1

Query: 19   WKSPCPRKISLFNWLVWKDKILTLENLASRRCNNLPTATCVLCHTDIESVDHLFLYCSVA 198
            WK   P KI +F WL+    + T   LA RR  N   A C  C  +IE++ HLF  C  +
Sbjct: 879  WKGFAPPKIDVFIWLLLNGSVCTKYFLAKRRIINYEEALCPFCCKEIETIHHLFHLCPTS 938

Query: 199  RGLW----DYFGALINLPTPPVSMKDLW-GVWRNNIRGMSREVADLVVKAIVWIIWLVRN 363
              LW     +FG +  LP  P      W G+ + N +   R+   L+ K + W IW+ RN
Sbjct: 939  WSLWGRLFSWFGCVGCLPKDPNHNLQEWSGLLKGNFQ---RQAITLLCKGLYWSIWIARN 995

Query: 364  ELIFDSKS 387
             +IFDSK+
Sbjct: 996  NMIFDSKN 1003


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