BLASTX nr result

ID: Dioscorea21_contig00025756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025756
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003580149.1| PREDICTED: exosome complex component rrp4-li...    60   2e-07
ref|XP_003564042.1| PREDICTED: exosome complex component rrp4-li...    60   2e-07
ref|XP_002447269.1| hypothetical protein SORBIDRAFT_06g031660 [S...    58   9e-07
gb|ACF86207.1| unknown [Zea mays] gi|414584980|tpg|DAA35551.1| T...    57   1e-06
ref|NP_001136723.1| hypothetical protein [Zea mays] gi|194696768...    57   1e-06

>ref|XP_003580149.1| PREDICTED: exosome complex component rrp4-like [Brachypodium
           distachyon]
          Length = 325

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/49 (59%), Positives = 38/49 (77%)
 Frame = -1

Query: 147 MRDLQVSLSQTQRVRFQSALQQLKDLSPGSGHAATVVVADSIPVNLEDS 1
           MRDL   L+QTQRVR ++AL +L+ L+P +  AA+V VADSIPVN ED+
Sbjct: 1   MRDLHFPLNQTQRVRLEAALHELQTLAPAAASAASVTVADSIPVNQEDN 49


>ref|XP_003564042.1| PREDICTED: exosome complex component rrp4-like [Brachypodium
           distachyon]
          Length = 319

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/49 (57%), Positives = 39/49 (79%)
 Frame = -1

Query: 147 MRDLQVSLSQTQRVRFQSALQQLKDLSPGSGHAATVVVADSIPVNLEDS 1
           MRDL + L+QTQRVR ++AL +L+ L+P +  AA+V VAD+IPVN ED+
Sbjct: 1   MRDLHLPLNQTQRVRLEAALHELQSLAPAAASAASVTVADNIPVNQEDN 49


>ref|XP_002447269.1| hypothetical protein SORBIDRAFT_06g031660 [Sorghum bicolor]
           gi|241938452|gb|EES11597.1| hypothetical protein
           SORBIDRAFT_06g031660 [Sorghum bicolor]
          Length = 319

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/49 (55%), Positives = 38/49 (77%)
 Frame = -1

Query: 147 MRDLQVSLSQTQRVRFQSALQQLKDLSPGSGHAATVVVADSIPVNLEDS 1
           M+D  +SL+QTQRVR ++AL +L+ L+P +  AA V VAD+IPVN ED+
Sbjct: 1   MKDRHLSLNQTQRVRLEAALHELQSLAPAAASAAAVTVADTIPVNQEDN 49


>gb|ACF86207.1| unknown [Zea mays] gi|414584980|tpg|DAA35551.1| TPA: hypothetical
           protein ZEAMMB73_729707 [Zea mays]
          Length = 319

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/49 (55%), Positives = 39/49 (79%)
 Frame = -1

Query: 147 MRDLQVSLSQTQRVRFQSALQQLKDLSPGSGHAATVVVADSIPVNLEDS 1
           M+D  +SL+QTQRVR ++ALQ+L+ ++P +  AA V VAD+IPVN ED+
Sbjct: 1   MKDRHLSLNQTQRVRLEAALQELQSVAPAAVSAAAVTVADTIPVNQEDN 49


>ref|NP_001136723.1| hypothetical protein [Zea mays] gi|194696768|gb|ACF82468.1| unknown
           [Zea mays] gi|414584979|tpg|DAA35550.1| TPA:
           hypothetical protein ZEAMMB73_729707 [Zea mays]
          Length = 209

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/49 (55%), Positives = 39/49 (79%)
 Frame = -1

Query: 147 MRDLQVSLSQTQRVRFQSALQQLKDLSPGSGHAATVVVADSIPVNLEDS 1
           M+D  +SL+QTQRVR ++ALQ+L+ ++P +  AA V VAD+IPVN ED+
Sbjct: 1   MKDRHLSLNQTQRVRLEAALQELQSVAPAAVSAAAVTVADTIPVNQEDN 49


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