BLASTX nr result

ID: Dioscorea21_contig00025751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025751
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM95645.1| WD-repeat protein GhTTG3 [Gossypium hirsutum]          138   4e-31
gb|AAK19614.1|AF336281_1 GHTTG1 [Gossypium hirsutum]                  138   4e-31
gb|AFD20562.1| transparent testa glabra 3, partial [Gossypium ar...   138   4e-31
emb|CAN67365.1| hypothetical protein VITISV_033304 [Vitis vinifera]   137   7e-31
ref|XP_003634157.1| PREDICTED: protein TRANSPARENT TESTA GLABRA ...   137   7e-31

>gb|AAM95645.1| WD-repeat protein GhTTG3 [Gossypium hirsutum]
          Length = 345

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/71 (88%), Positives = 68/71 (95%)
 Frame = +1

Query: 1   TVWDIERCAVETQLIAHDKEVYDIAWGEVGVFASVSADGSVRIFDLRDKEHSTIVYESPR 180
           T+WDIE+C VETQLIAHDKEVYDIAWGE  VFASVSADGSVRIFDLRDKEHSTI+YESP+
Sbjct: 162 TIWDIEKCVVETQLIAHDKEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQ 221

Query: 181 PETPLLRLAWN 213
           P+TPLLRLAWN
Sbjct: 222 PDTPLLRLAWN 232


>gb|AAK19614.1|AF336281_1 GHTTG1 [Gossypium hirsutum]
          Length = 345

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/71 (88%), Positives = 68/71 (95%)
 Frame = +1

Query: 1   TVWDIERCAVETQLIAHDKEVYDIAWGEVGVFASVSADGSVRIFDLRDKEHSTIVYESPR 180
           T+WDIE+C VETQLIAHDKEVYDIAWGE  VFASVSADGSVRIFDLRDKEHSTI+YESP+
Sbjct: 162 TIWDIEKCVVETQLIAHDKEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQ 221

Query: 181 PETPLLRLAWN 213
           P+TPLLRLAWN
Sbjct: 222 PDTPLLRLAWN 232


>gb|AFD20562.1| transparent testa glabra 3, partial [Gossypium arboreum]
          Length = 345

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/71 (88%), Positives = 68/71 (95%)
 Frame = +1

Query: 1   TVWDIERCAVETQLIAHDKEVYDIAWGEVGVFASVSADGSVRIFDLRDKEHSTIVYESPR 180
           T+WDIE+C VETQLIAHDKEVYDIAWGE  VFASVSADGSVRIFDLRDKEHSTI+YESP+
Sbjct: 162 TIWDIEKCVVETQLIAHDKEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQ 221

Query: 181 PETPLLRLAWN 213
           P+TPLLRLAWN
Sbjct: 222 PDTPLLRLAWN 232


>emb|CAN67365.1| hypothetical protein VITISV_033304 [Vitis vinifera]
          Length = 336

 Score =  137 bits (346), Expect = 7e-31
 Identities = 63/71 (88%), Positives = 68/71 (95%)
 Frame = +1

Query: 1   TVWDIERCAVETQLIAHDKEVYDIAWGEVGVFASVSADGSVRIFDLRDKEHSTIVYESPR 180
           T+WD+ER  VETQLIAHDKEVYDIAWGE GVFASVSADGSVRIFDLRDKEHSTI+YESP+
Sbjct: 153 TIWDVERGVVETQLIAHDKEVYDIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPQ 212

Query: 181 PETPLLRLAWN 213
           P+TPLLRLAWN
Sbjct: 213 PDTPLLRLAWN 223


>ref|XP_003634157.1| PREDICTED: protein TRANSPARENT TESTA GLABRA 1 isoform 1 [Vitis
           vinifera] gi|359490757|ref|XP_003634158.1| PREDICTED:
           protein TRANSPARENT TESTA GLABRA 1 isoform 2 [Vitis
           vinifera] gi|113707434|gb|ABF66625.2| WD-repeat 1 [Vitis
           vinifera]
          Length = 336

 Score =  137 bits (346), Expect = 7e-31
 Identities = 63/71 (88%), Positives = 68/71 (95%)
 Frame = +1

Query: 1   TVWDIERCAVETQLIAHDKEVYDIAWGEVGVFASVSADGSVRIFDLRDKEHSTIVYESPR 180
           T+WD+ER  VETQLIAHDKEVYDIAWGE GVFASVSADGSVRIFDLRDKEHSTI+YESP+
Sbjct: 153 TIWDVERGVVETQLIAHDKEVYDIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPQ 212

Query: 181 PETPLLRLAWN 213
           P+TPLLRLAWN
Sbjct: 213 PDTPLLRLAWN 223


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