BLASTX nr result

ID: Dioscorea21_contig00025718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025718
         (1127 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001764219.1| predicted protein [Physcomitrella patens sub...   129   2e-27
gb|AFK46018.1| unknown [Lotus japonicus]                              120   8e-25
ref|XP_001763151.1| predicted protein [Physcomitrella patens sub...   119   2e-24
sp|Q7F8R0.1|C3H14_ORYSJ RecName: Full=Zinc finger CCCH domain-co...   116   9e-24
ref|NP_001046176.2| Os02g0194200 [Oryza sativa Japonica Group] g...   116   9e-24

>ref|XP_001764219.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162684659|gb|EDQ71060.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 288

 Score =  129 bits (323), Expect = 2e-27
 Identities = 71/156 (45%), Positives = 81/156 (51%), Gaps = 18/156 (11%)
 Frame = -3

Query: 939 RDVGQQSFSPAGKPKPCMKFFSTSGCPFGESCHFLHYVPGGXXXXXXXXXXXXXXXXXXA 760
           R + Q   +   K KPC KFFSTSGCP+GE CHFLH VPGG                   
Sbjct: 1   RQIEQPVSALGSKTKPCTKFFSTSGCPYGEGCHFLHCVPGGIAALGLMPLGVAVGTPTAL 60

Query: 759 ---------------NQRKPAGPGG--DPSVTVNGFKTKLCNKFKTAEGCRFGDKCHFAH 631
                          N   P  PGG  DPSVTV G+KT+LCNKF T EGCRFGDKCHFAH
Sbjct: 61  TPTSGMRTVMGGFGPNSSTPL-PGGSPDPSVTVGGYKTRLCNKFSTPEGCRFGDKCHFAH 119

Query: 630 GESDLRPAN-NLSRGNRRPMSNGPSPAFSNRPNPAG 526
           GESDLRP+N   + G    +    +  +   P P G
Sbjct: 120 GESDLRPSNAAYANGGTHLLPPVATAIYYGEPTPPG 155


>gb|AFK46018.1| unknown [Lotus japonicus]
          Length = 296

 Score =  120 bits (300), Expect = 8e-25
 Identities = 67/162 (41%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
 Frame = -3

Query: 996 KRPRSEFDGPGFRH---LAADGRDVGQQSFSPAGKPKPCMKFFSTSGCPFGESCHFLHYV 826
           KR R E   PGF     +    +++   S     K KPC KFFST+GCPFGESCHFLH V
Sbjct: 5   KRGRPE---PGFNSNGGIKKSKQELESLSSGVGSKSKPCTKFFSTAGCPFGESCHFLHNV 61

Query: 825 PGGXXXXXXXXXXXXXXXXXXANQRKPAGPGGDPSVTVNGFKTKLCNKFKTAEGCRFGDK 646
           PGG                   N   P  P   P+ +    KT++CNKF TAEGC+FGDK
Sbjct: 62  PGGYNAVAHMMNLAPSAQAPPRNVAAPPPPV--PNGSTPAVKTRICNKFNTAEGCKFGDK 119

Query: 645 CHFAHGESDLRPANNLSRGNRRPMSNGPSPAFSNRPNPAGSP 520
           CHFAHGE +L      S  + RP+ + P+     R  P   P
Sbjct: 120 CHFAHGEWELGKHIAPSFDDHRPIGHAPAGRIGGRMEPPPGP 161


>ref|XP_001763151.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162685634|gb|EDQ72028.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 306

 Score =  119 bits (297), Expect = 2e-24
 Identities = 57/120 (47%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
 Frame = -3

Query: 936 DVGQQSFSPAGKPKPCMKFFSTSGCPFGESCHFLHYVPGGXXXXXXXXXXXXXXXXXXAN 757
           +V  +  S   + KPC KFFSTSGCP+GE CHFLH+VPGG                    
Sbjct: 39  NVDNKDGSSGNRTKPCTKFFSTSGCPYGEGCHFLHFVPGGVQSMGGLAPLANISSMGGGG 98

Query: 756 QRKPAGPGG--DPSVTVNGFKTKLCNKFKTAEGCRFGDKCHFAHGESDLRPANNLSRGNR 583
            RK  G  G  D    + GFKT+LCN+F T EGCRF DKCHFAHGE +LR   +   G R
Sbjct: 99  ARKVVGGVGLDDQGANLGGFKTRLCNRFDTPEGCRFSDKCHFAHGEKELRKFGSGGPGGR 158


>sp|Q7F8R0.1|C3H14_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 14;
           Short=OsC3H14 gi|46389843|dbj|BAD15406.1| KH
           domain-containing protein-like [Oryza sativa Japonica
           Group] gi|125538455|gb|EAY84850.1| hypothetical protein
           OsI_06216 [Oryza sativa Indica Group]
           gi|125581141|gb|EAZ22072.1| hypothetical protein
           OsJ_05736 [Oryza sativa Japonica Group]
           gi|215769037|dbj|BAH01266.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 300

 Score =  116 bits (291), Expect = 9e-24
 Identities = 65/138 (47%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
 Frame = -3

Query: 903 KPKPCMKFFSTSGCPFGESCHFLHYVPGGXXXXXXXXXXXXXXXXXXANQRKPAG---PG 733
           K KPC KFFSTSGCPFGE CHFLH+ PGG                     R P G   P 
Sbjct: 35  KSKPCTKFFSTSGCPFGEGCHFLHHFPGGYQAVAKMTNLGGPAIAPPPG-RMPMGNAVPD 93

Query: 732 GDPSVTVNGFKTKLCNKFKTAEGCRFGDKCHFAHGESDLRPANNLSRGNRRPMSNGPSPA 553
           G P+ TV   KT+LCNK+ TAEGC++GDKCHFAHGE +L     +      PM  GP P 
Sbjct: 94  GPPTPTV---KTRLCNKYNTAEGCKWGDKCHFAHGERELGKPMLMDSSMPPPM--GPRPT 148

Query: 552 FSNRPNPAGSPTPSVSEP 499
               P P   P+P++S P
Sbjct: 149 GHFAPPP--MPSPAMSTP 164


>ref|NP_001046176.2| Os02g0194200 [Oryza sativa Japonica Group]
           gi|255670684|dbj|BAF08090.2| Os02g0194200, partial
           [Oryza sativa Japonica Group]
          Length = 281

 Score =  116 bits (291), Expect = 9e-24
 Identities = 65/138 (47%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
 Frame = -3

Query: 903 KPKPCMKFFSTSGCPFGESCHFLHYVPGGXXXXXXXXXXXXXXXXXXANQRKPAG---PG 733
           K KPC KFFSTSGCPFGE CHFLH+ PGG                     R P G   P 
Sbjct: 16  KSKPCTKFFSTSGCPFGEGCHFLHHFPGGYQAVAKMTNLGGPAIAPPPG-RMPMGNAVPD 74

Query: 732 GDPSVTVNGFKTKLCNKFKTAEGCRFGDKCHFAHGESDLRPANNLSRGNRRPMSNGPSPA 553
           G P+ TV   KT+LCNK+ TAEGC++GDKCHFAHGE +L     +      PM  GP P 
Sbjct: 75  GPPTPTV---KTRLCNKYNTAEGCKWGDKCHFAHGERELGKPMLMDSSMPPPM--GPRPT 129

Query: 552 FSNRPNPAGSPTPSVSEP 499
               P P   P+P++S P
Sbjct: 130 GHFAPPP--MPSPAMSTP 145


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