BLASTX nr result

ID: Dioscorea21_contig00025708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025708
         (959 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66198.1| hypothetical protein [Beta vulgaris subsp. vulga...   114   4e-23
ref|XP_002451167.1| hypothetical protein SORBIDRAFT_05g025250 [S...   112   2e-22
gb|EEE51773.1| hypothetical protein OsJ_33218 [Oryza sativa Japo...   112   2e-22
gb|ABA99487.1| retrotransposon protein, putative, unclassified [...   107   3e-21
emb|CAD41785.1| OSJNBa0035M09.1 [Oryza sativa Japonica Group] gi...   107   4e-21

>emb|CCA66198.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score =  114 bits (284), Expect = 4e-23
 Identities = 77/249 (30%), Positives = 121/249 (48%), Gaps = 14/249 (5%)
 Frame = +2

Query: 137  IRNGANSSFWFDRWLDGHSPKDNWPSLLRDCLFPDISIQ----------HFILAINHPDT 286
            + NG ++ FW D W+D  + K  +P L      P   +            +++  +    
Sbjct: 930  VSNGESTRFWHDIWIDNSALKFQFPRLFLIAEQPLAVVSSMGQFQGNEWRWLIPWSRELR 989

Query: 287  LFGSFSTDSISTILNALPDCSIDLEDSYSWPLEKNGIFLVKSFYSFLIDG-GLR-SQLHP 460
                   +++ ++L  +   S + ED   W  +K+GIF VKSFYS L    GL   ++ P
Sbjct: 990  SRDQVEWETLCSLLQNIK-ISKEGEDVLIWRHDKSGIFSVKSFYSKLSQSSGLTVERVVP 1048

Query: 461  RFWKVKTPSKITLFCWLVGENKIHTLVNLSLKGCNPNGSDTCFLCHNNSESVEHLFLSCA 640
            R WK   P +I +F WL    +I+T   LS  G  P     C LC + +E V HLFL C 
Sbjct: 1049 RLWKGLVPYRIEVFFWLALLERINTKNKLSRLGIIPPEDTMCPLCSSWAEDVAHLFLFCP 1108

Query: 641  FSDRLWSMFLHLYP-STPPPSSVLSIWTSW-IPSLNPNVRNYWDLTSRAIIWTLWLERNN 814
            ++  +W  +L ++  +   PSS++  +  W  PS N   +  W  + + I+W+LW ERN 
Sbjct: 1109 YAREIWGWWLKIWNLNWVWPSSLVLAFEQWSFPSANKLFKKVWAASFQIIVWSLWKERNA 1168

Query: 815  RIFNSKLLP 841
            RIFN+K  P
Sbjct: 1169 RIFNNKASP 1177


>ref|XP_002451167.1| hypothetical protein SORBIDRAFT_05g025250 [Sorghum bicolor]
           gi|241937010|gb|EES10155.1| hypothetical protein
           SORBIDRAFT_05g025250 [Sorghum bicolor]
          Length = 298

 Score =  112 bits (279), Expect = 2e-22
 Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 5/235 (2%)
 Frame = +2

Query: 137 IRNGANSSFWFDRWLDGHSPKDNWPSLLRDCLFPDISIQHFI----LAINHPDTLFGSFS 304
           +++G+ + FW D WL     KD +PSL         S+   +    L I+    L G+  
Sbjct: 8   VKDGSQTRFWLDTWLGNKPLKDRFPSLFNIVRRKQDSVAQILGSSPLNISFRRNLVGTNL 67

Query: 305 TDSISTILNALPDCSI-DLEDSYSWPLEKNGIFLVKSFYSFLIDGGLRSQLHPRFWKVKT 481
            D    I+ +L D ++ +  D + W L  +G F VKS Y+ LI+ G+R  +    W++K 
Sbjct: 68  RDR-HKIVASLQDVNLYEQRDVFVWALHSSGSFSVKSMYAALINNGVR--MSQDIWQIKV 124

Query: 482 PSKITLFCWLVGENKIHTLVNLSLKGCNPNGSDTCFLCHNNSESVEHLFLSCAFSDRLWS 661
           P+KI +F W + +  I T  NL  +  N  G   C  CH+  E++ HLF+ C F   LW 
Sbjct: 125 PTKIKIFLWYLKKGVILTKDNLVRRRWN--GDTKCCFCHS-PETIHHLFMDCLFVKFLWR 181

Query: 662 MFLHLYPSTPPPSSVLSIWTSWIPSLNPNVRNYWDLTSRAIIWTLWLERNNRIFN 826
             +HL     PP  +  ++  W    N          + A+ W +WL RN  +F+
Sbjct: 182 A-VHLLFGIAPPQGIDDLFNRWSKRANKKYNTLLLTAASALCWAVWLTRNEVVFD 235


>gb|EEE51773.1| hypothetical protein OsJ_33218 [Oryza sativa Japonica Group]
          Length = 378

 Score =  112 bits (279), Expect = 2e-22
 Identities = 73/245 (29%), Positives = 120/245 (48%), Gaps = 8/245 (3%)
 Frame = +2

Query: 137 IRNGANSSFWFDRWLDGHSPKDNWPSLLRDCLFPDISIQHFILAINHPDTLFGSFSTDSI 316
           I++G+   FW D+WL   + K+ +P L         ++       N+P +   S+  D I
Sbjct: 117 IKDGSQIRFWEDKWLGNSTLKEQYPYLYNIVRHKHATVAQVFE--NNPPSF--SWRRDLI 172

Query: 317 STIL----NALPDCS----IDLEDSYSWPLEKNGIFLVKSFYSFLIDGGLRSQLHPRFWK 472
            + L    N LP  +       +D + W L  NG F VKS Y  LI   + + ++   WK
Sbjct: 173 GSKLAAWNNLLPRITGFHLTQEQDEFHWNLTSNGEFSVKSHYLALIHSNVPN-INNCLWK 231

Query: 473 VKTPSKITLFCWLVGENKIHTLVNLSLKGCNPNGSDTCFLCHNNSESVEHLFLSCAFSDR 652
           +K P K+ +F W +    + T  NL  +    N  + CF C  N E++ HLF  C F+  
Sbjct: 232 LKIPLKVKIFLWYLRRGMVLTKDNLIKRKWQGN-KNCCFCC--NDETIRHLFFECRFALS 288

Query: 653 LWSMFLHLYPSTPPPSSVLSIWTSWIPSLNPNVRNYWDLTSRAIIWTLWLERNNRIFNSK 832
           +WS+ +      PPP  V  ++ SW+  ++ N++++  L + A  W+LWL RNN +F+ K
Sbjct: 289 VWSI-IQAASGLPPPHCVAHMFGSWLDGIHNNLKSHVLLGAAATCWSLWLCRNNVVFDKK 347

Query: 833 LLPIH 847
              +H
Sbjct: 348 KSYLH 352


>gb|ABA99487.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1627

 Score =  107 bits (268), Expect = 3e-21
 Identities = 80/276 (28%), Positives = 128/276 (46%), Gaps = 7/276 (2%)
 Frame = +2

Query: 80   FWAGITAILPAFRTCISKTIRNGANSSFWFDRWLDGHSPKDNWPSLLRDCLFPDISIQHF 259
            FW+ +  I   F     K + NG ++ FW D W  G   K++ P L    L  ++++   
Sbjct: 1340 FWSSLMEIKELFLRFCDKKVENGESTLFWEDSWWGGKPIKESAPDLYNITLTKNVTVAEI 1399

Query: 260  ----ILAINHPDTLFGSFSTDSISTILNALPDCSIDLE-DSYSWPLEKNGIFLVKSFYSF 424
                + +I     +  +      + I  AL + S+  E D   W L   G F VKSFY  
Sbjct: 1400 KRRGLGSIKFRRDI-NAVKQRKWANIGRALDNVSLTNEKDRLIWRLSSKG-FSVKSFYRA 1457

Query: 425  LIDGGLRSQLHPRFWKVKTPSKITLFCWLVGENKIHTLVNLSLKGCNPNGSDTCFLCHNN 604
            LI  G+ +  + + WK+K P ++ +F WLV  N I T  NL  +G    GS  C  C + 
Sbjct: 1458 LILQGI-NYPYKKMWKIKAPPRVKVFSWLVLRNSILTKDNLFKRGWR-KGSIKCQFC-DK 1514

Query: 605  SESVEHLFLSCAFSDRLWSMFLHLYPSTPPPSSVLSIWTSWIPSLNPNVRNYWDLTSRAI 784
            SES++HLFL C  +  +WS+ +    +  P  +V  +++SWI            +   A+
Sbjct: 1515 SESIQHLFLDCPMAHFIWSV-VECTLNVKPGRNVGEMFSSWILKFGKGNGKLIMVGVTAV 1573

Query: 785  IWTLWLERNNRIFNSKLLPIH--SIFCKAANTLLSW 886
            +WT+W  RN   F+  ++P+    I     + L SW
Sbjct: 1574 LWTIWKARNRACFDG-IMPVDPIEIIYNICSNLNSW 1608


>emb|CAD41785.1| OSJNBa0035M09.1 [Oryza sativa Japonica Group]
            gi|38346911|emb|CAE03883.2| OSJNBb0015N08.11 [Oryza
            sativa Japonica Group]
          Length = 1026

 Score =  107 bits (267), Expect = 4e-21
 Identities = 86/306 (28%), Positives = 137/306 (44%), Gaps = 15/306 (4%)
 Frame = +2

Query: 80   FWAGITAILPAFRTCISKTIRNGANSSFWFDRWLDGHSPKDNWPSLLRDCLFPDISIQHF 259
            FW G+  +   F +  +K + NG  + FW D WL G      +PSL    +   I+I   
Sbjct: 712  FWQGVMEVKDDFFSFCTKIVGNGEKTLFWEDSWLGGKPLAIQFPSLYGIVITKRITIADL 771

Query: 260  ----ILAINHPDTLFGSFSTDSISTI-----LNALPDCSIDLEDSYSWPLEKNGIFLVKS 412
                I  +     L G    D    +     LN + +C    +D   W L K+G F V+S
Sbjct: 772  NRKGIDCMKFRRDLHGDKLRDWRKIVNSWEGLNLVENC----KDKLWWTLSKDGKFTVRS 827

Query: 413  FYSFLIDGGLRSQLHP--RFWKVKTPSKITLFCWLVGENKIHTLVNLSLKGCNPNGSDTC 586
            FY  L    L+    P  + WK + P KI +F W   +NKI T  NL  +G    G + C
Sbjct: 828  FYRAL---KLQQTSFPNKKIWKFRVPLKIRIFIWFFTKNKILTKDNLLKRGWR-KGDNKC 883

Query: 587  FLCHNNSESVEHLFLSCAFSDRLWSMFLHLYPSTPPPSSVLSIWTSWIPSLNPNVRNYWD 766
              C +  E+V+HLF  C  +  +W++ +    +  P  S   ++ SWI S++   +N   
Sbjct: 884  QFC-DKVETVQHLFFDCPLARLIWNI-IACALNVKPVLSRQDLFGSWIQSMDKFTKNLVI 941

Query: 767  LTSRAIIWTLWLERNNRIFNSKLL--PIHSIFCKAANTLLSW--LSTDPDVPANVEAANR 934
            +   A++W++W  RN   F  KL   PI  ++  A N + SW  L        N++   R
Sbjct: 942  VGIAAVLWSIWKCRNKACFERKLPNDPIELVYL-ACNWVDSWAILQKQEASRRNLQLGTR 1000

Query: 935  IKRSIS 952
            + + ++
Sbjct: 1001 LLKQVA 1006