BLASTX nr result
ID: Dioscorea21_contig00025705
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00025705
(1778 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267875.1| PREDICTED: ATP-dependent DNA helicase 2 subu... 763 0.0
dbj|BAF03493.1| Ku70 homolog [Populus nigra] 760 0.0
ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus commu... 757 0.0
ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|2... 740 0.0
ref|NP_001059061.1| Os07g0184900 [Oryza sativa Japonica Group] g... 738 0.0
>ref|XP_002267875.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70 [Vitis vinifera]
gi|296089629|emb|CBI39448.3| unnamed protein product
[Vitis vinifera]
Length = 623
Score = 763 bits (1971), Expect = 0.0
Identities = 375/523 (71%), Positives = 448/523 (85%)
Frame = -3
Query: 1773 DREFLDQPTAKLIKEFSCIEGTFMSNIGSQYGIIPGSRENSLYSALWVAQALLRKGSPKS 1594
+RE+LD+PTA+LIKEF IE FM IGSQYGI+ GSRENSLY+ALW AQALLRKGS K+
Sbjct: 104 EREYLDRPTARLIKEFDRIEELFMKEIGSQYGIMSGSRENSLYNALWAAQALLRKGSAKT 163
Query: 1593 VSKRILVFTNEDNPFGNITGAAKTDMIRTTVQRAYDAQEMGISIEILPLSIPDEPFNVSH 1414
KRIL+FTNED+PFG+ITGA K DM RTT+QRA D Q++GISIE+LPLS PDE FNVS
Sbjct: 164 ADKRILLFTNEDDPFGSITGATKMDMTRTTLQRAKDTQDLGISIELLPLSCPDEEFNVSA 223
Query: 1413 FYADLIGLEGDEVAQFLPSAVERLEDMTDQLTKRIFKKRIVRTIPFSIAKGINIEVNTYA 1234
FYADLIGLEGD++A F+PS ++L DM +QL KR+FKKR+VR I FSI KG++IE+NTYA
Sbjct: 224 FYADLIGLEGDDLALFMPSVGDKLTDMKNQLRKRMFKKRVVRRITFSIVKGLSIELNTYA 283
Query: 1233 LIRPALPGSVTWLDSVTNHSLKAERSFICADTGALVHEPPKRFHPYKNENVKFSVDELSE 1054
LIRP +PG++TWLDS+TN LK ERSFICADTGALV +P KRFHPYKN+NVKF+ +ELSE
Sbjct: 284 LIRPTVPGTITWLDSITNLPLKTERSFICADTGALV-QPTKRFHPYKNKNVKFTTEELSE 342
Query: 1053 IKKISNGHLCLLGFKPLDLLKDYHNLKPSTFIFPTDEAIIGSTQIFIALHRSMLQLKRFA 874
+K+IS GHL LLGFKPL LKDYHNL+PSTF+FPTD+ ++GST IFIALHRSML+LKRFA
Sbjct: 343 VKRISTGHLRLLGFKPLSCLKDYHNLRPSTFVFPTDKEVVGSTCIFIALHRSMLRLKRFA 402
Query: 873 LAFYGGSANPRLVALVAQDEVTSSSGQVEPPGMHMIYLPFSDDIRHVEELQTTADADVPH 694
+AFYGGSA+P+LVALVAQDE+ + QVEPPGMHMIYLP+SDDIRH+EEL + P
Sbjct: 403 VAFYGGSAHPQLVALVAQDEIIAGGVQVEPPGMHMIYLPYSDDIRHIEELHSDITVPTPR 462
Query: 693 ATDDQIKKASVLMKRMELKDFSVCQFANPALQRHYGILQALALGEDEMPDIKDETLPDED 514
ATDDQIKKA+ LM+R++LKDFSVCQFANPALQRHY +LQALAL EDEMP+IKDETLPDE+
Sbjct: 463 ATDDQIKKATALMRRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEIKDETLPDEE 522
Query: 513 GMARPTIVNALEDFKIAVYGENHDLEEVSSKKSSGTDASRKRKAMVEAALESAANHDWAD 334
GMARP +VNALE+FK +VYGEN++ E+ K+S DAS+KRKA+ E A++ +A +DWAD
Sbjct: 523 GMARPGVVNALEEFKKSVYGENYNEEDEGHGKAS--DASKKRKAVAENAVKESAKYDWAD 580
Query: 333 LADNGKLKDLTVPELKNYLTAHNIPVTGKKEALISRILTHLGR 205
LADNG+LKDLT ELK YLTAHN+ V GKKE LISRILTH+G+
Sbjct: 581 LADNGRLKDLTTVELKYYLTAHNLAVGGKKEVLISRILTHMGK 623
>dbj|BAF03493.1| Ku70 homolog [Populus nigra]
Length = 627
Score = 760 bits (1962), Expect = 0.0
Identities = 370/523 (70%), Positives = 446/523 (85%)
Frame = -3
Query: 1773 DREFLDQPTAKLIKEFSCIEGTFMSNIGSQYGIIPGSRENSLYSALWVAQALLRKGSPKS 1594
+RE+LD+PTA+LIK+F CIE +F +IGSQYGI+ GSRENSLY+ALW+AQALLRKGS K+
Sbjct: 106 EREYLDRPTARLIKDFDCIEESFTKDIGSQYGIVSGSRENSLYNALWIAQALLRKGSAKT 165
Query: 1593 VSKRILVFTNEDNPFGNITGAAKTDMIRTTVQRAYDAQEMGISIEILPLSIPDEPFNVSH 1414
KRIL+FTNED+PFG+I G AK DM RTT+QRA DAQ++GISIE+LPLS PDE FNVS
Sbjct: 166 ADKRILLFTNEDDPFGSIKGVAKADMTRTTLQRAKDAQDLGISIELLPLSQPDEEFNVSL 225
Query: 1413 FYADLIGLEGDEVAQFLPSAVERLEDMTDQLTKRIFKKRIVRTIPFSIAKGINIEVNTYA 1234
FY+DLIGLEGDE+AQF+PSA ++L+DM DQL KR+F KRIVR I SIA G++IE+NTYA
Sbjct: 226 FYSDLIGLEGDELAQFMPSAGQKLQDMKDQLRKRMFTKRIVRRITLSIANGLSIELNTYA 285
Query: 1233 LIRPALPGSVTWLDSVTNHSLKAERSFICADTGALVHEPPKRFHPYKNENVKFSVDELSE 1054
LIRP LPG++TWLDSVTN LK ERSFICADTGAL+ EP KR+ PYKN+N+ SV+ELSE
Sbjct: 286 LIRPTLPGAITWLDSVTNRPLKTERSFICADTGALMQEPAKRYQPYKNDNIMLSVEELSE 345
Query: 1053 IKKISNGHLCLLGFKPLDLLKDYHNLKPSTFIFPTDEAIIGSTQIFIALHRSMLQLKRFA 874
IK++S GHL LLGFKPL LKDYHNL+PSTFIFP+D+ +IGST IFIAL RSM+ LKRFA
Sbjct: 346 IKRVSMGHLHLLGFKPLSCLKDYHNLRPSTFIFPSDKEVIGSTCIFIALLRSMVNLKRFA 405
Query: 873 LAFYGGSANPRLVALVAQDEVTSSSGQVEPPGMHMIYLPFSDDIRHVEELQTTADADVPH 694
+AFYG S+ P+LVALVAQDE+ S+ GQVEPPGMHMIYLP+SDD+RHVEE+ + +A P
Sbjct: 406 VAFYGSSSRPQLVALVAQDEIISAGGQVEPPGMHMIYLPYSDDVRHVEEIHSDTNAGAPR 465
Query: 693 ATDDQIKKASVLMKRMELKDFSVCQFANPALQRHYGILQALALGEDEMPDIKDETLPDED 514
ATD+QIKKA+ L+KR++LKDFSV QFANP LQRHY +LQALAL ED+MP+I DETLPDE+
Sbjct: 466 ATDEQIKKAAALIKRIDLKDFSVFQFANPGLQRHYAVLQALALDEDDMPEINDETLPDEE 525
Query: 513 GMARPTIVNALEDFKIAVYGENHDLEEVSSKKSSGTDASRKRKAMVEAALESAANHDWAD 334
GMARP +V A+E+FK++VYGEN+D EE +DAS+KRK VE A + +AN++W D
Sbjct: 526 GMARPGVVKAVEEFKLSVYGENYD-EESDMGNGKASDASKKRKTAVENAAKESANYNWPD 584
Query: 333 LADNGKLKDLTVPELKNYLTAHNIPVTGKKEALISRILTHLGR 205
LADNG+LKDLTV ELK YLTAHN+PVTGKKE LISRILTHLG+
Sbjct: 585 LADNGQLKDLTVTELKYYLTAHNLPVTGKKEVLISRILTHLGK 627
>ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus communis]
gi|223539210|gb|EEF40803.1| ku P70 DNA helicase, putative
[Ricinus communis]
Length = 626
Score = 757 bits (1955), Expect = 0.0
Identities = 370/523 (70%), Positives = 445/523 (85%)
Frame = -3
Query: 1773 DREFLDQPTAKLIKEFSCIEGTFMSNIGSQYGIIPGSRENSLYSALWVAQALLRKGSPKS 1594
+RE+LD+PTA+LIK+F CIE +FM IGSQYGI+ GSRENSLY+ALWVAQALLRKGS K+
Sbjct: 106 EREYLDRPTARLIKDFDCIEESFMKEIGSQYGIVSGSRENSLYNALWVAQALLRKGSAKT 165
Query: 1593 VSKRILVFTNEDNPFGNITGAAKTDMIRTTVQRAYDAQEMGISIEILPLSIPDEPFNVSH 1414
KRIL+ TNED+PFG++ GAAKTDM RTT+QRA DAQ++GISIE+LPLS PDE F++S
Sbjct: 166 ADKRILLLTNEDDPFGSMQGAAKTDMTRTTLQRAKDAQDLGISIELLPLSQPDEEFHISL 225
Query: 1413 FYADLIGLEGDEVAQFLPSAVERLEDMTDQLTKRIFKKRIVRTIPFSIAKGINIEVNTYA 1234
FYA LIGLEGDE+AQF+PSA ++LEDM DQL KR+F KRIVR I IA G++I++NTYA
Sbjct: 226 FYAGLIGLEGDELAQFVPSAGQKLEDMKDQLRKRMFTKRIVRKITLFIA-GLSIDLNTYA 284
Query: 1233 LIRPALPGSVTWLDSVTNHSLKAERSFICADTGALVHEPPKRFHPYKNENVKFSVDELSE 1054
LIRP PG++TWLDSVTN LK ERSFICADTGAL+ EP K HPYKNEN+KFSV+EL+E
Sbjct: 285 LIRPTTPGAITWLDSVTNRPLKTERSFICADTGALILEPTKLSHPYKNENIKFSVEELAE 344
Query: 1053 IKKISNGHLCLLGFKPLDLLKDYHNLKPSTFIFPTDEAIIGSTQIFIALHRSMLQLKRFA 874
IK+IS GHL LLGFKPL L+DYHNL+PSTF+FP+D+ +IGST IFIALHRSML+L RFA
Sbjct: 345 IKRISTGHLRLLGFKPLSCLRDYHNLRPSTFVFPSDKEVIGSTSIFIALHRSMLRLNRFA 404
Query: 873 LAFYGGSANPRLVALVAQDEVTSSSGQVEPPGMHMIYLPFSDDIRHVEELQTTADADVPH 694
+AFYGGS++PRLVALVAQDE+ S+ GQ+EPPGMHMIYLP+SDD+RH+EE + ++ +PH
Sbjct: 405 VAFYGGSSHPRLVALVAQDEIVSAGGQIEPPGMHMIYLPYSDDVRHIEEFHSESNVGLPH 464
Query: 693 ATDDQIKKASVLMKRMELKDFSVCQFANPALQRHYGILQALALGEDEMPDIKDETLPDED 514
A DQ KKA+ L+KR++LKDFSVCQFANPALQRHY +LQALAL EDEMP+ KDETLPDE+
Sbjct: 465 ANGDQTKKAAGLIKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPESKDETLPDEE 524
Query: 513 GMARPTIVNALEDFKIAVYGENHDLEEVSSKKSSGTDASRKRKAMVEAALESAANHDWAD 334
G+ARP +V A+E+FK++VYG+ +D EE + SRKRKA E A +AN+DWAD
Sbjct: 525 GLARPGVVKAIEEFKLSVYGDKYD-EENLLGNGKANETSRKRKAAAENAKNESANYDWAD 583
Query: 333 LADNGKLKDLTVPELKNYLTAHNIPVTGKKEALISRILTHLGR 205
LADNGKLKDLTV ELK YLTAHNIPV GKKEALIS+ILTHLG+
Sbjct: 584 LADNGKLKDLTVAELKLYLTAHNIPVAGKKEALISKILTHLGK 626
>ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|222860512|gb|EEE98059.1|
predicted protein [Populus trichocarpa]
Length = 628
Score = 740 bits (1911), Expect = 0.0
Identities = 363/524 (69%), Positives = 442/524 (84%), Gaps = 1/524 (0%)
Frame = -3
Query: 1773 DREFLDQPTAKLIKEFSCIEGTFMSNIGSQYGIIPGSRENSLYSALWVAQALLRKGSPKS 1594
+RE+LD+PTA+LIK+F CIE +F +IGSQYGI+ GSRENSLY+ALW+AQALLRKGS K+
Sbjct: 106 EREYLDRPTARLIKDFDCIEESFTKDIGSQYGIVSGSRENSLYNALWIAQALLRKGSAKT 165
Query: 1593 VSKRILVFTNEDNPFGNITGAAKTDMIRTTVQRAYDAQEMGISIEILPLSIPDEPFNVSH 1414
KRIL+FTNED+PFG+I G AK DM RTT+QRA DAQ++GISIE+LPLS PDE FNVS
Sbjct: 166 ADKRILLFTNEDDPFGSIKGVAKADMTRTTLQRAKDAQDLGISIELLPLSQPDEEFNVSL 225
Query: 1413 FYADLIGLEGDEVAQFLPSAVERLEDMTDQLTKRIFKKRIVRTIPFSIAKGINIEVNTYA 1234
FY+DLIGLEGDE+AQF+PSA ++L+DM DQL KR+F KRIVR I SIA G++IE+NTYA
Sbjct: 226 FYSDLIGLEGDELAQFMPSAGQKLQDMKDQLRKRMFTKRIVRRITLSIANGLSIELNTYA 285
Query: 1233 LIRPALPGSVTWLDSVTNHSLKAERSFICADTGALVHEPPKRFHPYKNENVKFSVDELSE 1054
LIRP LPG++TWLDSV+N LK ERSFICADTGAL+ EP KR+ PYKN+N+ SV+ELSE
Sbjct: 286 LIRPTLPGAITWLDSVSNRPLKTERSFICADTGALMQEPAKRYQPYKNDNIMLSVEELSE 345
Query: 1053 IKKISNGHLCLLGFKPLDLLKDYHNLKPSTFIFPTDEAIIGSTQIFIALHRSMLQLKRFA 874
IK++S GHL LLGFKPL LKDYHNL+PSTFIFP+D+ +IGST IFIAL RSM+ LKRFA
Sbjct: 346 IKRVSTGHLHLLGFKPLSCLKDYHNLRPSTFIFPSDKEVIGSTCIFIALLRSMVNLKRFA 405
Query: 873 LAFYGGSANPRLVALVAQDEVTSSSGQVEPPGMHMIYLPFSDD-IRHVEELQTTADADVP 697
+AFYG S+ P+LVALVAQDE+ S+ GQVEPPGMHMIYLP+SDD + + ++ + +A P
Sbjct: 406 VAFYGSSSRPQLVALVAQDEIISAGGQVEPPGMHMIYLPYSDDGMVDLLQIHSDTNAGAP 465
Query: 696 HATDDQIKKASVLMKRMELKDFSVCQFANPALQRHYGILQALALGEDEMPDIKDETLPDE 517
ATD+QIKKA+ L+KR++LKDFSV QFANP LQRHY +LQALAL ED+MP+I DETLPDE
Sbjct: 466 RATDEQIKKAAALIKRIDLKDFSVFQFANPGLQRHYAVLQALALDEDDMPEINDETLPDE 525
Query: 516 DGMARPTIVNALEDFKIAVYGENHDLEEVSSKKSSGTDASRKRKAMVEAALESAANHDWA 337
+GMARP +V A+E+FK++VYGEN+D EE +DAS+KRK E A + +AN++W
Sbjct: 526 EGMARPGVVKAVEEFKLSVYGENYD-EESDMGSGKASDASKKRKTAAENAAKESANYNWP 584
Query: 336 DLADNGKLKDLTVPELKNYLTAHNIPVTGKKEALISRILTHLGR 205
DLADNG+LKDLTV ELK YLTAHN+PVTGKKE LISRILTHLG+
Sbjct: 585 DLADNGQLKDLTVTELKYYLTAHNLPVTGKKEVLISRILTHLGK 628
>ref|NP_001059061.1| Os07g0184900 [Oryza sativa Japonica Group]
gi|75139246|sp|Q7F1M0.1|KU70_ORYSJ RecName:
Full=ATP-dependent DNA helicase 2 subunit KU70;
Short=OsKU70; AltName: Full=ATP-dependent DNA helicase 2
subunit 1; AltName: Full=ATP-dependent DNA helicase II 70
kDa subunit gi|34393279|dbj|BAC83189.1| putative
ATP-dependent DNA helicase II 70 kDa subunit [Oryza
sativa Japonica Group] gi|113610597|dbj|BAF20975.1|
Os07g0184900 [Oryza sativa Japonica Group]
gi|215717008|dbj|BAG95371.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 624
Score = 738 bits (1904), Expect = 0.0
Identities = 356/523 (68%), Positives = 448/523 (85%)
Frame = -3
Query: 1773 DREFLDQPTAKLIKEFSCIEGTFMSNIGSQYGIIPGSRENSLYSALWVAQALLRKGSPKS 1594
+RE LD+P A+LIKEFSCIE +FMSNIGS+YGI GSREN+LY+ALWVAQALLRKGS K+
Sbjct: 104 EREPLDRPDARLIKEFSCIEDSFMSNIGSRYGITSGSRENTLYNALWVAQALLRKGSVKT 163
Query: 1593 VSKRILVFTNEDNPFGNITGAAKTDMIRTTVQRAYDAQEMGISIEILPLSIPDEPFNVSH 1414
VSKRI++FTNED+PFG +TGA KTDMIRTT+QRA DAQ++G+SIE+LPLS PDE FN+S
Sbjct: 164 VSKRIVIFTNEDDPFGGLTGAVKTDMIRTTIQRARDAQDLGLSIELLPLSRPDEEFNMSL 223
Query: 1413 FYADLIGLEGDEVAQFLPSAVERLEDMTDQLTKRIFKKRIVRTIPFSIAKGINIEVNTYA 1234
FYADLIGLEGDE+ +LPS+ E+LEDMT+QL KR+ KKR V+T+ F+I + IEVNTYA
Sbjct: 224 FYADLIGLEGDEIVDYLPSSGEKLEDMTNQLKKRMMKKRKVKTLAFAITNDVCIEVNTYA 283
Query: 1233 LIRPALPGSVTWLDSVTNHSLKAERSFICADTGALVHEPPKRFHPYKNENVKFSVDELSE 1054
LIR PG++TWLDS++N LKAERSFIC DTGAL+ +P KRF Y ++ VKFS ELS+
Sbjct: 284 LIRSTTPGAITWLDSISNLPLKAERSFICNDTGALIQDPQKRFQVYNDKIVKFSTRELSD 343
Query: 1053 IKKISNGHLCLLGFKPLDLLKDYHNLKPSTFIFPTDEAIIGSTQIFIALHRSMLQLKRFA 874
+K++S+ HL LLGFKPLD LKDYHNL+PSTFI+P+DE I GST++F+ALH SM +L RFA
Sbjct: 344 VKRVSSHHLRLLGFKPLDYLKDYHNLRPSTFIYPSDEQIFGSTRVFVALHSSMRRLGRFA 403
Query: 873 LAFYGGSANPRLVALVAQDEVTSSSGQVEPPGMHMIYLPFSDDIRHVEELQTTADADVPH 694
LAFYG P+LVAL+AQ+EVTS+ GQ+EPPG+HMIYLP+SDD+R+ EE+ T+D D P
Sbjct: 404 LAFYGNPTRPQLVALIAQEEVTSAGGQIEPPGIHMIYLPYSDDVRYPEEVHLTSD-DAPR 462
Query: 693 ATDDQIKKASVLMKRMELKDFSVCQFANPALQRHYGILQALALGEDEMPDIKDETLPDED 514
ATD+QIKKAS L++R++LK+FSVCQF+NPALQRHYGIL+ALALGEDEMPD+KDETLPDE+
Sbjct: 463 ATDEQIKKASNLLRRIDLKNFSVCQFSNPALQRHYGILEALALGEDEMPDVKDETLPDEE 522
Query: 513 GMARPTIVNALEDFKIAVYGENHDLEEVSSKKSSGTDASRKRKAMVEAALESAANHDWAD 334
G+ARP +V A+E+FK +VYGEN+D EE + ++ AS+KRKA+ +AA E +A H+WA+
Sbjct: 523 GLARPVVVKAVEEFKASVYGENYDQEEAEA-AAAKAGASKKRKALTDAAAEKSAAHNWAE 581
Query: 333 LADNGKLKDLTVPELKNYLTAHNIPVTGKKEALISRILTHLGR 205
LAD GKLKD+TV +LK+YL+AH +PV+GKKEAL+SRILTHLG+
Sbjct: 582 LADTGKLKDMTVVDLKSYLSAHGLPVSGKKEALVSRILTHLGK 624