BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025691
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [...   248   3e-64
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...   245   2e-63
emb|CBI31781.3| unnamed protein product [Vitis vinifera]              245   2e-63
ref|NP_194284.2| DNA mismatch repair protein Msh3 [Arabidopsis t...   239   2e-61
dbj|BAD94621.1| putative DNA mismatch repair protein [Arabidopsi...   239   2e-61

>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
            gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
            MSH3, putative [Ricinus communis]
          Length = 1100

 Score =  248 bits (634), Expect = 3e-64
 Identities = 120/158 (75%), Positives = 130/158 (82%)
 Frame = +2

Query: 2    WDRFLMGFGKYYXXXXXXXXXXXXXDCLHSLAILSKTQNYIRPSFVGDEEPVQINICSGR 181
            WD FL  F K+Y             DCLHSLAILSK +NY+RP FV D EPVQI+I SGR
Sbjct: 725  WDSFLRSFAKHYAEFQAVIQALAALDCLHSLAILSKNKNYVRPVFVDDNEPVQIHISSGR 784

Query: 182  HPVLETILRDNFVPNDTCMHADGEYCQIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPAS 361
            HPVLETIL DNFVPNDTC+H DGE+CQ+VTGPNMGGKSCYIRQVALI +MAQVGSFVPAS
Sbjct: 785  HPVLETILLDNFVPNDTCLHVDGEHCQVVTGPNMGGKSCYIRQVALIVMMAQVGSFVPAS 844

Query: 362  SAKLHVLDGIFTRMGLSDSIQQGTSTFFEEISETSHIL 475
            SAKLHVLDGI+TRMG SDSIQQG STF EE+SETSHIL
Sbjct: 845  SAKLHVLDGIYTRMGASDSIQQGRSTFLEELSETSHIL 882


>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score =  245 bits (626), Expect = 2e-63
 Identities = 119/158 (75%), Positives = 131/158 (82%)
 Frame = +2

Query: 2    WDRFLMGFGKYYXXXXXXXXXXXXXDCLHSLAILSKTQNYIRPSFVGDEEPVQINICSGR 181
            WD FL  F KY+             DCLHSLAILS+ +NY+RP FVGD EPVQ++ICSGR
Sbjct: 734  WDSFLRAFDKYFSEFQAAVQALATLDCLHSLAILSRNKNYVRPVFVGDSEPVQMHICSGR 793

Query: 182  HPVLETILRDNFVPNDTCMHADGEYCQIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPAS 361
            HPVLET+L+DNFVPNDT +HADGEYC+IVTGPNMGGKSCYIRQVALIAIMAQVGSFVPAS
Sbjct: 794  HPVLETVLQDNFVPNDTNLHADGEYCEIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPAS 853

Query: 362  SAKLHVLDGIFTRMGLSDSIQQGTSTFFEEISETSHIL 475
            SAKL VLDGI TRMG SDSIQQG STF EE+SE SHI+
Sbjct: 854  SAKLCVLDGIHTRMGSSDSIQQGRSTFLEELSEASHII 891


>emb|CBI31781.3| unnamed protein product [Vitis vinifera]
          Length = 903

 Score =  245 bits (626), Expect = 2e-63
 Identities = 119/158 (75%), Positives = 131/158 (82%)
 Frame = +2

Query: 2    WDRFLMGFGKYYXXXXXXXXXXXXXDCLHSLAILSKTQNYIRPSFVGDEEPVQINICSGR 181
            WD FL  F KY+             DCLHSLAILS+ +NY+RP FVGD EPVQ++ICSGR
Sbjct: 594  WDSFLRAFDKYFSEFQAAVQALATLDCLHSLAILSRNKNYVRPVFVGDSEPVQMHICSGR 653

Query: 182  HPVLETILRDNFVPNDTCMHADGEYCQIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPAS 361
            HPVLET+L+DNFVPNDT +HADGEYC+IVTGPNMGGKSCYIRQVALIAIMAQVGSFVPAS
Sbjct: 654  HPVLETVLQDNFVPNDTNLHADGEYCEIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPAS 713

Query: 362  SAKLHVLDGIFTRMGLSDSIQQGTSTFFEEISETSHIL 475
            SAKL VLDGI TRMG SDSIQQG STF EE+SE SHI+
Sbjct: 714  SAKLCVLDGIHTRMGSSDSIQQGRSTFLEELSEASHII 751


>ref|NP_194284.2| DNA mismatch repair protein Msh3 [Arabidopsis thaliana]
            gi|12644077|sp|O65607.2|MSH3_ARATH RecName: Full=DNA
            mismatch repair protein MSH3; Short=AtMSH3; AltName:
            Full=MutS protein homolog 3 gi|3319876|emb|CAA07684.1|
            Msh3 protein [Arabidopsis thaliana]
            gi|332659675|gb|AEE85075.1| DNA mismatch repair protein
            Msh3 [Arabidopsis thaliana]
          Length = 1081

 Score =  239 bits (609), Expect = 2e-61
 Identities = 114/158 (72%), Positives = 128/158 (81%)
 Frame = +2

Query: 2    WDRFLMGFGKYYXXXXXXXXXXXXXDCLHSLAILSKTQNYIRPSFVGDEEPVQINICSGR 181
            WD FL  F +YY             DCLHSL+ LS+ +NY+RP FV D EPV+INI SGR
Sbjct: 727  WDSFLKSFSRYYTDFKAAVQALAALDCLHSLSTLSRNKNYVRPEFVDDCEPVEINIQSGR 786

Query: 182  HPVLETILRDNFVPNDTCMHADGEYCQIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPAS 361
            HPVLETIL+DNFVPNDT +HA+GEYCQI+TGPNMGGKSCYIRQVALI+IMAQVGSFVPAS
Sbjct: 787  HPVLETILQDNFVPNDTILHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPAS 846

Query: 362  SAKLHVLDGIFTRMGLSDSIQQGTSTFFEEISETSHIL 475
             AKLHVLDG+FTRMG SDSIQ G STF EE+SE SHI+
Sbjct: 847  FAKLHVLDGVFTRMGASDSIQHGRSTFLEELSEASHII 884


>dbj|BAD94621.1| putative DNA mismatch repair protein [Arabidopsis thaliana]
          Length = 386

 Score =  239 bits (609), Expect = 2e-61
 Identities = 114/158 (72%), Positives = 128/158 (81%)
 Frame = +2

Query: 2   WDRFLMGFGKYYXXXXXXXXXXXXXDCLHSLAILSKTQNYIRPSFVGDEEPVQINICSGR 181
           WD FL  F +YY             DCLHSL+ LS+ +NY+RP FV D EPV+INI SGR
Sbjct: 32  WDSFLKSFSRYYTDFKAAVQALAALDCLHSLSTLSRNKNYVRPEFVDDCEPVEINIQSGR 91

Query: 182 HPVLETILRDNFVPNDTCMHADGEYCQIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPAS 361
           HPVLETIL+DNFVPNDT +HA+GEYCQI+TGPNMGGKSCYIRQVALI+IMAQVGSFVPAS
Sbjct: 92  HPVLETILQDNFVPNDTILHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPAS 151

Query: 362 SAKLHVLDGIFTRMGLSDSIQQGTSTFFEEISETSHIL 475
            AKLHVLDG+FTRMG SDSIQ G STF EE+SE SHI+
Sbjct: 152 FAKLHVLDGVFTRMGASDSIQHGRSTFLEELSEASHII 189