BLASTX nr result
ID: Dioscorea21_contig00025678
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00025678 (308 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EEE60736.1| hypothetical protein OsJ_14260 [Oryza sativa Japo... 150 8e-35 ref|NP_001052463.1| Os04g0321600 [Oryza sativa Japonica Group] g... 150 8e-35 ref|XP_002466155.1| hypothetical protein SORBIDRAFT_01g002390 [S... 149 3e-34 gb|ACD46678.1| hypothetical protein [Aegilops tauschii] 147 9e-34 ref|XP_002330007.1| global transcription factor group [Populus t... 146 1e-33 >gb|EEE60736.1| hypothetical protein OsJ_14260 [Oryza sativa Japonica Group] Length = 1056 Score = 150 bits (380), Expect = 8e-35 Identities = 71/102 (69%), Positives = 87/102 (85%) Frame = -1 Query: 308 HFLCSQKKANLLETLRKPAKEAVGADVVIHVRAKNDDGTGLMEEMLRAARTQSKSDSVLV 129 HFLCSQKKANL+ TL+K A +AVGAD+V+HV+AKND G GLME+++RA QSKSD +V Sbjct: 90 HFLCSQKKANLIGTLKKAANDAVGADIVLHVKAKNDSGVGLMEDIVRAVCAQSKSDDPIV 149 Query: 128 GYIAKEAPEGKLLETWSEKLNGSGFQLGDVTNGFSELFAVKD 3 G+IAKEAPEGKLLE W++KL+ S QL D+TNGFSELFA+KD Sbjct: 150 GHIAKEAPEGKLLEAWADKLSSSSVQLTDITNGFSELFAMKD 191 >ref|NP_001052463.1| Os04g0321600 [Oryza sativa Japonica Group] gi|75295962|sp|Q7X923.2|SPT16_ORYSJ RecName: Full=FACT complex subunit SPT16; AltName: Full=Facilitates chromatin transcription complex subunit SPT16 gi|38346977|emb|CAD40293.2| OSJNBb0062H02.2 [Oryza sativa Japonica Group] gi|113564034|dbj|BAF14377.1| Os04g0321600 [Oryza sativa Japonica Group] gi|215768327|dbj|BAH00556.1| unnamed protein product [Oryza sativa Japonica Group] Length = 1056 Score = 150 bits (380), Expect = 8e-35 Identities = 71/102 (69%), Positives = 87/102 (85%) Frame = -1 Query: 308 HFLCSQKKANLLETLRKPAKEAVGADVVIHVRAKNDDGTGLMEEMLRAARTQSKSDSVLV 129 HFLCSQKKANL+ TL+K A +AVGAD+V+HV+AKND G GLME+++RA QSKSD +V Sbjct: 90 HFLCSQKKANLIGTLKKAANDAVGADIVLHVKAKNDSGVGLMEDIVRAVCAQSKSDDPIV 149 Query: 128 GYIAKEAPEGKLLETWSEKLNGSGFQLGDVTNGFSELFAVKD 3 G+IAKEAPEGKLLE W++KL+ S QL D+TNGFSELFA+KD Sbjct: 150 GHIAKEAPEGKLLEAWADKLSSSSVQLTDITNGFSELFAMKD 191 >ref|XP_002466155.1| hypothetical protein SORBIDRAFT_01g002390 [Sorghum bicolor] gi|241920009|gb|EER93153.1| hypothetical protein SORBIDRAFT_01g002390 [Sorghum bicolor] Length = 1054 Score = 149 bits (375), Expect = 3e-34 Identities = 71/102 (69%), Positives = 86/102 (84%) Frame = -1 Query: 308 HFLCSQKKANLLETLRKPAKEAVGADVVIHVRAKNDDGTGLMEEMLRAARTQSKSDSVLV 129 H LCSQKKANL+ TL+K A E+VG D+V+HV+ KN DG LM+ +++AAR QSKSD +V Sbjct: 87 HVLCSQKKANLIGTLKKAANESVGVDIVLHVKTKNGDGADLMDHIVQAARNQSKSDKPVV 146 Query: 128 GYIAKEAPEGKLLETWSEKLNGSGFQLGDVTNGFSELFAVKD 3 G+IAKE PEGKLLETW+EKL+GSG +L DVTNGFSELFAVKD Sbjct: 147 GHIAKEVPEGKLLETWTEKLSGSGVRLTDVTNGFSELFAVKD 188 >gb|ACD46678.1| hypothetical protein [Aegilops tauschii] Length = 1085 Score = 147 bits (371), Expect = 9e-34 Identities = 70/102 (68%), Positives = 86/102 (84%) Frame = -1 Query: 308 HFLCSQKKANLLETLRKPAKEAVGADVVIHVRAKNDDGTGLMEEMLRAARTQSKSDSVLV 129 HFLCSQKKANL+ TL+ A EAVG+D+++HV++KN DG LM+++LRA QSKSD+ +V Sbjct: 88 HFLCSQKKANLIGTLKDAASEAVGSDIILHVKSKNGDGIDLMDDILRAVSAQSKSDTPVV 147 Query: 128 GYIAKEAPEGKLLETWSEKLNGSGFQLGDVTNGFSELFAVKD 3 G+IAKEAPEGKLLETW+EKL G QL DVT+GFSELFAVKD Sbjct: 148 GHIAKEAPEGKLLETWAEKLAGGSVQLADVTHGFSELFAVKD 189 >ref|XP_002330007.1| global transcription factor group [Populus trichocarpa] gi|222871432|gb|EEF08563.1| global transcription factor group [Populus trichocarpa] Length = 1065 Score = 146 bits (369), Expect = 1e-33 Identities = 71/105 (67%), Positives = 88/105 (83%), Gaps = 3/105 (2%) Frame = -1 Query: 308 HFLCSQKKANLLETLRKPAKEAVGADVVIHVRAKNDDGTGLMEEMLRAARTQSKSD---S 138 HFLCSQKKA+LLE ++KPA+E VG DVV+HV+AK D+GTGLME + RA R+QS +D + Sbjct: 92 HFLCSQKKASLLEVVKKPAREVVGVDVVMHVKAKTDNGTGLMEAIFRAIRSQSGADGQVA 151 Query: 137 VLVGYIAKEAPEGKLLETWSEKLNGSGFQLGDVTNGFSELFAVKD 3 +VG+I +EAPEG LLETWSEKL G+GF+L DVTNG S+LFAVKD Sbjct: 152 PVVGHIVREAPEGNLLETWSEKLKGAGFELADVTNGLSDLFAVKD 196