BLASTX nr result

ID: Dioscorea21_contig00025678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025678
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE60736.1| hypothetical protein OsJ_14260 [Oryza sativa Japo...   150   8e-35
ref|NP_001052463.1| Os04g0321600 [Oryza sativa Japonica Group] g...   150   8e-35
ref|XP_002466155.1| hypothetical protein SORBIDRAFT_01g002390 [S...   149   3e-34
gb|ACD46678.1| hypothetical protein [Aegilops tauschii]               147   9e-34
ref|XP_002330007.1| global transcription factor group [Populus t...   146   1e-33

>gb|EEE60736.1| hypothetical protein OsJ_14260 [Oryza sativa Japonica Group]
          Length = 1056

 Score =  150 bits (380), Expect = 8e-35
 Identities = 71/102 (69%), Positives = 87/102 (85%)
 Frame = -1

Query: 308 HFLCSQKKANLLETLRKPAKEAVGADVVIHVRAKNDDGTGLMEEMLRAARTQSKSDSVLV 129
           HFLCSQKKANL+ TL+K A +AVGAD+V+HV+AKND G GLME+++RA   QSKSD  +V
Sbjct: 90  HFLCSQKKANLIGTLKKAANDAVGADIVLHVKAKNDSGVGLMEDIVRAVCAQSKSDDPIV 149

Query: 128 GYIAKEAPEGKLLETWSEKLNGSGFQLGDVTNGFSELFAVKD 3
           G+IAKEAPEGKLLE W++KL+ S  QL D+TNGFSELFA+KD
Sbjct: 150 GHIAKEAPEGKLLEAWADKLSSSSVQLTDITNGFSELFAMKD 191


>ref|NP_001052463.1| Os04g0321600 [Oryza sativa Japonica Group]
           gi|75295962|sp|Q7X923.2|SPT16_ORYSJ RecName: Full=FACT
           complex subunit SPT16; AltName: Full=Facilitates
           chromatin transcription complex subunit SPT16
           gi|38346977|emb|CAD40293.2| OSJNBb0062H02.2 [Oryza
           sativa Japonica Group] gi|113564034|dbj|BAF14377.1|
           Os04g0321600 [Oryza sativa Japonica Group]
           gi|215768327|dbj|BAH00556.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 1056

 Score =  150 bits (380), Expect = 8e-35
 Identities = 71/102 (69%), Positives = 87/102 (85%)
 Frame = -1

Query: 308 HFLCSQKKANLLETLRKPAKEAVGADVVIHVRAKNDDGTGLMEEMLRAARTQSKSDSVLV 129
           HFLCSQKKANL+ TL+K A +AVGAD+V+HV+AKND G GLME+++RA   QSKSD  +V
Sbjct: 90  HFLCSQKKANLIGTLKKAANDAVGADIVLHVKAKNDSGVGLMEDIVRAVCAQSKSDDPIV 149

Query: 128 GYIAKEAPEGKLLETWSEKLNGSGFQLGDVTNGFSELFAVKD 3
           G+IAKEAPEGKLLE W++KL+ S  QL D+TNGFSELFA+KD
Sbjct: 150 GHIAKEAPEGKLLEAWADKLSSSSVQLTDITNGFSELFAMKD 191


>ref|XP_002466155.1| hypothetical protein SORBIDRAFT_01g002390 [Sorghum bicolor]
           gi|241920009|gb|EER93153.1| hypothetical protein
           SORBIDRAFT_01g002390 [Sorghum bicolor]
          Length = 1054

 Score =  149 bits (375), Expect = 3e-34
 Identities = 71/102 (69%), Positives = 86/102 (84%)
 Frame = -1

Query: 308 HFLCSQKKANLLETLRKPAKEAVGADVVIHVRAKNDDGTGLMEEMLRAARTQSKSDSVLV 129
           H LCSQKKANL+ TL+K A E+VG D+V+HV+ KN DG  LM+ +++AAR QSKSD  +V
Sbjct: 87  HVLCSQKKANLIGTLKKAANESVGVDIVLHVKTKNGDGADLMDHIVQAARNQSKSDKPVV 146

Query: 128 GYIAKEAPEGKLLETWSEKLNGSGFQLGDVTNGFSELFAVKD 3
           G+IAKE PEGKLLETW+EKL+GSG +L DVTNGFSELFAVKD
Sbjct: 147 GHIAKEVPEGKLLETWTEKLSGSGVRLTDVTNGFSELFAVKD 188


>gb|ACD46678.1| hypothetical protein [Aegilops tauschii]
          Length = 1085

 Score =  147 bits (371), Expect = 9e-34
 Identities = 70/102 (68%), Positives = 86/102 (84%)
 Frame = -1

Query: 308 HFLCSQKKANLLETLRKPAKEAVGADVVIHVRAKNDDGTGLMEEMLRAARTQSKSDSVLV 129
           HFLCSQKKANL+ TL+  A EAVG+D+++HV++KN DG  LM+++LRA   QSKSD+ +V
Sbjct: 88  HFLCSQKKANLIGTLKDAASEAVGSDIILHVKSKNGDGIDLMDDILRAVSAQSKSDTPVV 147

Query: 128 GYIAKEAPEGKLLETWSEKLNGSGFQLGDVTNGFSELFAVKD 3
           G+IAKEAPEGKLLETW+EKL G   QL DVT+GFSELFAVKD
Sbjct: 148 GHIAKEAPEGKLLETWAEKLAGGSVQLADVTHGFSELFAVKD 189


>ref|XP_002330007.1| global transcription factor group [Populus trichocarpa]
           gi|222871432|gb|EEF08563.1| global transcription factor
           group [Populus trichocarpa]
          Length = 1065

 Score =  146 bits (369), Expect = 1e-33
 Identities = 71/105 (67%), Positives = 88/105 (83%), Gaps = 3/105 (2%)
 Frame = -1

Query: 308 HFLCSQKKANLLETLRKPAKEAVGADVVIHVRAKNDDGTGLMEEMLRAARTQSKSD---S 138
           HFLCSQKKA+LLE ++KPA+E VG DVV+HV+AK D+GTGLME + RA R+QS +D   +
Sbjct: 92  HFLCSQKKASLLEVVKKPAREVVGVDVVMHVKAKTDNGTGLMEAIFRAIRSQSGADGQVA 151

Query: 137 VLVGYIAKEAPEGKLLETWSEKLNGSGFQLGDVTNGFSELFAVKD 3
            +VG+I +EAPEG LLETWSEKL G+GF+L DVTNG S+LFAVKD
Sbjct: 152 PVVGHIVREAPEGNLLETWSEKLKGAGFELADVTNGLSDLFAVKD 196


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