BLASTX nr result

ID: Dioscorea21_contig00025677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025677
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [V...   206   2e-51
ref|XP_003539853.1| PREDICTED: large subunit GTPase 1 homolog [G...   202   3e-50
ref|XP_003538087.1| PREDICTED: large subunit GTPase 1 homolog [G...   201   4e-50
ref|XP_002443580.1| hypothetical protein SORBIDRAFT_08g021890 [S...   191   4e-47
gb|ACG45515.1| GTP binding protein [Zea mays]                         191   4e-47

>ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [Vitis vinifera]
          Length = 597

 Score =  206 bits (523), Expect = 2e-51
 Identities = 101/118 (85%), Positives = 107/118 (90%), Gaps = 1/118 (0%)
 Frame = -1

Query: 432 KNLDIWRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYAREIDEHKKTLLLVNKADLLP 253
           KNLDIWRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYA+EIDEHKKTLLLVNKADLLP
Sbjct: 152 KNLDIWRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYAQEIDEHKKTLLLVNKADLLP 211

Query: 252 LSVRQRWARYFRLHGILFVFWSAKAASASLEGKKLNHHWEDEKFSQEA-TPDTKIYDR 82
            SVR+RWA+YFRLHGILF+FWSAKAASA+LEGKKLN  WE +K  QE    DTKIY R
Sbjct: 212 FSVRERWAKYFRLHGILFIFWSAKAASAALEGKKLNVQWETQKPLQETDDADTKIYGR 269


>ref|XP_003539853.1| PREDICTED: large subunit GTPase 1 homolog [Glycine max]
          Length = 598

 Score =  202 bits (513), Expect = 3e-50
 Identities = 96/143 (67%), Positives = 110/143 (76%)
 Frame = -1

Query: 432 KNLDIWRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYAREIDEHKKTLLLVNKADLLP 253
           KNLDIWRQLWRV+ERSDLLVMVVD+RDPLFYRCPDLEAYARE+DEHK+TLLLVNKADLLP
Sbjct: 152 KNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAREVDEHKRTLLLVNKADLLP 211

Query: 252 LSVRQRWARYFRLHGILFVFWSAKAASASLEGKKLNHHWEDEKFSQEATPDTKIYDRTXX 73
            S+R++WA YFR H ILF+FWSAKAA+A+LEGKKL   WED+   +  +PDTKIY R   
Sbjct: 212 ASIREKWAEYFRAHDILFIFWSAKAATAALEGKKLGSSWEDDNMGRTNSPDTKIYGRDEL 271

Query: 72  XXXXXXXXXAIVANRMASNDQES 4
                     IV  R  S   E+
Sbjct: 272 LARLQSEAEEIVDRRRNSGSSEA 294


>ref|XP_003538087.1| PREDICTED: large subunit GTPase 1 homolog [Glycine max]
          Length = 594

 Score =  201 bits (512), Expect = 4e-50
 Identities = 95/143 (66%), Positives = 111/143 (77%)
 Frame = -1

Query: 432 KNLDIWRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYAREIDEHKKTLLLVNKADLLP 253
           KNLDIWRQLWRV+ERSDLLVMVVD+RDPLFYRCPDLEAYARE+DEHK+TLLLVNKADLLP
Sbjct: 151 KNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAREVDEHKRTLLLVNKADLLP 210

Query: 252 LSVRQRWARYFRLHGILFVFWSAKAASASLEGKKLNHHWEDEKFSQEATPDTKIYDRTXX 73
           +S+R++WA YFR H ILF+FWSAKAA+A+LEGKKL   WED+   +  +PDTKIY R   
Sbjct: 211 VSIREKWAEYFRAHDILFIFWSAKAATAALEGKKLGSSWEDDNMGRTNSPDTKIYGRDEL 270

Query: 72  XXXXXXXXXAIVANRMASNDQES 4
                     IV  R  S   ++
Sbjct: 271 LARLQSEAEEIVDRRRNSGSSDA 293


>ref|XP_002443580.1| hypothetical protein SORBIDRAFT_08g021890 [Sorghum bicolor]
           gi|241944273|gb|EES17418.1| hypothetical protein
           SORBIDRAFT_08g021890 [Sorghum bicolor]
          Length = 597

 Score =  191 bits (486), Expect = 4e-47
 Identities = 98/146 (67%), Positives = 116/146 (79%), Gaps = 3/146 (2%)
 Frame = -1

Query: 432 KNLDIWRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYAREIDEHKKTLLLVNKADLLP 253
           KN+DIWRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYA+EIDEHK+T+LLVNKADLLP
Sbjct: 156 KNIDIWRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYAKEIDEHKRTMLLVNKADLLP 215

Query: 252 LSVRQRWARYFRLHGILFVFWSAKAASASLEGKKLNHHWEDEKFSQEATPDTKIYDRTXX 73
           L++R+RWA YF+ H IL+VFWSAKAA+A+LEGKKL+ + E+E  S +   DTKIY R   
Sbjct: 216 LNIRKRWADYFKAHDILYVFWSAKAATATLEGKKLSGYSEEESASLDL--DTKIYGRDEL 273

Query: 72  XXXXXXXXXAIVANRMAS---NDQES 4
                    +IVA R  S   +DQE+
Sbjct: 274 LMKLQAEAESIVAQRRTSTSVDDQEA 299


>gb|ACG45515.1| GTP binding protein [Zea mays]
          Length = 596

 Score =  191 bits (486), Expect = 4e-47
 Identities = 96/138 (69%), Positives = 111/138 (80%)
 Frame = -1

Query: 432 KNLDIWRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYAREIDEHKKTLLLVNKADLLP 253
           KN+DIWRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYA+EIDEHK+T+LLVNKADLLP
Sbjct: 156 KNIDIWRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYAKEIDEHKRTILLVNKADLLP 215

Query: 252 LSVRQRWARYFRLHGILFVFWSAKAASASLEGKKLNHHWEDEKFSQEATPDTKIYDRTXX 73
           LS+R+RWA YF+ H IL+VFWSAKAA+A+LEGKKL+ + E E  S +   DTKIY+R   
Sbjct: 216 LSIRKRWADYFKAHAILYVFWSAKAATATLEGKKLSGYSEGESASLDL--DTKIYERDEL 273

Query: 72  XXXXXXXXXAIVANRMAS 19
                    +IVA R  S
Sbjct: 274 LMKLQAEAESIVAQRRVS 291


Top