BLASTX nr result
ID: Dioscorea21_contig00025669
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00025669
(547 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002322960.1| predicted protein [Populus trichocarpa] gi|2... 81 3e-23
ref|XP_002533891.1| pentatricopeptide repeat-containing protein,... 79 7e-23
gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indi... 66 6e-21
ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group] g... 66 6e-21
gb|AFW84538.1| hypothetical protein ZEAMMB73_463361, partial [Ze... 65 1e-18
>ref|XP_002322960.1| predicted protein [Populus trichocarpa] gi|222867590|gb|EEF04721.1|
predicted protein [Populus trichocarpa]
Length = 694
Score = 80.9 bits (198), Expect(2) = 3e-23
Identities = 38/69 (55%), Positives = 51/69 (73%)
Frame = +2
Query: 224 CEGGYVDGASRVCAEIIKSGFFLDVVTCNSLLNGFCKSKRMAESLKLRELMGKESVHNIV 403
C+ G VDGA V E++K +DVVT N+LLNGFC++ ++ ES +L +MGKE+ HN+V
Sbjct: 301 CDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVV 360
Query: 404 SYNILIRGL 430
SYNI IRGL
Sbjct: 361 SYNIFIRGL 369
Score = 52.8 bits (125), Expect(2) = 3e-23
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = +3
Query: 90 IEYNAMLKGLCKIARFDKVLEMWNRMAMNGLRPCLFTYGILIHG 221
+ YN M+ GLCK+ RFD+ LEMW RM N LFTY LI G
Sbjct: 256 VTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICG 299
Score = 42.4 bits (98), Expect(2) = 2e-06
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +2
Query: 233 GYVDGASRVCAEIIKSGFFLDVVTCNSLLNGFCKSKRMAESL-KLRELMGKESVHNIVSY 409
G VD A + ++ K G L CN L+NGF ++ ++ E++ RE+ K +VSY
Sbjct: 443 GRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSY 502
Query: 410 NILIRGL 430
N LI GL
Sbjct: 503 NTLINGL 509
Score = 34.3 bits (77), Expect(2) = 2e-06
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 90 IEYNAMLKGLCKIARFDKVLEMWNRMAMNGLRPCLFTYGILIHG 221
+ YN ++GL + + ++ + +W + G TYG+LIHG
Sbjct: 360 VSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHG 403
>ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526155|gb|EEF28491.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 701
Score = 78.6 bits (192), Expect(2) = 7e-23
Identities = 36/69 (52%), Positives = 51/69 (73%)
Frame = +2
Query: 224 CEGGYVDGASRVCAEIIKSGFFLDVVTCNSLLNGFCKSKRMAESLKLRELMGKESVHNIV 403
CE G +DGA RV EI++S +D VT N++LNGFC++ ++ ES +L +MGKE+ +V
Sbjct: 303 CEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVV 362
Query: 404 SYNILIRGL 430
SYNILI+GL
Sbjct: 363 SYNILIKGL 371
Score = 53.9 bits (128), Expect(2) = 7e-23
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +3
Query: 90 IEYNAMLKGLCKIARFDKVLEMWNRMAMNGLRPCLFTYGILIHG 221
+ YN M+ GLCK RFD+ LE+W RM N +FTY LIHG
Sbjct: 258 VTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHG 301
Score = 50.1 bits (118), Expect(2) = 4e-11
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +2
Query: 224 CEGGYVDGASRVCAEIIKSGFFLDVVTCNSLLNGFCKSKRMAESLK-LRELMGKESVHNI 400
C+ G +D A + ++ K G+ LD CN L+NGF ++ ++ +++ RE+ K I
Sbjct: 442 CKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTI 501
Query: 401 VSYNILIRGL 430
VSYN LI+GL
Sbjct: 502 VSYNTLIKGL 511
Score = 42.7 bits (99), Expect(2) = 4e-11
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 90 IEYNAMLKGLCKIARFDKVLEMWNRMAMNGLRPCLFTYGILIHG 221
+ YN ++KGL + + ++ + +W + G RP TYG+LIHG
Sbjct: 362 VSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHG 405
Score = 38.5 bits (88), Expect(2) = 2e-06
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 233 GYVDGASRVCAEIIKS-GFFLDVVTCNSLLNGFCKSKRMAESLKLRELMGK-ESVHNIVS 406
G D + ++K + +VVT N ++NG CK R ESL++ E M K E ++ +
Sbjct: 235 GDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFT 294
Query: 407 YNILIRGL 430
Y+ LI GL
Sbjct: 295 YSSLIHGL 302
Score = 38.1 bits (87), Expect(2) = 2e-06
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 96 YNAMLKGLCKIARFDKVLEMWNRMAMNGLRPCLFTYGILIHGPVRV 233
YN ++K CK + +K + + + M L+P +F+YG LI+G V+V
Sbjct: 154 YNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKV 199
>gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 66.2 bits (160), Expect(2) = 6e-21
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +2
Query: 224 CEGGYVDGASRVCAEIIKSGFFLDVVTCNSLLNGFCKSKRMAESLKLRELMGKESVHNIV 403
C G VDGA+RV +EIIK+G +D NSL+ GFC++ R+ E+ K + G + N+
Sbjct: 310 CRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLR 369
Query: 404 SYNILIRGL 430
+YNI+I+GL
Sbjct: 370 TYNIMIKGL 378
Score = 59.7 bits (143), Expect(2) = 6e-21
Identities = 27/45 (60%), Positives = 31/45 (68%)
Frame = +3
Query: 96 YNAMLKGLCKIARFDKVLEMWNRMAMNGLRPCLFTYGILIHGPVR 230
YN ML GLCK RF +V E+W RM N L+P + TYGILIHG R
Sbjct: 267 YNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCR 311
Score = 44.7 bits (104), Expect(2) = 5e-07
Identities = 19/70 (27%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +2
Query: 227 EGGYVDGASRVCAEIIKSGFFLDVVTCNSLLNGFCKSKRMAESLK-LRELMGKESVHNIV 403
E GY+D A+ + I + G D+++ N+ + G C R+ E ++ L E++ + + ++
Sbjct: 627 ETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVI 686
Query: 404 SYNILIRGLL 433
++NIL+R ++
Sbjct: 687 TWNILVRAVI 696
Score = 33.9 bits (76), Expect(2) = 5e-07
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 96 YNAMLKGLCKIARFDKVLEMWNRMAMNGLRPCLFTYGILIHG 221
Y ++++GL + D L +W ++ GL+ + + ILIHG
Sbjct: 547 YGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHG 588
Score = 43.1 bits (100), Expect(2) = 9e-07
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +2
Query: 224 CEGGYVDGASRVCAEIIKSGFFLDVVTCNSLLNGFCKSKRMAESLKLRELMGKESVH-NI 400
C+ G+ + A + E SG LDV + +S++NG C R+ +++K+ E M K+ N
Sbjct: 415 CQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNS 474
Query: 401 VSYNILIRG 427
YN LI G
Sbjct: 475 HIYNALISG 483
Score = 34.7 bits (78), Expect(2) = 9e-07
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 96 YNAMLKGLCKIARFDKVLEMWNRMAMNGLRPCLFTYGILIHG 221
YN+++KG C+ R + + W+ GLR L TY I+I G
Sbjct: 337 YNSLVKGFCQAGRVQEAWKFWDSAGFAGLRN-LRTYNIMIKG 377
>ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer
[Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa
Japonica Group] gi|125572662|gb|EAZ14177.1| hypothetical
protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 66.2 bits (160), Expect(2) = 6e-21
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +2
Query: 224 CEGGYVDGASRVCAEIIKSGFFLDVVTCNSLLNGFCKSKRMAESLKLRELMGKESVHNIV 403
C G VDGA+RV +EIIK+G +D NSL+ GFC++ R+ E+ K + G + N+
Sbjct: 310 CRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLR 369
Query: 404 SYNILIRGL 430
+YNI+I+GL
Sbjct: 370 TYNIMIKGL 378
Score = 59.7 bits (143), Expect(2) = 6e-21
Identities = 27/45 (60%), Positives = 31/45 (68%)
Frame = +3
Query: 96 YNAMLKGLCKIARFDKVLEMWNRMAMNGLRPCLFTYGILIHGPVR 230
YN ML GLCK RF +V E+W RM N L+P + TYGILIHG R
Sbjct: 267 YNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCR 311
Score = 44.7 bits (104), Expect(2) = 5e-07
Identities = 19/70 (27%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +2
Query: 227 EGGYVDGASRVCAEIIKSGFFLDVVTCNSLLNGFCKSKRMAESLK-LRELMGKESVHNIV 403
E GY+D A+ + I + G D+++ N+ + G C R+ E ++ L E++ + + ++
Sbjct: 627 ETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVI 686
Query: 404 SYNILIRGLL 433
++NIL+R ++
Sbjct: 687 TWNILVRAVI 696
Score = 33.9 bits (76), Expect(2) = 5e-07
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 96 YNAMLKGLCKIARFDKVLEMWNRMAMNGLRPCLFTYGILIHG 221
Y ++++GL + D L +W ++ GL+ + + ILIHG
Sbjct: 547 YGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHG 588
Score = 43.1 bits (100), Expect(2) = 9e-07
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +2
Query: 224 CEGGYVDGASRVCAEIIKSGFFLDVVTCNSLLNGFCKSKRMAESLKLRELMGKESVH-NI 400
C+ G+ + A + E SG LDV + +S++NG C R+ +++K+ E M K+ N
Sbjct: 415 CQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNS 474
Query: 401 VSYNILIRG 427
YN LI G
Sbjct: 475 HIYNALISG 483
Score = 34.7 bits (78), Expect(2) = 9e-07
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 96 YNAMLKGLCKIARFDKVLEMWNRMAMNGLRPCLFTYGILIHG 221
YN+++KG C+ R + + W+ GLR L TY I+I G
Sbjct: 337 YNSLVKGFCQAGRVQEAWKFWDSAGFAGLRN-LRTYNIMIKG 377
>gb|AFW84538.1| hypothetical protein ZEAMMB73_463361, partial [Zea mays]
Length = 423
Score = 65.1 bits (157), Expect(2) = 1e-18
Identities = 29/70 (41%), Positives = 44/70 (62%)
Frame = +2
Query: 224 CEGGYVDGASRVCAEIIKSGFFLDVVTCNSLLNGFCKSKRMAESLKLRELMGKESVHNIV 403
C G VD A+RV ++++K+G LDV NSL+ GFCK R E+ K + G + I
Sbjct: 351 CRSGDVDSAARVYSDMVKAGLVLDVAVYNSLIKGFCKVGRTGEAWKFWDSTGFSGIRQIT 410
Query: 404 SYNILIRGLL 433
+YN++++GLL
Sbjct: 411 TYNVMMKGLL 420
Score = 53.1 bits (126), Expect(2) = 1e-18
Identities = 24/45 (53%), Positives = 29/45 (64%)
Frame = +3
Query: 96 YNAMLKGLCKIARFDKVLEMWNRMAMNGLRPCLFTYGILIHGPVR 230
Y ML GLCK+ RF + E+W+RM N +P TYGILIHG R
Sbjct: 308 YKVMLDGLCKLGRFKEAGEVWSRMVANNHQPDTVTYGILIHGLCR 352