BLASTX nr result

ID: Dioscorea21_contig00025656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025656
         (936 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001059094.1| Os07g0191500 [Oryza sativa Japonica Group] g...   421   e-115
gb|EAZ38987.1| hypothetical protein OsJ_23405 [Oryza sativa Japo...   421   e-115
ref|XP_002459490.1| hypothetical protein SORBIDRAFT_02g005450 [S...   419   e-115
tpg|DAA42485.1| TPA: pentatricopeptide repeat protein PPR986-12 ...   419   e-115
gb|ACG26694.1| pentatricopeptide repeat protein PPR986-12 [Zea m...   417   e-114

>ref|NP_001059094.1| Os07g0191500 [Oryza sativa Japonica Group]
            gi|34394559|dbj|BAC83863.1| putative pentatricopeptide
            (PPR) repeat-containing protein [Oryza sativa Japonica
            Group] gi|50510108|dbj|BAD30876.1| putative
            pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group] gi|113610630|dbj|BAF21008.1|
            Os07g0191500 [Oryza sativa Japonica Group]
          Length = 550

 Score =  421 bits (1083), Expect = e-115
 Identities = 201/297 (67%), Positives = 248/297 (83%)
 Frame = +2

Query: 8    DSLLAFVRMIADVEGDKLRPNSITFIGVLSACNHGGLVTEGRKYFRSMVDEFGIKPQLEH 187
            +S+  F RM    + +K+ PN+ITF+ VLSACNHGGLV EGR+YF  MVD++ IKP++EH
Sbjct: 258  ESVELFDRM---TQVEKMAPNAITFVAVLSACNHGGLVEEGRRYFAMMVDQYRIKPRIEH 314

Query: 188  YGCMVDILSRAGHIEEALELVKNMNCKPDVVIWRSILDACCKRNAGVEFSEAVAKRALES 367
            YGCMVD+L+RAG IEEAL++V  MNC+PD +IWRS+LDACCK+NAG+E +EA+AK ALE 
Sbjct: 315  YGCMVDLLARAGFIEEALDIVAGMNCRPDAIIWRSLLDACCKKNAGLELTEAMAKLALEV 374

Query: 368  ELVATSGVYVLLSKVYASANRWNEVGLVRRLMSEEGIKKEPGCSSIEIGDGIVHEFVAGD 547
               A SGVYVLLS+VYASA RWN+VG+VRRLM EEG+KKEPG SSIE+ DG+VH+FVAGD
Sbjct: 375  PDDAVSGVYVLLSRVYASAQRWNDVGMVRRLMVEEGVKKEPGFSSIEM-DGLVHQFVAGD 433

Query: 548  SSHPKSKEIYEKLNEVECKLVMAGYVPDSSQAPLVAEVDGVKCESLRRHSERLAIAFGLI 727
            +SHP+S+ IYEKL+E++ KL  AGY PD S+APLVA +D  K  +LR HSERLAI+FGL+
Sbjct: 434  TSHPQSEAIYEKLDEIQLKLTSAGYKPDLSEAPLVASIDNAKGAALRLHSERLAISFGLL 493

Query: 728  STKPGATIRVLKNLRICRDCHEIAKLISKLYCREIVVRDRARFHHFKDGSCSCMDYW 898
            +  PGA IR+LKNLR+C+DCH I+KLISKLY  EI+VRDR RFHHFKDGSCSC DYW
Sbjct: 494  NATPGAPIRILKNLRVCKDCHTISKLISKLYGVEIIVRDRIRFHHFKDGSCSCKDYW 550


>gb|EAZ38987.1| hypothetical protein OsJ_23405 [Oryza sativa Japonica Group]
          Length = 531

 Score =  421 bits (1083), Expect = e-115
 Identities = 201/297 (67%), Positives = 248/297 (83%)
 Frame = +2

Query: 8    DSLLAFVRMIADVEGDKLRPNSITFIGVLSACNHGGLVTEGRKYFRSMVDEFGIKPQLEH 187
            +S+  F RM    + +K+ PN+ITF+ VLSACNHGGLV EGR+YF  MVD++ IKP++EH
Sbjct: 239  ESVELFDRM---TQVEKMAPNAITFVAVLSACNHGGLVEEGRRYFAMMVDQYRIKPRIEH 295

Query: 188  YGCMVDILSRAGHIEEALELVKNMNCKPDVVIWRSILDACCKRNAGVEFSEAVAKRALES 367
            YGCMVD+L+RAG IEEAL++V  MNC+PD +IWRS+LDACCK+NAG+E +EA+AK ALE 
Sbjct: 296  YGCMVDLLARAGFIEEALDIVAGMNCRPDAIIWRSLLDACCKKNAGLELTEAMAKLALEV 355

Query: 368  ELVATSGVYVLLSKVYASANRWNEVGLVRRLMSEEGIKKEPGCSSIEIGDGIVHEFVAGD 547
               A SGVYVLLS+VYASA RWN+VG+VRRLM EEG+KKEPG SSIE+ DG+VH+FVAGD
Sbjct: 356  PDDAVSGVYVLLSRVYASAQRWNDVGMVRRLMVEEGVKKEPGFSSIEM-DGLVHQFVAGD 414

Query: 548  SSHPKSKEIYEKLNEVECKLVMAGYVPDSSQAPLVAEVDGVKCESLRRHSERLAIAFGLI 727
            +SHP+S+ IYEKL+E++ KL  AGY PD S+APLVA +D  K  +LR HSERLAI+FGL+
Sbjct: 415  TSHPQSEAIYEKLDEIQLKLTSAGYKPDLSEAPLVASIDNAKGAALRLHSERLAISFGLL 474

Query: 728  STKPGATIRVLKNLRICRDCHEIAKLISKLYCREIVVRDRARFHHFKDGSCSCMDYW 898
            +  PGA IR+LKNLR+C+DCH I+KLISKLY  EI+VRDR RFHHFKDGSCSC DYW
Sbjct: 475  NATPGAPIRILKNLRVCKDCHTISKLISKLYGVEIIVRDRIRFHHFKDGSCSCKDYW 531


>ref|XP_002459490.1| hypothetical protein SORBIDRAFT_02g005450 [Sorghum bicolor]
           gi|241922867|gb|EER96011.1| hypothetical protein
           SORBIDRAFT_02g005450 [Sorghum bicolor]
          Length = 395

 Score =  419 bits (1078), Expect = e-115
 Identities = 202/299 (67%), Positives = 249/299 (83%)
 Frame = +2

Query: 2   VEDSLLAFVRMIADVEGDKLRPNSITFIGVLSACNHGGLVTEGRKYFRSMVDEFGIKPQL 181
           V DSL  F RM      + +RPN+ITF+ VLSACN+GGLV EGR+YF +MV E+GI+P++
Sbjct: 101 VRDSLDLFDRM---TRVENVRPNAITFVAVLSACNYGGLVEEGRRYFAAMVSEYGIRPRI 157

Query: 182 EHYGCMVDILSRAGHIEEALELVKNMNCKPDVVIWRSILDACCKRNAGVEFSEAVAKRAL 361
           EHYGC+VDIL+RAG IEEAL++V  MNC+PD +IWRS+LDACCKRNAG+E SEA+AK AL
Sbjct: 158 EHYGCLVDILARAGFIEEALDVVAGMNCRPDSIIWRSLLDACCKRNAGLELSEAMAKLAL 217

Query: 362 ESELVATSGVYVLLSKVYASANRWNEVGLVRRLMSEEGIKKEPGCSSIEIGDGIVHEFVA 541
           +    A SGVYVLLS+VYASA RWN+VG++RRLMSEEG KKEPG SSIE+ DG VH+FVA
Sbjct: 218 DVPDDAVSGVYVLLSRVYASAQRWNDVGMIRRLMSEEGFKKEPGFSSIEM-DGSVHQFVA 276

Query: 542 GDSSHPKSKEIYEKLNEVECKLVMAGYVPDSSQAPLVAEVDGVKCESLRRHSERLAIAFG 721
           GD+SHP+S+EIYEKL+E++ +L  AGY PD S+AP+VA++D  K  +LR HSERLAI+FG
Sbjct: 277 GDTSHPQSEEIYEKLDEIQQRLTSAGYKPDLSEAPMVADIDRTKGATLRLHSERLAISFG 336

Query: 722 LISTKPGATIRVLKNLRICRDCHEIAKLISKLYCREIVVRDRARFHHFKDGSCSCMDYW 898
           L++  PGA IR+LKNLR+C+DCH I+KLISKLY  EI+VRDR RFHHFK GSCSC DYW
Sbjct: 337 LLNVTPGAPIRILKNLRVCKDCHTISKLISKLYDVEIIVRDRIRFHHFKGGSCSCKDYW 395


>tpg|DAA42485.1| TPA: pentatricopeptide repeat protein PPR986-12 [Zea mays]
          Length = 548

 Score =  419 bits (1076), Expect = e-115
 Identities = 205/299 (68%), Positives = 250/299 (83%)
 Frame = +2

Query: 2    VEDSLLAFVRMIADVEGDKLRPNSITFIGVLSACNHGGLVTEGRKYFRSMVDEFGIKPQL 181
            V+DSL  F RM   VEG  L PN+ITF+ VLSACNHGGLV EGR+YF +MV E GI+P++
Sbjct: 254  VQDSLDLFDRMTR-VEG--LVPNAITFVAVLSACNHGGLVDEGRRYFAAMVSEHGIRPRI 310

Query: 182  EHYGCMVDILSRAGHIEEALELVKNMNCKPDVVIWRSILDACCKRNAGVEFSEAVAKRAL 361
            EHYGCMVDIL+RAG IEEAL++V  MNC+PD +IWRS+LDACCKRNAG+E SEA+AK AL
Sbjct: 311  EHYGCMVDILARAGFIEEALDVVAGMNCRPDSIIWRSLLDACCKRNAGLELSEAMAKLAL 370

Query: 362  ESELVATSGVYVLLSKVYASANRWNEVGLVRRLMSEEGIKKEPGCSSIEIGDGIVHEFVA 541
            +    A SGVYVLLS+VYASA RWN+VG++R+LMS+EG KKEPG SSIE+ DG VH+FVA
Sbjct: 371  DVPDDAVSGVYVLLSRVYASAQRWNDVGMIRQLMSQEGFKKEPGFSSIEM-DGSVHQFVA 429

Query: 542  GDSSHPKSKEIYEKLNEVECKLVMAGYVPDSSQAPLVAEVDGVKCESLRRHSERLAIAFG 721
            GD+SHP+S+EIY KL+E++ +L  AGY PD S+AP+VA++D  K  +LR HSERLAI+FG
Sbjct: 430  GDTSHPQSEEIYVKLDEIQQRLTSAGYKPDLSEAPMVADIDRTKGATLRLHSERLAISFG 489

Query: 722  LISTKPGATIRVLKNLRICRDCHEIAKLISKLYCREIVVRDRARFHHFKDGSCSCMDYW 898
            L++  PGA IR+LKNLR+C+DCH I+KLISKLY  EI+VRDR RFHHFKDGSCSC DYW
Sbjct: 490  LLNATPGAPIRILKNLRVCKDCHTISKLISKLYNVEIIVRDRIRFHHFKDGSCSCKDYW 548


>gb|ACG26694.1| pentatricopeptide repeat protein PPR986-12 [Zea mays]
          Length = 551

 Score =  417 bits (1073), Expect = e-114
 Identities = 204/299 (68%), Positives = 250/299 (83%)
 Frame = +2

Query: 2    VEDSLLAFVRMIADVEGDKLRPNSITFIGVLSACNHGGLVTEGRKYFRSMVDEFGIKPQL 181
            V+DSL  F RM   VEG  L PN+ITF+ VLSACNHGGLV EGR+YF +MV + GI+P++
Sbjct: 257  VQDSLDLFDRMTR-VEG--LVPNAITFVAVLSACNHGGLVDEGRRYFAAMVSDHGIRPRI 313

Query: 182  EHYGCMVDILSRAGHIEEALELVKNMNCKPDVVIWRSILDACCKRNAGVEFSEAVAKRAL 361
            EHYGCMVDIL+RAG IEEAL++V  MNC+PD +IWRS+LDACCKRNAG+E SEA+AK AL
Sbjct: 314  EHYGCMVDILARAGFIEEALDVVAGMNCRPDSIIWRSLLDACCKRNAGLELSEAMAKLAL 373

Query: 362  ESELVATSGVYVLLSKVYASANRWNEVGLVRRLMSEEGIKKEPGCSSIEIGDGIVHEFVA 541
            +    A SGVYVLLS+VYASA RWN+VG++R+LMS+EG KKEPG SSIE+ DG VH+FVA
Sbjct: 374  DVPDDAVSGVYVLLSRVYASAQRWNDVGMIRQLMSQEGFKKEPGFSSIEM-DGSVHQFVA 432

Query: 542  GDSSHPKSKEIYEKLNEVECKLVMAGYVPDSSQAPLVAEVDGVKCESLRRHSERLAIAFG 721
            GD+SHP+S+EIY KL+E++ +L  AGY PD S+AP+VA++D  K  +LR HSERLAI+FG
Sbjct: 433  GDTSHPQSEEIYVKLDEIQQRLTSAGYKPDLSEAPMVADIDRTKGATLRLHSERLAISFG 492

Query: 722  LISTKPGATIRVLKNLRICRDCHEIAKLISKLYCREIVVRDRARFHHFKDGSCSCMDYW 898
            L++  PGA IR+LKNLR+C+DCH I+KLISKLY  EI+VRDR RFHHFKDGSCSC DYW
Sbjct: 493  LLNATPGAPIRILKNLRVCKDCHTISKLISKLYNVEIIVRDRIRFHHFKDGSCSCKDYW 551


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