BLASTX nr result

ID: Dioscorea21_contig00025652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025652
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281644.1| PREDICTED: uncharacterized protein LOC100252...    65   4e-09
emb|CAN65462.1| hypothetical protein VITISV_002198 [Vitis vinifera]    65   4e-09
ref|XP_002315841.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002281644.1| PREDICTED: uncharacterized protein LOC100252594 [Vitis vinifera]
          Length = 698

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 45/95 (47%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
 Frame = -3

Query: 296 AATPRHPSPRLPVPGTGVFLXXXXXXXXXXXXXXXXXXXXXSHETSCAPEMTEHENGVEK 117
           AA PRHP PRLPVPGTGVFL                     S ET+ AP  TE ENG  K
Sbjct: 584 AAPPRHPPPRLPVPGTGVFLPPPGSGNSSSPQHISTEATSTSVETA-AP--TEKENGSGK 640

Query: 116 HHVNNNS-SPRNKTDGPETRLDCNGSLDNGLSTGV 15
              N+N+ SP+ K DG   R +CNGS+D    TGV
Sbjct: 641 SSSNSNTVSPKGKLDGKVHRQECNGSMD---ETGV 672


>emb|CAN65462.1| hypothetical protein VITISV_002198 [Vitis vinifera]
          Length = 1145

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 45/95 (47%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
 Frame = -3

Query: 296 AATPRHPSPRLPVPGTGVFLXXXXXXXXXXXXXXXXXXXXXSHETSCAPEMTEHENGVEK 117
           AA PRHP PRLPVPGTGVFL                     S ET+ AP  TE ENG  K
Sbjct: 597 AAPPRHPPPRLPVPGTGVFLPPPGSGNSSSPQHISTEATSTSVETA-AP--TEKENGSGK 653

Query: 116 HHVNNNS-SPRNKTDGPETRLDCNGSLDNGLSTGV 15
              N+N+ SP+ K DG   R +CNGS+D    TGV
Sbjct: 654 SSSNSNTVSPKGKLDGKVHRQECNGSMD---ETGV 685


>ref|XP_002315841.1| predicted protein [Populus trichocarpa] gi|222864881|gb|EEF02012.1|
           predicted protein [Populus trichocarpa]
          Length = 699

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/88 (39%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
 Frame = -3

Query: 293 ATPRHPSPRLPVP--GTGVFLXXXXXXXXXXXXXXXXXXXXXSHETSCAPEMTEHENGVE 120
           A+PRHPS RLPVP  GTGVFL                     +  T  A  + E ENG+ 
Sbjct: 589 ASPRHPSARLPVPIPGTGVFLPPPGSGNASSPLQLSTAATEMNFHTETA-SLPEKENGLG 647

Query: 119 KHHVNNNSSPRNKTDGPETRLDCNGSLD 36
           K + + ++SP+ K      RLDCNG LD
Sbjct: 648 KSNCDTSASPKEKLAEKTQRLDCNGILD 675


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