BLASTX nr result

ID: Dioscorea21_contig00025647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025647
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333753.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_002526132.1| serine-threonine protein kinase, plant-type,...    81   8e-14
emb|CAN79130.1| hypothetical protein VITISV_029207 [Vitis vinifera]    81   8e-14
emb|CBI24611.3| unnamed protein product [Vitis vinifera]               81   1e-13
ref|XP_002450813.1| hypothetical protein SORBIDRAFT_05g018970 [S...    81   1e-13

>ref|XP_002333753.1| predicted protein [Populus trichocarpa] gi|222838401|gb|EEE76766.1|
           predicted protein [Populus trichocarpa]
          Length = 963

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 13/143 (9%)
 Frame = +3

Query: 6   LDLSKNNINGTLAKDIGNLCKLQILDFTSNFISGGIDDL-----------VDGLSKCREN 152
           L LS+N + G + + +G +C L  LD   N ++G + DL           ++ L  C+  
Sbjct: 291 LVLSRNQLEGGIPRSLGEMCSLHTLDLCHNNLTGELSDLTRNLYGRTESSLEILRLCQNQ 350

Query: 153 KNGSASESS--DGLETLRLGNNKLNGTVPETIGRXXXXXXXXXXXXXXTGVLTESHFANL 326
             GS ++ +    L  L + NN+LNG++PE+IG                G+++  HF+NL
Sbjct: 351 LRGSLTDIARFSSLRELDISNNQLNGSIPESIGFLSKLDYFDVSFNSLQGLVSGGHFSNL 410

Query: 327 VNLTYLDLSYNSLQLNVSENWKP 395
             L +LDLSYNSL L    +W P
Sbjct: 411 SKLKHLDLSYNSLVLRFKSDWDP 433


>ref|XP_002526132.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223534509|gb|EEF36208.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 831

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 52/143 (36%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
 Frame = +3

Query: 6   LDLSKNNINGTLAKDIGNLCKLQILDFTSNFISGGIDDLVDGLSKC----------RENK 155
           L LS  ++ G L +  GN+ +L  LD + N ++  +  L+  LS C           ENK
Sbjct: 269 LHLSNTSLVGGLPRSFGNMSQLNYLDLSRNNLNVQLSKLIQNLSGCTEKSLEHLALHENK 328

Query: 156 NGSASESSDGLETLR---LGNNKLNGTVPETIGRXXXXXXXXXXXXXXTGVLTESHFANL 326
              +     G  +LR   LGNN+LNGT+ + IG+               GV+TE HF NL
Sbjct: 329 ITGSLPDLSGFSSLRHLYLGNNRLNGTIDKRIGQLYELERLNLGWNSLNGVITEDHFLNL 388

Query: 327 VNLTYLDLSYNSLQLNVSENWKP 395
            NL  L LS NSL  NV+ NW P
Sbjct: 389 TNLRDLILSGNSLIWNVTFNWVP 411


>emb|CAN79130.1| hypothetical protein VITISV_029207 [Vitis vinifera]
          Length = 1107

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 53/143 (37%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
 Frame = +3

Query: 6   LDLSKNNINGTLAKDIGNLCKLQILDFTSNFISGGIDDLVDGLSKCRENKNGSASESSDG 185
           L LS N + G + K   NLC LQ ++  SN ++G    L   L  C      + S S + 
Sbjct: 459 LSLSXNQLQGEIPKSFSNLCNLQEVELDSNNLTG---QLPQDLLACANGTLRTLSLSDNR 515

Query: 186 -------------LETLRLGNNKLNGTVPETIGRXXXXXXXXXXXXXXTGVLTESHFANL 326
                        LE L L  N+LNGT+PE+IG+               GV++E+HF NL
Sbjct: 516 FRGLVPHLIGFSFLERLYLDYNQLNGTLPESIGQLAKLTWFDIGSNSLQGVISEAHFFNL 575

Query: 327 VNLTYLDLSYNSLQLNVSENWKP 395
            NL  LDLSYNSL  N+S  W P
Sbjct: 576 SNLYRLDLSYNSLTFNMSLEWVP 598


>emb|CBI24611.3| unnamed protein product [Vitis vinifera]
          Length = 651

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 53/143 (37%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
 Frame = +3

Query: 6   LDLSKNNINGTLAKDIGNLCKLQILDFTSNFISGGIDDLVDGLSKCRENKNGSASESSDG 185
           L LS N + G + K   NLC LQ ++  SN ++G    L   L  C      + S S + 
Sbjct: 7   LSLSLNQLQGEIPKSFSNLCNLQEVELDSNNLTG---QLPQDLLACANGTLRTLSLSDNR 63

Query: 186 -------------LETLRLGNNKLNGTVPETIGRXXXXXXXXXXXXXXTGVLTESHFANL 326
                        LE L L  N+LNGT+PE+IG+               GV++E+HF NL
Sbjct: 64  FRGLVPHLIGFSFLERLYLDYNQLNGTLPESIGQLAKLTWFDIGSNSLQGVISEAHFFNL 123

Query: 327 VNLTYLDLSYNSLQLNVSENWKP 395
            NL  LDLSYNSL  N+S  W P
Sbjct: 124 SNLYRLDLSYNSLTFNMSLEWVP 146


>ref|XP_002450813.1| hypothetical protein SORBIDRAFT_05g018970 [Sorghum bicolor]
           gi|241936656|gb|EES09801.1| hypothetical protein
           SORBIDRAFT_05g018970 [Sorghum bicolor]
          Length = 621

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 53/139 (38%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
 Frame = +3

Query: 6   LDLSKNNINGTLAKDIGNLCKLQILDFTSNFISGGIDD---LVDGLSKCRENKNG----- 161
           LDL  NNI GTL   +G L  L  LD + N ISG + D   ++ GL       N      
Sbjct: 371 LDLYGNNIGGTLPNWMGQLTSLGYLDLSQNNISGMLPDSLRMLTGLEYLALTYNNITGPL 430

Query: 162 -SASESSDGLETLRLGNNKLNGTVPETIGRXXXXXXXXXXXXXXTGVLTESHFANLVNLT 338
            S      GL  L L  N+L G VP  IG                G +TE HFA+L +L 
Sbjct: 431 PSFVGEFTGLSYLDLSYNRLTGQVPREIGMLRNLENLDLTSNNLDGTITEEHFASLKSLR 490

Query: 339 YLDLSYNSLQLNVSENWKP 395
           +LDLSYNSL++ +S  W+P
Sbjct: 491 WLDLSYNSLKIEISSEWQP 509


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