BLASTX nr result

ID: Dioscorea21_contig00025634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025634
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   141   6e-32
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]   129   2e-28
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   127   7e-28
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   126   2e-27
gb|ABW74566.1| integrase [Boechera divaricarpa]                       119   3e-25

>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/119 (57%), Positives = 87/119 (73%)
 Frame = +3

Query: 12  SIWLIDSGCSNHMTGDKRLFSCLDESQKESVRLGDDKEMNVHGVGTVGIYTQGGDVKQLQ 191
           ++W IDSGCSNHM+  K LF  LDESQK  VRLGDDK++++ G GTV I T  G+VK L 
Sbjct: 309 AVWFIDSGCSNHMSSSKSLFRDLDESQKSEVRLGDDKQVHIEGKGTVEIKTVQGNVKFLY 368

Query: 192 NVQFIPGLAHNLLSVGQLLTRGYSVVFSQDSCVISDNQRKSQVITVQRTRNNMFPVDIA 368
           +VQ++P LAHNLLSVGQL+T GYSVVF  ++C I D +    +  V  T+N MFP+DI+
Sbjct: 369 DVQYVPTLAHNLLSVGQLMTSGYSVVFYDNACDIKDKESGRTIARVPMTQNKMFPLDIS 427


>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score =  129 bits (324), Expect = 2e-28
 Identities = 61/119 (51%), Positives = 81/119 (68%)
 Frame = +3

Query: 12  SIWLIDSGCSNHMTGDKRLFSCLDESQKESVRLGDDKEMNVHGVGTVGIYTQGGDVKQLQ 191
           +IW +DSGCSNHMTG K LF  LDES K  V+LGDDK++ V G GTV +    G+VK L 
Sbjct: 290 NIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQVXVEGKGTVAVNNGHGNVKLLY 349

Query: 192 NVQFIPGLAHNLLSVGQLLTRGYSVVFSQDSCVISDNQRKSQVITVQRTRNNMFPVDIA 368
           NV FIP L  NLLSVGQL+  GYS++F   +CVI D +    ++ V+   N +FP++++
Sbjct: 350 NVYFIPSLTQNLLSVGQLMVSGYSILFDGSTCVIKDKKFDQIIVDVRMAANKLFPLEVS 408


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/119 (50%), Positives = 80/119 (67%)
 Frame = +3

Query: 12  SIWLIDSGCSNHMTGDKRLFSCLDESQKESVRLGDDKEMNVHGVGTVGIYTQGGDVKQLQ 191
           +IW +DSGCSNHMTG K LF  LDES K  V+LGDDK++ V G GT  +    G+VK L 
Sbjct: 289 NIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQVQVEGKGTXAVNNGHGNVKLLY 348

Query: 192 NVQFIPGLAHNLLSVGQLLTRGYSVVFSQDSCVISDNQRKSQVITVQRTRNNMFPVDIA 368
           NV FIP L  NLLSVGQL+  GYS++F   +CVI D +    ++ V+   N +FP++++
Sbjct: 349 NVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIVBVRMAANKLFPLEVS 407


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  126 bits (316), Expect = 2e-27
 Identities = 59/119 (49%), Positives = 80/119 (67%)
 Frame = +3

Query: 12  SIWLIDSGCSNHMTGDKRLFSCLDESQKESVRLGDDKEMNVHGVGTVGIYTQGGDVKQLQ 191
           +IW +DSGCSNHMTG K LF  LDES K  V+LGDDK++ V G G + +    G+VK L 
Sbjct: 304 NIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQVXVEGKGIMAVNNGHGNVKLLY 363

Query: 192 NVQFIPGLAHNLLSVGQLLTRGYSVVFSQDSCVISDNQRKSQVITVQRTRNNMFPVDIA 368
           NV FIP L  NLLSVGQL+  GYS++F   +CVI D +    ++ V+   N +FP++++
Sbjct: 364 NVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIVNVRMAANKLFPLEVS 422


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/119 (46%), Positives = 81/119 (68%)
 Frame = +3

Query: 12  SIWLIDSGCSNHMTGDKRLFSCLDESQKESVRLGDDKEMNVHGVGTVGIYTQGGDVKQLQ 191
           S+W +DSGCSNHMTG K  F  LDES K  V+LG+DKE+ V G G V ++   G++K + 
Sbjct: 145 SVWYLDSGCSNHMTGTKSSFKELDESHKLKVKLGNDKEVQVEGRGVVAVHNGHGNLKLIY 204

Query: 192 NVQFIPGLAHNLLSVGQLLTRGYSVVFSQDSCVISDNQRKSQVITVQRTRNNMFPVDIA 368
            V +IP LAHNLLSVGQ++    SV+F  + CVI + +    +  V++T NN++P++++
Sbjct: 205 GVYYIPDLAHNLLSVGQMVENNCSVLFDGNECVIKEKKSGVTLAMVKKTSNNLYPLEMS 263


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