BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025631
         (1003 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24510.3| unnamed protein product [Vitis vinifera]              372   e-100
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec...   372   e-100
ref|XP_002510905.1| cleavage and polyadenylation specificity fac...   352   6e-95
ref|XP_002864120.1| hypothetical protein ARALYDRAFT_495232 [Arab...   347   3e-93
ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation spec...   345   8e-93

>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  372 bits (954), Expect = e-100
 Identities = 182/256 (71%), Positives = 214/256 (83%)
 Frame = +1

Query: 46  MTYAGFKILHPATGIENCASGFVTHSPSESVPKIAVVQSGDDLEAEWPARRSLGAVPNLI 225
           M+YA +K++H  TGIENCASGFVTHS ++  P+IA +Q+ DDLE+EWP +R +G +PNLI
Sbjct: 1   MSYAAYKMMHWPTGIENCASGFVTHSRADFAPQIAPIQT-DDLESEWPTKRQIGPLPNLI 59

Query: 226 VTAGNILEVYVVRVQEDDARSSQPSADPRGSGGVMDGIRGARLELVCHYRLHGNVESMAI 405
           VTA NILEVY+VRVQEDD+R S+ SA+ +  GGVM GI GA LELVC YRLHGNVE+M +
Sbjct: 60  VTAANILEVYMVRVQEDDSRESRASAETK-RGGVMAGISGAALELVCQYRLHGNVETMTV 118

Query: 406 LSVGGDDQSKRRDSIVLAFRDAKISVLEYDDAAHGFRTSSMHCFEGPEWRYLKRGRESFD 585
           L  GG D S+RRDSI+LAF+DAKISVLE+DD+ HG RTSSMHCFEGPEW +LKRG ESF 
Sbjct: 119 LPSGGGDNSRRRDSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWFHLKRGHESFA 178

Query: 586 RGPLVKADPLGRCGGVLLYGLQMIILKAAQAGQGLVGEDELAGVGSNVSVRVESSYIIDL 765
           RGPLVK DP GRC GVL+YGLQMIILKA+QAG GLVG++E    GS VS RVESSY+I L
Sbjct: 179 RGPLVKVDPQGRCSGVLVYGLQMIILKASQAGYGLVGDEEALSSGSAVSARVESSYVISL 238

Query: 766 RDLDMKHVKDFTFIHG 813
           RDLDMKHVKDFTF+HG
Sbjct: 239 RDLDMKHVKDFTFVHG 254


>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Vitis vinifera]
          Length = 1442

 Score =  372 bits (954), Expect = e-100
 Identities = 182/256 (71%), Positives = 214/256 (83%)
 Frame = +1

Query: 46  MTYAGFKILHPATGIENCASGFVTHSPSESVPKIAVVQSGDDLEAEWPARRSLGAVPNLI 225
           M+YA +K++H  TGIENCASGFVTHS ++  P+IA +Q+ DDLE+EWP +R +G +PNLI
Sbjct: 1   MSYAAYKMMHWPTGIENCASGFVTHSRADFAPQIAPIQT-DDLESEWPTKRQIGPLPNLI 59

Query: 226 VTAGNILEVYVVRVQEDDARSSQPSADPRGSGGVMDGIRGARLELVCHYRLHGNVESMAI 405
           VTA NILEVY+VRVQEDD+R S+ SA+ +  GGVM GI GA LELVC YRLHGNVE+M +
Sbjct: 60  VTAANILEVYMVRVQEDDSRESRASAETK-RGGVMAGISGAALELVCQYRLHGNVETMTV 118

Query: 406 LSVGGDDQSKRRDSIVLAFRDAKISVLEYDDAAHGFRTSSMHCFEGPEWRYLKRGRESFD 585
           L  GG D S+RRDSI+LAF+DAKISVLE+DD+ HG RTSSMHCFEGPEW +LKRG ESF 
Sbjct: 119 LPSGGGDNSRRRDSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWFHLKRGHESFA 178

Query: 586 RGPLVKADPLGRCGGVLLYGLQMIILKAAQAGQGLVGEDELAGVGSNVSVRVESSYIIDL 765
           RGPLVK DP GRC GVL+YGLQMIILKA+QAG GLVG++E    GS VS RVESSY+I L
Sbjct: 179 RGPLVKVDPQGRCSGVLVYGLQMIILKASQAGYGLVGDEEALSSGSAVSARVESSYVISL 238

Query: 766 RDLDMKHVKDFTFIHG 813
           RDLDMKHVKDFTF+HG
Sbjct: 239 RDLDMKHVKDFTFVHG 254


>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
           [Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
           and polyadenylation specificity factor cpsf, putative
           [Ricinus communis]
          Length = 1461

 Score =  352 bits (904), Expect = 6e-95
 Identities = 167/256 (65%), Positives = 214/256 (83%), Gaps = 1/256 (0%)
 Frame = +1

Query: 46  MTYAGFKILHPATGIENCASGFVTHSPSESVPKIAVVQSGDDLEAEWP-ARRSLGAVPNL 222
           M+YA +K+LH  TGIE+CASG++THS ++ VP+I  +Q+ D+L++EWP ++R +G +PNL
Sbjct: 1   MSYAAYKMLHWPTGIESCASGYITHSRADFVPQIPPIQT-DNLDSEWPPSKRGIGPMPNL 59

Query: 223 IVTAGNILEVYVVRVQEDDARSSQPSADPRGSGGVMDGIRGARLELVCHYRLHGNVESMA 402
           IVTAG++LEVYVVRVQED +R S+ S + +  GG+MDG+ GA LELVCHYRLHGNVESM 
Sbjct: 60  IVTAGSVLEVYVVRVQEDGSRESRSSRETK-RGGLMDGVSGASLELVCHYRLHGNVESMV 118

Query: 403 ILSVGGDDQSKRRDSIVLAFRDAKISVLEYDDAAHGFRTSSMHCFEGPEWRYLKRGRESF 582
           +L   G D S+RRDSI+LAF+DAKISVLE+DD+ HG RTSSMHCFEGPEW +LKRGRESF
Sbjct: 119 VLPTEGGDSSRRRDSIILAFKDAKISVLEFDDSIHGLRTSSMHCFEGPEWLHLKRGRESF 178

Query: 583 DRGPLVKADPLGRCGGVLLYGLQMIILKAAQAGQGLVGEDELAGVGSNVSVRVESSYIID 762
            RGPL+K DP GRCGG+L+Y +QMIIL+AAQA  GLVG+D+    G ++S RV+SSY+I+
Sbjct: 179 ARGPLLKVDPQGRCGGILVYDMQMIILRAAQASSGLVGDDDALSSGGSISARVQSSYVIN 238

Query: 763 LRDLDMKHVKDFTFIH 810
           LRD+DMKHVKDF F+H
Sbjct: 239 LRDMDMKHVKDFIFLH 254


>ref|XP_002864120.1| hypothetical protein ARALYDRAFT_495232 [Arabidopsis lyrata subsp.
           lyrata] gi|297309955|gb|EFH40379.1| hypothetical protein
           ARALYDRAFT_495232 [Arabidopsis lyrata subsp. lyrata]
          Length = 1444

 Score =  347 bits (889), Expect = 3e-93
 Identities = 165/257 (64%), Positives = 202/257 (78%), Gaps = 1/257 (0%)
 Frame = +1

Query: 46  MTYAGFKILHPATGIENCASGFVTHSPSESVPKIAVVQSGDDLEAEWPA-RRSLGAVPNL 222
           M++A FK++H  TG+ENCASG++THS S+S  +I +V   DD+EAEWP  +R +G +PN+
Sbjct: 1   MSFAAFKMMHWPTGVENCASGYITHSLSDSTLQIPIVSGDDDMEAEWPNHKRGIGPLPNV 60

Query: 223 IVTAGNILEVYVVRVQEDDARSSQPSADPRGSGGVMDGIRGARLELVCHYRLHGNVESMA 402
           ++TAGNILEVY+VR QE+              GGVMDG+ G  LELVCHYRLHGNVES+A
Sbjct: 61  VITAGNILEVYIVRAQEEGNTQELRIPKLVKRGGVMDGVSGVSLELVCHYRLHGNVESIA 120

Query: 403 ILSVGGDDQSKRRDSIVLAFRDAKISVLEYDDAAHGFRTSSMHCFEGPEWRYLKRGRESF 582
           +L +GG + SK RDSI+L FRDAKISVLE+DD+ H  R +SMHCFEGP+W +LKRGRESF
Sbjct: 121 VLPMGGGNSSKGRDSIILTFRDAKISVLEFDDSIHSLRMTSMHCFEGPDWLHLKRGRESF 180

Query: 583 DRGPLVKADPLGRCGGVLLYGLQMIILKAAQAGQGLVGEDELAGVGSNVSVRVESSYIID 762
            RGPLVK DP GRCGGVL+YGLQMIILKA+Q G GLVG+D+    G  VS RVESSYII+
Sbjct: 181 PRGPLVKVDPQGRCGGVLVYGLQMIILKASQVGSGLVGDDDAFSSGGTVSARVESSYIIN 240

Query: 763 LRDLDMKHVKDFTFIHG 813
           LRDL+MKHVKDF F+HG
Sbjct: 241 LRDLEMKHVKDFVFLHG 257


>ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Cucumis sativus]
          Length = 1504

 Score =  345 bits (886), Expect = 8e-93
 Identities = 167/256 (65%), Positives = 206/256 (80%)
 Frame = +1

Query: 46  MTYAGFKILHPATGIENCASGFVTHSPSESVPKIAVVQSGDDLEAEWPARRSLGAVPNLI 225
           M++A ++++H  TGIENC S ++THS ++ VP  AV    DDL+++W  RR +G VPNL+
Sbjct: 1   MSFAAYRMMHWPTGIENCDSAYITHSRADFVP--AVTSHSDDLDSDWHPRRDIGPVPNLV 58

Query: 226 VTAGNILEVYVVRVQEDDARSSQPSADPRGSGGVMDGIRGARLELVCHYRLHGNVESMAI 405
           VTAGN+LEVYVVRV E+  R S+ S + R  GG+MDG+ GA LELVCHYRLHGNVESMAI
Sbjct: 59  VTAGNVLEVYVVRVLEEGGRESKSSGEVR-RGGIMDGVSGASLELVCHYRLHGNVESMAI 117

Query: 406 LSVGGDDQSKRRDSIVLAFRDAKISVLEYDDAAHGFRTSSMHCFEGPEWRYLKRGRESFD 585
           LS  G D SK+RDSI+L F++AKISVLE+DD+ H  RTSSMHCF+GP+W +LKRGRESF 
Sbjct: 118 LSSRGGDGSKKRDSIILVFQEAKISVLEFDDSTHSLRTSSMHCFDGPQWLHLKRGRESFA 177

Query: 586 RGPLVKADPLGRCGGVLLYGLQMIILKAAQAGQGLVGEDELAGVGSNVSVRVESSYIIDL 765
           RGP+VK DP GRCGGVL+YGLQMIILKA+QAG GLV +DE  G    +S RVESSY+I+L
Sbjct: 178 RGPVVKVDPQGRCGGVLVYGLQMIILKASQAGSGLVVDDEAFGNTGAISARVESSYLINL 237

Query: 766 RDLDMKHVKDFTFIHG 813
           RDLD+KHVKDF F+HG
Sbjct: 238 RDLDVKHVKDFVFVHG 253