BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025627
         (1380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515231.1| pentatricopeptide repeat-containing protein,...   609   e-172
ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat...   605   e-171
ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat...   592   e-167
ref|XP_002310039.1| predicted protein [Populus trichocarpa] gi|2...   585   e-165
ref|XP_003591356.1| Pentatricopeptide repeat-containing protein ...   585   e-165

>ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545711|gb|EEF47215.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 505

 Score =  609 bits (1571), Expect = e-172
 Identities = 288/420 (68%), Positives = 350/420 (83%)
 Frame = +3

Query: 120  DEAVDTIFHIITTSPSESSMIDSLNQSPILLTNSLIDALLLRLRFSHANPHRALHFFSFT 299
            ++ V+ ++ IIT+S S  ++  SL  + I L+N LID +L R+RFSH NP +AL FF +T
Sbjct: 36   NDDVEVVYRIITSSSSVQNLKQSLTSTGIFLSNDLIDKVLKRVRFSHGNPLQALEFFYYT 95

Query: 300  SNRRGFFHSSSSYDTMLYILGRGRLFSHAWQLLVQMRRKDSTLITPKTLQIILGRIAKVC 479
             NR+GF+H+  S DT+LYILGR R F H W +L++M+RKD  LI+P+T+QI+L R+AK+C
Sbjct: 96   DNRKGFYHTPYSLDTILYILGRSRKFDHIWDVLIKMKRKDRFLISPRTMQIVLARVAKLC 155

Query: 480  SLRQTLDSFRRFSKISSCSDTVWFNALLRTLCQEKTMADARTVYHSLKHDFKPDLQTFNI 659
            S+RQT++SFR+F K  S  DT  FNALLRTLCQEK+M DAR VYH LK +FKP+LQTFNI
Sbjct: 156  SVRQTVESFRKFKKFVSVLDTTCFNALLRTLCQEKSMTDARNVYHRLKKEFKPNLQTFNI 215

Query: 660  LLSGWKSSDEAEHFFEEMKLLNVIPDVVSYNCLIDVYCKNREIEKARKVFDEMREREINP 839
            LLSGWK S+EAE FFEEM+ L + PDVVSYN LIDVYCK+RE+EKA KV ++MRE +I+P
Sbjct: 216  LLSGWKQSEEAELFFEEMRELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEKMREEDISP 275

Query: 840  DVFSYTSLIGGLGLIGQPDKAKELLNEMKELGCYPDVAAYNAAIRNYCIAKRIGNAFGLM 1019
            DV +YTS+IGGLGL+GQPDKA+++LNEMKE GCYPDVAAYNA IRNYCIAKR+G+A  LM
Sbjct: 276  DVITYTSIIGGLGLVGQPDKARDILNEMKEYGCYPDVAAYNAVIRNYCIAKRLGDASNLM 335

Query: 1020 EEMMSKGLFPNATTYNLFFRVFYWANELKNAWSLYLRMRRENCLPNTQSCMFLIRLCRRQ 1199
            +EM SKGL PNATTYNLFFRVFYW+N+L+N+WSLY RM    CLPNTQSCMFLIRL R+ 
Sbjct: 336  DEMASKGLSPNATTYNLFFRVFYWSNDLRNSWSLYRRMMESGCLPNTQSCMFLIRLFRKH 395

Query: 1200 EKVEMAIELWNDMVEHGFGSFTLVSDVLFDLLCDFGKLEEAEKCFLQMVDKGHKPSNVSF 1379
            EKVEMA+ LWNDMVE GFGS+ LVSDVLFDLLCD GKL EAEKCFLQM++KGHKPSNVSF
Sbjct: 396  EKVEMALTLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKCFLQMIEKGHKPSNVSF 455


>ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g02420-like [Vitis vinifera]
          Length = 526

 Score =  605 bits (1560), Expect = e-171
 Identities = 287/427 (67%), Positives = 354/427 (82%)
 Frame = +3

Query: 99   NNGDGEEDEAVDTIFHIITTSPSESSMIDSLNQSPILLTNSLIDALLLRLRFSHANPHRA 278
            +NGD      V+T+F I++++ S  ++  SL  S + L+N LID +L R+RFSH NP +A
Sbjct: 56   DNGD------VETVFRIVSSASSTRNLKQSLKSSGVFLSNDLIDKVLKRVRFSHGNPFQA 109

Query: 279  LHFFSFTSNRRGFFHSSSSYDTMLYILGRGRLFSHAWQLLVQMRRKDSTLITPKTLQIIL 458
            L FF++T+ R+GF+H+  S DTMLYILGR R F   W+LLV MRRKD +LI+P+++Q++L
Sbjct: 110  LAFFNYTNKRKGFYHTPFSLDTMLYILGRSRRFDQIWELLVDMRRKDQSLISPRSVQVVL 169

Query: 459  GRIAKVCSLRQTLDSFRRFSKISSCSDTVWFNALLRTLCQEKTMADARTVYHSLKHDFKP 638
            GRIAKVCS++QT++SFR+F K+    DT  FNALLRTLCQEK+M DAR VYHSLKHDF+P
Sbjct: 170  GRIAKVCSVKQTVESFRKFKKLVPEFDTACFNALLRTLCQEKSMRDARNVYHSLKHDFRP 229

Query: 639  DLQTFNILLSGWKSSDEAEHFFEEMKLLNVIPDVVSYNCLIDVYCKNREIEKARKVFDEM 818
            DL+TFNILLSGWKS++EAE FF+EM+ + V PDVVSYNCLIDVYCK REIE+A KV D+M
Sbjct: 230  DLRTFNILLSGWKSAEEAEGFFDEMREMGVEPDVVSYNCLIDVYCKGREIERAYKVIDKM 289

Query: 819  REREINPDVFSYTSLIGGLGLIGQPDKAKELLNEMKELGCYPDVAAYNAAIRNYCIAKRI 998
            R+ +I+PDV SYTS+IGGLGL+GQPDKA+++L EMKE GCYPDVAAYNAAIRN+CIA R+
Sbjct: 290  RDEQISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVAAYNAAIRNFCIANRL 349

Query: 999  GNAFGLMEEMMSKGLFPNATTYNLFFRVFYWANELKNAWSLYLRMRRENCLPNTQSCMFL 1178
            G+A GLM+EM+ KGL PNATTYNLFFR FYW+N+L  +  LY RM++  CLPNTQSCMFL
Sbjct: 350  GDADGLMDEMVGKGLSPNATTYNLFFRCFYWSNDLGRSCGLYQRMKKTGCLPNTQSCMFL 409

Query: 1179 IRLCRRQEKVEMAIELWNDMVEHGFGSFTLVSDVLFDLLCDFGKLEEAEKCFLQMVDKGH 1358
             RL RRQEKVEMA+ELWNDMVE GFGS+ LVSDVLFD+LCD GKL E EKC LQM++KGH
Sbjct: 410  TRLFRRQEKVEMALELWNDMVEKGFGSYILVSDVLFDMLCDMGKLVEVEKCCLQMIEKGH 469

Query: 1359 KPSNVSF 1379
            KPSNVSF
Sbjct: 470  KPSNVSF 476


>ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g02420-like [Glycine max]
          Length = 500

 Score =  592 bits (1526), Expect = e-167
 Identities = 277/421 (65%), Positives = 348/421 (82%)
 Frame = +3

Query: 117  EDEAVDTIFHIITTSPSESSMIDSLNQSPILLTNSLIDALLLRLRFSHANPHRALHFFSF 296
            +++ V  +F I++++ +   +  SL  S + L+N +ID +L R+RFSH NP + L FF +
Sbjct: 30   QNDDVQKVFGILSSTSTPEQLKQSLKSSGVFLSNDVIDQVLKRVRFSHGNPSQTLEFFRY 89

Query: 297  TSNRRGFFHSSSSYDTMLYILGRGRLFSHAWQLLVQMRRKDSTLITPKTLQIILGRIAKV 476
            T  R+GF+HSS S DTMLYILGR R+F   W+LL++ RRKD T IT +T+ ++LGRIAKV
Sbjct: 90   TGRRKGFYHSSFSLDTMLYILGRSRMFGQVWELLIEARRKDQTAITARTVMVVLGRIAKV 149

Query: 477  CSLRQTLDSFRRFSKISSCSDTVWFNALLRTLCQEKTMADARTVYHSLKHDFKPDLQTFN 656
            CS+RQT++SFR+F K+    DT  FNALLRTLCQEK+MADAR VYHSLKH F+P+LQTFN
Sbjct: 150  CSVRQTVESFRKFRKLVQEFDTNCFNALLRTLCQEKSMADARNVYHSLKHRFRPNLQTFN 209

Query: 657  ILLSGWKSSDEAEHFFEEMKLLNVIPDVVSYNCLIDVYCKNREIEKARKVFDEMREREIN 836
            ILLSGWK+ ++A+ FF+EMK + V PDVV+YN L+DVYCK REIEKA K+ DEMR+++ +
Sbjct: 210  ILLSGWKTPEDADLFFKEMKEMGVTPDVVTYNSLMDVYCKGREIEKAYKMLDEMRDQDFS 269

Query: 837  PDVFSYTSLIGGLGLIGQPDKAKELLNEMKELGCYPDVAAYNAAIRNYCIAKRIGNAFGL 1016
            PDV +YT +IGGLGLIGQPDKA+ +L EMKE GCYPD AAYNAAIRN+CIAKR+G+A GL
Sbjct: 270  PDVITYTCIIGGLGLIGQPDKARNVLKEMKEYGCYPDAAAYNAAIRNFCIAKRLGDAHGL 329

Query: 1017 MEEMMSKGLFPNATTYNLFFRVFYWANELKNAWSLYLRMRRENCLPNTQSCMFLIRLCRR 1196
            +EEM++KGL PNATTYNLFFRVFYW+N+L+++W++Y RM  E CLPNTQSCMFLIRL RR
Sbjct: 330  VEEMVTKGLSPNATTYNLFFRVFYWSNDLQSSWNMYQRMMVEGCLPNTQSCMFLIRLFRR 389

Query: 1197 QEKVEMAIELWNDMVEHGFGSFTLVSDVLFDLLCDFGKLEEAEKCFLQMVDKGHKPSNVS 1376
             EKVEMA++ W DMVE GFGS+TLVSDVLFDLLCD GKLEEAEKCFL+MV+KG KPS+VS
Sbjct: 390  HEKVEMALQFWGDMVEKGFGSYTLVSDVLFDLLCDMGKLEEAEKCFLEMVEKGQKPSHVS 449

Query: 1377 F 1379
            F
Sbjct: 450  F 450


>ref|XP_002310039.1| predicted protein [Populus trichocarpa] gi|222852942|gb|EEE90489.1|
            predicted protein [Populus trichocarpa]
          Length = 507

 Score =  585 bits (1509), Expect = e-165
 Identities = 282/432 (65%), Positives = 345/432 (79%)
 Frame = +3

Query: 84   NPRQRNNGDGEEDEAVDTIFHIITTSPSESSMIDSLNQSPILLTNSLIDALLLRLRFSHA 263
            NP+  NN    +D  VD I++II+ S S  ++  SL  + + L+N LID +L R+RFSH 
Sbjct: 32   NPQNHNN----KDIQVDAIYNIISNSTSSQNLKQSLKSTGVFLSNDLIDKVLKRVRFSHG 87

Query: 264  NPHRALHFFSFTSNRRGFFHSSSSYDTMLYILGRGRLFSHAWQLLVQMRRKDSTLITPKT 443
            NP +AL FF+FT++RRGF+HSS S DTMLYILGR R F H W +L+ ++RKD  LITP+T
Sbjct: 88   NPLQALDFFNFTADRRGFYHSSYSLDTMLYILGRSRKFDHIWDVLIDIKRKDRNLITPRT 147

Query: 444  LQIILGRIAKVCSLRQTLDSFRRFSKISSCSDTVWFNALLRTLCQEKTMADARTVYHSLK 623
            LQ++LGR+AKVCS+R T++SF +F ++    DT  FNALLRTLCQEK+M+DAR VYH LK
Sbjct: 148  LQVVLGRVAKVCSVRMTVESFWKFKRLVPVFDTSCFNALLRTLCQEKSMSDARNVYHHLK 207

Query: 624  HDFKPDLQTFNILLSGWKSSDEAEHFFEEMKLLNVIPDVVSYNCLIDVYCKNREIEKARK 803
              F+P+LQTFNILLSGWKSS+EAE F+EEMK L V PD+V+YN LIDV+CK RE+EKA  
Sbjct: 208  KGFRPNLQTFNILLSGWKSSEEAELFYEEMKELGVKPDIVTYNSLIDVFCKGRELEKAYG 267

Query: 804  VFDEMREREINPDVFSYTSLIGGLGLIGQPDKAKELLNEMKELGCYPDVAAYNAAIRNYC 983
            V   MRE +I PDV +YTS+IGGLGL+GQPDKA+++L EMKE GCYPDVAAYNA IRNYC
Sbjct: 268  VVARMREEDILPDVITYTSIIGGLGLVGQPDKARDMLKEMKEHGCYPDVAAYNAVIRNYC 327

Query: 984  IAKRIGNAFGLMEEMMSKGLFPNATTYNLFFRVFYWANELKNAWSLYLRMRRENCLPNTQ 1163
            IAKR+  A+ LM EM SKG+ PNAT+YNLFFRVF W+N+L+N+W  Y RM    CLPNTQ
Sbjct: 328  IAKRLDAAYSLMAEMESKGMSPNATSYNLFFRVFSWSNDLRNSWDFYGRMMDAGCLPNTQ 387

Query: 1164 SCMFLIRLCRRQEKVEMAIELWNDMVEHGFGSFTLVSDVLFDLLCDFGKLEEAEKCFLQM 1343
            SCMFLI+L +R EKVEMA++LWNDMVE GFGS+ LVSDVL  +LCD GKL EAEKCFLQM
Sbjct: 388  SCMFLIKLFKRHEKVEMALQLWNDMVEKGFGSYILVSDVLLGMLCDMGKLVEAEKCFLQM 447

Query: 1344 VDKGHKPSNVSF 1379
            V+KGHKPSNVSF
Sbjct: 448  VEKGHKPSNVSF 459


>ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355480404|gb|AES61607.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 518

 Score =  585 bits (1509), Expect = e-165
 Identities = 272/420 (64%), Positives = 348/420 (82%)
 Frame = +3

Query: 120  DEAVDTIFHIITTSPSESSMIDSLNQSPILLTNSLIDALLLRLRFSHANPHRALHFFSFT 299
            ++ V  ++ I+TT+ S  ++  SL  + I L+N LID +L R+RF HANP++ L FF +T
Sbjct: 25   NDDVHKVYTILTTTSSPETLKQSLKSTQIFLSNELIDQVLKRVRFGHANPNQTLEFFRYT 84

Query: 300  SNRRGFFHSSSSYDTMLYILGRGRLFSHAWQLLVQMRRKDSTLITPKTLQIILGRIAKVC 479
              R+GF+H++ S DTMLYILGR R+F H W+LL++ RRKD  +ITP+T+ ++LGR+AKVC
Sbjct: 85   GRRKGFYHTAYSLDTMLYILGRSRMFDHVWELLIEARRKDQNVITPRTVMVVLGRVAKVC 144

Query: 480  SLRQTLDSFRRFSKISSCSDTVWFNALLRTLCQEKTMADARTVYHSLKHDFKPDLQTFNI 659
            S+RQT+++FR+F KI        FNALLRTLCQEK+M DAR VYHSLKH+F+P+LQTFNI
Sbjct: 145  SVRQTVETFRKFKKIVPDYGVNCFNALLRTLCQEKSMTDARNVYHSLKHNFRPNLQTFNI 204

Query: 660  LLSGWKSSDEAEHFFEEMKLLNVIPDVVSYNCLIDVYCKNREIEKARKVFDEMREREINP 839
            LLSGWK+ ++AE F  EMK + V PDVV+YN L+DVYCK REIEKA KVFDEMRE++++P
Sbjct: 205  LLSGWKNVEDAELFVNEMKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLSP 264

Query: 840  DVFSYTSLIGGLGLIGQPDKAKELLNEMKELGCYPDVAAYNAAIRNYCIAKRIGNAFGLM 1019
            DV +YTS+IGGLGL+GQPDKA+++L EMKE G YPDV AYNAAIRNYCIAKR+G AF L+
Sbjct: 265  DVITYTSVIGGLGLVGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFELV 324

Query: 1020 EEMMSKGLFPNATTYNLFFRVFYWANELKNAWSLYLRMRRENCLPNTQSCMFLIRLCRRQ 1199
            +EM++KGL PNATTYNLFFRVFYW+N+L+++W+LY RM  E CLP TQSCMFLIRL +R 
Sbjct: 325  DEMVNKGLSPNATTYNLFFRVFYWSNDLQSSWNLYKRMMGEGCLPYTQSCMFLIRLFKRH 384

Query: 1200 EKVEMAIELWNDMVEHGFGSFTLVSDVLFDLLCDFGKLEEAEKCFLQMVDKGHKPSNVSF 1379
            EK+EMA++LW +MVE GFGS+TLVSDVLFD+LCD GKL EAEKCFL+M++KG +PSNVSF
Sbjct: 385  EKMEMALQLWGEMVEKGFGSYTLVSDVLFDMLCDMGKLMEAEKCFLEMIEKGQRPSNVSF 444