BLASTX nr result

ID: Dioscorea21_contig00025611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025611
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15404.3| unnamed protein product [Vitis vinifera]              140   8e-32
ref|XP_002317927.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29
ref|NP_173291.4| BED zinc finger and hAT dimerization domain-con...   122   4e-26
gb|AAF98418.1|AC026238_10 Hypothetical protein [Arabidopsis thal...   122   4e-26
ref|XP_002457495.1| hypothetical protein SORBIDRAFT_03g008300 [S...   107   1e-21

>emb|CBI15404.3| unnamed protein product [Vitis vinifera]
          Length = 680

 Score =  140 bits (354), Expect = 8e-32
 Identities = 62/95 (65%), Positives = 78/95 (82%)
 Frame = +3

Query: 108 YSETGTKIMMDVSLLPNVDSIEFGIGSSEKGNTLTTGKPRKKSMTSLYLKFFETAPDGKS 287
           Y +   K +MD++L+PN+D  + G+GSSEKGN     KPRKK+MTS+YLKFFETAPDGKS
Sbjct: 12  YKDAEPKSVMDMALIPNIDPRDIGLGSSEKGNVGPAAKPRKKTMTSVYLKFFETAPDGKS 71

Query: 288 RRCKFCKQSYAMSTATGNLGRHLNHHHPGYDRQSD 392
           RRCKFC QSY+++TATGNLGRHL++ HPGYD+  D
Sbjct: 72  RRCKFCGQSYSIATATGNLGRHLSNRHPGYDKSGD 106


>ref|XP_002317927.1| predicted protein [Populus trichocarpa] gi|222858600|gb|EEE96147.1|
           predicted protein [Populus trichocarpa]
          Length = 680

 Score =  132 bits (333), Expect = 2e-29
 Identities = 61/90 (67%), Positives = 76/90 (84%)
 Frame = +3

Query: 126 KIMMDVSLLPNVDSIEFGIGSSEKGNTLTTGKPRKKSMTSLYLKFFETAPDGKSRRCKFC 305
           K MMDV+L+ NVD ++ G+GSSEKG T+     RKK+MTS+YLKFFETAPDGKSRRCKFC
Sbjct: 19  KSMMDVALIQNVDPVDIGLGSSEKG-TIVVPTKRKKTMTSVYLKFFETAPDGKSRRCKFC 77

Query: 306 KQSYAMSTATGNLGRHLNHHHPGYDRQSDT 395
            QSY+++TATGNLGRHL++ HPGYD+  D+
Sbjct: 78  GQSYSIATATGNLGRHLSNRHPGYDKSGDS 107


>ref|NP_173291.4| BED zinc finger and hAT dimerization domain-containing protein
           [Arabidopsis thaliana] gi|332191608|gb|AEE29729.1| BED
           zinc finger and hAT dimerization domain-containing
           protein [Arabidopsis thaliana]
          Length = 690

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/92 (59%), Positives = 74/92 (80%)
 Frame = +3

Query: 108 YSETGTKIMMDVSLLPNVDSIEFGIGSSEKGNTLTTGKPRKKSMTSLYLKFFETAPDGKS 287
           Y E   K MMD++L+P+ D I+ G+GSS+K N++     RKK+MTS+YLK+FETAPD K+
Sbjct: 12  YKEMEPKAMMDMTLVPHSDPIDIGLGSSDKSNSVPP--KRKKTMTSVYLKYFETAPDSKT 69

Query: 288 RRCKFCKQSYAMSTATGNLGRHLNHHHPGYDR 383
           R+CKFC QSY+++TATGNLGRHL + HPGYD+
Sbjct: 70  RKCKFCGQSYSIATATGNLGRHLTNRHPGYDK 101


>gb|AAF98418.1|AC026238_10 Hypothetical protein [Arabidopsis thaliana]
          Length = 742

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/92 (59%), Positives = 74/92 (80%)
 Frame = +3

Query: 108 YSETGTKIMMDVSLLPNVDSIEFGIGSSEKGNTLTTGKPRKKSMTSLYLKFFETAPDGKS 287
           Y E   K MMD++L+P+ D I+ G+GSS+K N++     RKK+MTS+YLK+FETAPD K+
Sbjct: 64  YKEMEPKAMMDMTLVPHSDPIDIGLGSSDKSNSVPP--KRKKTMTSVYLKYFETAPDSKT 121

Query: 288 RRCKFCKQSYAMSTATGNLGRHLNHHHPGYDR 383
           R+CKFC QSY+++TATGNLGRHL + HPGYD+
Sbjct: 122 RKCKFCGQSYSIATATGNLGRHLTNRHPGYDK 153


>ref|XP_002457495.1| hypothetical protein SORBIDRAFT_03g008300 [Sorghum bicolor]
           gi|241929470|gb|EES02615.1| hypothetical protein
           SORBIDRAFT_03g008300 [Sorghum bicolor]
          Length = 703

 Score =  107 bits (266), Expect = 1e-21
 Identities = 47/86 (54%), Positives = 62/86 (72%)
 Frame = +3

Query: 120 GTKIMMDVSLLPNVDSIEFGIGSSEKGNTLTTGKPRKKSMTSLYLKFFETAPDGKSRRCK 299
           G   + D++LLP V+ +  G+ +    +    GK RKK M SLYLKFF+TAPDGKSR C+
Sbjct: 2   GNSTLTDMTLLPGVEPVVAGLAAGSSSSPGQEGKARKKPMKSLYLKFFDTAPDGKSRICR 61

Query: 300 FCKQSYAMSTATGNLGRHLNHHHPGY 377
            C++SY M+TATGNLG+HLN+ HPGY
Sbjct: 62  LCRKSYCMTTATGNLGKHLNNRHPGY 87


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