BLASTX nr result

ID: Dioscorea21_contig00025603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025603
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003560004.1| PREDICTED: cyclin-H1-1-like [Brachypodium di...    94   1e-17
gb|AAD02871.1| CAK associated cyclinH homolog [Populus tremula x...    92   6e-17
ref|XP_002284178.1| PREDICTED: cyclin-H1-1 [Vitis vinifera] gi|2...    92   6e-17
ref|XP_002330144.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
gb|ABK96417.1| unknown [Populus trichocarpa x Populus deltoides]       92   6e-17

>ref|XP_003560004.1| PREDICTED: cyclin-H1-1-like [Brachypodium distachyon]
          Length = 328

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 51/82 (62%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
 Frame = +1

Query: 4   RWIFSLLDLVGQHETANQRAAKMLEQYGTTHPEVS-VDGSLSYPEPIHDQRENERQSTSK 180
           RWIF   DL+ +   ANQR+A+ L QYGTT  +V  VDGS+SYPEP  D       S+ K
Sbjct: 12  RWIFQPHDLMDKWAAANQRSAETLAQYGTTRLKVDPVDGSISYPEPAPDHVVGS--SSVK 69

Query: 181 PLSCEEEQLMQVFYEQKIQEVC 246
           PLSCEEEQLM+VFYEQKIQEVC
Sbjct: 70  PLSCEEEQLMRVFYEQKIQEVC 91


>gb|AAD02871.1| CAK associated cyclinH homolog [Populus tremula x Populus
           tremuloides]
          Length = 332

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
 Frame = +1

Query: 1   SRWIFSLLDLVGQHETANQRAAKMLEQYGTTHPEVSVDGSLSYPEPIHDQREN-ERQSTS 177
           ++WIF+   L  +++  N RA +MLE+YGTT   V VDGSLSYPEP  +  EN ++ S S
Sbjct: 11  AKWIFTPQQLAEKYKATNNRAKQMLEKYGTTRMRVDVDGSLSYPEPQVNMTENADKHSRS 70

Query: 178 KPLSCEEEQLMQVFYEQKIQEVC 246
           KP+S EEEQ M+V+YE K++EVC
Sbjct: 71  KPISVEEEQFMRVYYEYKLREVC 93


>ref|XP_002284178.1| PREDICTED: cyclin-H1-1 [Vitis vinifera]
           gi|296089659|emb|CBI39478.3| unnamed protein product
           [Vitis vinifera]
          Length = 335

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/83 (54%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
 Frame = +1

Query: 1   SRWIFSLLDLVGQHETANQRAAKMLEQYGTTHPEVSVDGSLSYPEPIHDQREN-ERQSTS 177
           S+WIF+  DL+ +++ ANQRA + LE+YG T  EV  DGSL YPEP    ++N E++S  
Sbjct: 11  SKWIFTPQDLIEKYKAANQRAKQTLEKYGVTRIEVDADGSLQYPEPQISAKDNAEKRSRP 70

Query: 178 KPLSCEEEQLMQVFYEQKIQEVC 246
           KPL+ EEE+ M+ FYE KIQEVC
Sbjct: 71  KPLNFEEERFMRSFYEYKIQEVC 93


>ref|XP_002330144.1| predicted protein [Populus trichocarpa] gi|222871600|gb|EEF08731.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
 Frame = +1

Query: 1   SRWIFSLLDLVGQHETANQRAAKMLEQYGTTHPEVSVDGSLSYPEPIHDQREN-ERQSTS 177
           ++WIF+   L  +++  N RA +MLE+YGTT   V VDGSLSYPEP  +  EN ++ S S
Sbjct: 11  AKWIFTPQQLAEKYKATNNRAKQMLEKYGTTRMRVDVDGSLSYPEPQVNMTENADKHSRS 70

Query: 178 KPLSCEEEQLMQVFYEQKIQEVC 246
           KP+S EEEQ M+V+YE K++EVC
Sbjct: 71  KPISVEEEQFMRVYYEYKLREVC 93


>gb|ABK96417.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 363

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
 Frame = +1

Query: 1   SRWIFSLLDLVGQHETANQRAAKMLEQYGTTHPEVSVDGSLSYPEPIHDQREN-ERQSTS 177
           ++WIF+   L  +++  N RA +MLE+YGTT   V VDGSLSYPEP  +  EN ++ S S
Sbjct: 11  AKWIFTPQQLAEKYKATNNRAKQMLEKYGTTRMRVDVDGSLSYPEPQVNMTENADKHSRS 70

Query: 178 KPLSCEEEQLMQVFYEQKIQEVC 246
           KP+S EEEQ M+V+YE K++EVC
Sbjct: 71  KPISVEEEQFMRVYYEYKLREVC 93


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