BLASTX nr result
ID: Dioscorea21_contig00025595
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00025595 (642 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas... 80 3e-13 gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ... 78 2e-12 emb|CAN64437.1| hypothetical protein VITISV_011228 [Vitis vinifera] 78 2e-12 emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera] 77 3e-12 emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera] 74 2e-11 >gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula] Length = 1297 Score = 80.5 bits (197), Expect = 3e-13 Identities = 41/89 (46%), Positives = 55/89 (61%) Frame = -1 Query: 642 KIHNVFHVSKLKRFVGDPNVEARTLPDEFLTQHPLREPENILKTREVLRQGRIFTEILVH 463 ++H+VFHVS LK+ VG+ + E LPD + + EPE +L R + QG ++LVH Sbjct: 1171 RVHSVFHVSLLKKAVGNYH-EEENLPDLEEDKGVVIEPETVLTRRTIQVQGEKIDQVLVH 1229 Query: 462 WKGQSVDEATWEDAKDFHMTFPDFILEDK 376 W GQ V+EATWED FP+F LEDK Sbjct: 1230 WMGQKVEEATWEDTLIIRSQFPNFYLEDK 1258 >gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris] Length = 1631 Score = 77.8 bits (190), Expect = 2e-12 Identities = 40/89 (44%), Positives = 51/89 (57%) Frame = -1 Query: 642 KIHNVFHVSKLKRFVGDPNVEARTLPDEFLTQHPLREPENILKTREVLRQGRIFTEILVH 463 KIH VFHVS LK+ VG+ V P + + EPE +L R++ + + FTE L+ Sbjct: 1505 KIHPVFHVSLLKKVVGNTPVLPTIPPHIDVDMELVVEPEELLDVRQIRQGKQTFTECLIK 1564 Query: 462 WKGQSVDEATWEDAKDFHMTFPDFILEDK 376 WKG EATWED H+ FP F LEDK Sbjct: 1565 WKGLPAFEATWEDMSPIHLRFPSFHLEDK 1593 >emb|CAN64437.1| hypothetical protein VITISV_011228 [Vitis vinifera] Length = 623 Score = 77.8 bits (190), Expect = 2e-12 Identities = 40/88 (45%), Positives = 50/88 (56%) Frame = -1 Query: 639 IHNVFHVSKLKRFVGDPNVEARTLPDEFLTQHPLREPENILKTREVLRQGRIFTEILVHW 460 IH VFHV LK+ +GD N TLP + EP I+ TR + G+ F E LV W Sbjct: 510 IHPVFHVXLLKKTIGDSNARCPTLPPLTDDGALIIEPXEIIDTRWFXKGGKFFEECLVKW 569 Query: 459 KGQSVDEATWEDAKDFHMTFPDFILEDK 376 K V++ATWE+A + H FPD LEDK Sbjct: 570 KNLPVEDATWENAXELHDRFPDLNLEDK 597 >emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera] Length = 647 Score = 77.0 bits (188), Expect = 3e-12 Identities = 41/89 (46%), Positives = 51/89 (57%) Frame = -1 Query: 642 KIHNVFHVSKLKRFVGDPNVEARTLPDEFLTQHPLREPENILKTREVLRQGRIFTEILVH 463 +IH VFHVS LK+ +GD N TLP + EP I+ TR + G F E LV Sbjct: 533 RIHPVFHVSLLKKTIGDSNACCPTLPPLTDDGAFIIEPTEIIDTRWFKKGGNFFEECLVK 592 Query: 462 WKGQSVDEATWEDAKDFHMTFPDFILEDK 376 WK V++ATWE+A + H FPD LEDK Sbjct: 593 WKNLLVEDATWENAAELHDRFPDLNLEDK 621 >emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera] Length = 1384 Score = 74.3 bits (181), Expect = 2e-11 Identities = 43/93 (46%), Positives = 53/93 (56%) Frame = -1 Query: 642 KIHNVFHVSKLKRFVGDPNVEARTLPDEFLTQHPLREPENILKTREVLRQGRIFTEILVH 463 KIH +FHVS LK+ +G+PN LP + EPE IL TR V + RIF E LV Sbjct: 1270 KIHPIFHVSLLKKKLGEPNNTTVELPLTDDEGEIVLEPEGILDTRWVKKGSRIFEESLVK 1329 Query: 462 WKGQSVDEATWEDAKDFHMTFPDFILEDKDKIQ 364 WK +D+ATWED K F + LEDK +Q Sbjct: 1330 WKRLPLDDATWEDTKMLRDRFINVNLEDKVLVQ 1362