BLASTX nr result

ID: Dioscorea21_contig00025582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025582
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vit...   107   1e-21
ref|XP_002511787.1| DNA binding protein, putative [Ricinus commu...    96   2e-18
ref|NP_001169528.1| uncharacterized protein LOC100383402 [Zea ma...    95   5e-18
tpg|DAA40583.1| TPA: hypothetical protein ZEAMMB73_816984 [Zea m...    94   1e-17
ref|XP_002460545.1| hypothetical protein SORBIDRAFT_02g030290 [S...    94   1e-17

>ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vitis vinifera]
           gi|296089141|emb|CBI38844.3| unnamed protein product
           [Vitis vinifera]
          Length = 667

 Score =  107 bits (266), Expect = 1e-21
 Identities = 57/99 (57%), Positives = 72/99 (72%)
 Frame = +3

Query: 54  ESIDLSDKPDVPHILIDDGCWFLLTDENIELVKAAFPDKVDKFTQEKKLKGLPSKQRKAN 233
           ESIDL D+ +VP I +DDGCWFLLTDEN++LV+AAFP++V++F  EK+LK   SK+R  +
Sbjct: 535 ESIDLLDECNVPQIHVDDGCWFLLTDENMDLVRAAFPEEVNRFLLEKELK--ESKRRNKS 592

Query: 234 SRSGKSKTDAGDESPKSTHVQLSITEFYRSTKVTFQPKP 350
               +   +  D SPKS  VQLSITEFYRS KV F  KP
Sbjct: 593 GLRSEGVEEMPD-SPKSKGVQLSITEFYRSAKVIFHEKP 630


>ref|XP_002511787.1| DNA binding protein, putative [Ricinus communis]
           gi|223548967|gb|EEF50456.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 609

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 54/108 (50%), Positives = 72/108 (66%)
 Frame = +3

Query: 15  EHTEFEPEALGATESIDLSDKPDVPHILIDDGCWFLLTDENIELVKAAFPDKVDKFTQEK 194
           E  + + + +   ESID  ++ +VP   +DDGCWFLLTDEN++LV+ AFPD VDKF +EK
Sbjct: 469 ELDKHQEDIVKTDESIDQLEEYNVPKSYVDDGCWFLLTDENMDLVQNAFPDAVDKFLKEK 528

Query: 195 KLKGLPSKQRKANSRSGKSKTDAGDESPKSTHVQLSITEFYRSTKVTF 338
           + K     +R+ +S + KS      ES KS  VQL+ITEFYRSTKV F
Sbjct: 529 EQK---ESKRRLSSSTEKS------ESVKSKGVQLNITEFYRSTKVQF 567


>ref|NP_001169528.1| uncharacterized protein LOC100383402 [Zea mays]
           gi|224029901|gb|ACN34026.1| unknown [Zea mays]
           gi|414886336|tpg|DAA62350.1| TPA: hypothetical protein
           ZEAMMB73_316768 [Zea mays]
          Length = 638

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 55/98 (56%), Positives = 70/98 (71%), Gaps = 6/98 (6%)
 Frame = +3

Query: 54  ESIDLSDKPDVPHILIDDGCWFLLTDENIELVKAAFPDKVDKFTQEKKLKGLPSKQRKAN 233
           ES +L D+PDVP +L+DDGC FLLTDE+I+LV AAFP +  +F +E++LK       +A 
Sbjct: 500 ESPELLDEPDVPQVLMDDGCCFLLTDEDIQLVGAAFPKETARFQEEQRLK-------EAR 552

Query: 234 SRSGKSKT---DAGDESPKS---THVQLSITEFYRSTK 329
           SRS KSKT   D+G E+PK    + VQLSITEFYRS K
Sbjct: 553 SRSRKSKTSLADSGCETPKGPRPSGVQLSITEFYRSKK 590


>tpg|DAA40583.1| TPA: hypothetical protein ZEAMMB73_816984 [Zea mays]
          Length = 636

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/98 (53%), Positives = 67/98 (68%), Gaps = 6/98 (6%)
 Frame = +3

Query: 54  ESIDLSDKPDVPHILIDDGCWFLLTDENIELVKAAFPDKVDKFTQEKKLKGLPSKQRKAN 233
           ES +L D+PDVP +LIDDGC F+LTDE+I+LV AAFP +  +F +E++LK       +A 
Sbjct: 501 ESPELLDEPDVPQVLIDDGCCFVLTDEDIQLVGAAFPKETARFQEEQRLK-------EAR 553

Query: 234 SRSGKSKTDAGD------ESPKSTHVQLSITEFYRSTK 329
           SRS KSK+   D      E P+ + VQLSITEFYRS K
Sbjct: 554 SRSRKSKSSLADSACKTPEGPRPSGVQLSITEFYRSKK 591


>ref|XP_002460545.1| hypothetical protein SORBIDRAFT_02g030290 [Sorghum bicolor]
           gi|241923922|gb|EER97066.1| hypothetical protein
           SORBIDRAFT_02g030290 [Sorghum bicolor]
          Length = 590

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 54/108 (50%), Positives = 70/108 (64%), Gaps = 6/108 (5%)
 Frame = +3

Query: 24  EFEPEALGATESIDLSDKPDVPHILIDDGCWFLLTDENIELVKAAFPDKVDKFTQEKKLK 203
           E + E     ES +L D+PDVP +LIDDGC FLLTDE+I+LV AAFP +  +F +E++LK
Sbjct: 445 EDDDEDTVVCESPELLDEPDVPQVLIDDGCTFLLTDEDIQLVGAAFPKETARFQEEQRLK 504

Query: 204 GLPSKQRKANSRSGKSKTDAGD------ESPKSTHVQLSITEFYRSTK 329
                  +A SRS KSK+   D      + P+ + VQLSITEFYRS K
Sbjct: 505 -------EARSRSRKSKSSLADTACETPKGPRPSGVQLSITEFYRSKK 545


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