BLASTX nr result

ID: Dioscorea21_contig00025556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025556
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ87975.1| predicted protein [Hordeum vulgare subsp. vulgare]    108   2e-24
tpg|DAA55685.1| TPA: hypothetical protein ZEAMMB73_456953 [Zea m...   104   2e-22
emb|CBI30274.3| unnamed protein product [Vitis vinifera]              100   1e-21
ref|XP_002277002.1| PREDICTED: BTB/POZ domain-containing protein...   100   1e-20
emb|CAN68472.1| hypothetical protein VITISV_009362 [Vitis vinifera]   100   2e-19

>dbj|BAJ87975.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 957

 Score =  108 bits (270), Expect(2) = 2e-24
 Identities = 63/123 (51%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
 Frame = +1

Query: 112 SSSFAKIPYDLLRSIIEHSYLTVESEMQLCDALLNWLS-INSSFSDCLSVDCGNHYFHIL 288
           S SFA IPYDLL S IE  +LTV+SE QLC+A+L+W S I     + +S    N  F +L
Sbjct: 185 SRSFAHIPYDLLCSTIESPHLTVDSEKQLCEAILSWGSAIRQPCEESVSNSADNQLF-LL 243

Query: 289 KKVRICLLPLWFAAAKKRCFFEYADKCVTAILYLMENYHTSLLSAVPNGVLDNYRIRLTK 468
            KVR+CLLPL FAA  KR  FE+ +  V  IL L+++   +LL  V +  LD+YRIRLT+
Sbjct: 244 SKVRVCLLPLGFAAGTKRNCFEFGNNAVCTILNLLKDSLQTLLYTVTDDNLDSYRIRLTE 303

Query: 469 YSK 477
           YSK
Sbjct: 304 YSK 306



 Score = 28.9 bits (63), Expect(2) = 2e-24
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 42  GIGFIQETCEDYLARNFVDV 101
           G+ F+++ C  YLA+NFV V
Sbjct: 163 GVTFVEDVCPGYLAQNFVQV 182


>tpg|DAA55685.1| TPA: hypothetical protein ZEAMMB73_456953 [Zea mays]
          Length = 525

 Score =  104 bits (260), Expect(2) = 2e-22
 Identities = 61/123 (49%), Positives = 83/123 (67%), Gaps = 3/123 (2%)
 Frame = +1

Query: 118 SFAKIPYDLLRSIIEHSYLTVESEMQLCDALLNWLSINSSF---SDCLSVDCGNHYFHIL 288
           SF KIPYDLL S I+  +LTV+SE QLC+A+L W+S N      S+  SVD   H F + 
Sbjct: 188 SFNKIPYDLLCSAIKCPHLTVDSEKQLCEAILYWVSENMKACEQSNPNSVD--GHLFILS 245

Query: 289 KKVRICLLPLWFAAAKKRCFFEYADKCVTAILYLMENYHTSLLSAVPNGVLDNYRIRLTK 468
           K+V+ICLLPL FAA   R +F++ +K +  IL L+++   +LL AV +G LD Y IR+T+
Sbjct: 246 KQVKICLLPLGFAAGTMRHWFDFGNKIICTILDLLKDSLKTLLDAVDDGNLDRYCIRITE 305

Query: 469 YSK 477
           YSK
Sbjct: 306 YSK 308



 Score = 26.2 bits (56), Expect(2) = 2e-22
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +3

Query: 42  GIGFIQETCEDYLARNF 92
           G+ F+Q+ C+ +LA+NF
Sbjct: 164 GVTFVQDICQKFLAQNF 180


>emb|CBI30274.3| unnamed protein product [Vitis vinifera]
          Length = 1010

 Score =  100 bits (248), Expect(2) = 1e-21
 Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 5/131 (3%)
 Frame = +1

Query: 100 WTMLSSSFAKIPYDLLRSIIEHSYLTVESEMQLCDALLNWLSIN---SSFSDCLSVDCGN 270
           W M  +S+  +PY++L +   H  LTV+SE  L DALL WL+ N   S  S CL  DC +
Sbjct: 211 WAMSCNSYGNLPYNMLIACTRHPELTVDSEKHLSDALLVWLAANPELSECSSCLEDDCTD 270

Query: 271 HYFHILKKVRICLLPLWFAAAKKRC--FFEYADKCVTAILYLMENYHTSLLSAVPNGVLD 444
               +LK++R+ LLPLWF+A KK C  F + ADK + AIL L+++  T L+  + +  L 
Sbjct: 271 ----VLKQIRVNLLPLWFSAGKKWCCYFSKLADKSINAILSLVKHPSTGLVIDLGDEDLL 326

Query: 445 NYRIRLTKYSK 477
             RIRLTKY+K
Sbjct: 327 QLRIRLTKYTK 337



 Score = 27.7 bits (60), Expect(2) = 1e-21
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +3

Query: 51  FIQETCEDYLARNFVDVD 104
           FI E C  YLARNFV +D
Sbjct: 166 FIPELCTMYLARNFVCID 183


>ref|XP_002277002.1| PREDICTED: BTB/POZ domain-containing protein FBL11-like [Vitis
           vinifera]
          Length = 980

 Score =  100 bits (248), Expect(2) = 1e-20
 Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 5/131 (3%)
 Frame = +1

Query: 100 WTMLSSSFAKIPYDLLRSIIEHSYLTVESEMQLCDALLNWLSIN---SSFSDCLSVDCGN 270
           W M  +S+  +PY++L +   H  LTV+SE  L DALL WL+ N   S  S CL  DC +
Sbjct: 181 WAMSCNSYGNLPYNMLIACTRHPELTVDSEKHLSDALLVWLAANPELSECSSCLEDDCTD 240

Query: 271 HYFHILKKVRICLLPLWFAAAKKRC--FFEYADKCVTAILYLMENYHTSLLSAVPNGVLD 444
               +LK++R+ LLPLWF+A KK C  F + ADK + AIL L+++  T L+  + +  L 
Sbjct: 241 ----VLKQIRVNLLPLWFSAGKKWCCYFSKLADKSINAILSLVKHPSTGLVIDLGDEDLL 296

Query: 445 NYRIRLTKYSK 477
             RIRLTKY+K
Sbjct: 297 QLRIRLTKYTK 307



 Score = 24.3 bits (51), Expect(2) = 1e-20
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +3

Query: 51  FIQETCEDYLARNFV 95
           FI E C  YLARNF+
Sbjct: 166 FIPELCTMYLARNFM 180


>emb|CAN68472.1| hypothetical protein VITISV_009362 [Vitis vinifera]
          Length = 871

 Score =  100 bits (248), Expect = 2e-19
 Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 5/131 (3%)
 Frame = +1

Query: 100 WTMLSSSFAKIPYDLLRSIIEHSYLTVESEMQLCDALLNWLSIN---SSFSDCLSVDCGN 270
           W M  +S+  +PY++L +   H  LTV+SE  L DALL WL+ N   S  S CL  DC +
Sbjct: 99  WAMSCNSYGNLPYNMLIACTRHPELTVDSEKHLSDALLVWLAANPELSECSSCLEDDCTD 158

Query: 271 HYFHILKKVRICLLPLWFAAAKKRC--FFEYADKCVTAILYLMENYHTSLLSAVPNGVLD 444
               +LK++R+ LLPLWF+A KK C  F + ADK + AIL L+++  T L+  + +  L 
Sbjct: 159 ----VLKQIRVNLLPLWFSAGKKWCCYFSKLADKSINAILSLVKHPSTGLVIDLGDEDLL 214

Query: 445 NYRIRLTKYSK 477
             RIRLTKY+K
Sbjct: 215 QLRIRLTKYTK 225


Top