BLASTX nr result

ID: Dioscorea21_contig00025537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025537
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003562823.1| PREDICTED: ruvB-like 2-like [Brachypodium di...   332   1e-88
dbj|BAK05068.1| predicted protein [Hordeum vulgare subsp. vulgare]    331   1e-88
ref|NP_001057013.2| Os06g0186900 [Oryza sativa Japonica Group] g...   328   9e-88
ref|XP_002460919.1| hypothetical protein SORBIDRAFT_02g037530 [S...   328   2e-87
ref|NP_001150627.1| ruvB-like 2 [Zea mays] gi|195638154|gb|ACG38...   325   1e-86

>ref|XP_003562823.1| PREDICTED: ruvB-like 2-like [Brachypodium distachyon]
          Length = 476

 Score =  332 bits (850), Expect = 1e-88
 Identities = 182/268 (67%), Positives = 203/268 (75%), Gaps = 9/268 (3%)
 Frame = +3

Query: 210 MAEIKKPLGINDRTKIERIGVHSHIRXXXXXXXXXXXXXXXXMVGQLPARRAAGLILQLV 389
           M+E+K+     D T+IERIG HSHIR                MVGQLPARRAAGLILQL+
Sbjct: 1   MSELKRLSESRDLTRIERIGAHSHIRGLGLDSSLEARDASEGMVGQLPARRAAGLILQLI 60

Query: 390 REGRISGRAVLLAGQPGTGKTAIAMGLAKSLGLETPXXXXXXXXXXXXXXXKTEALTQAF 569
           R+G+I+GRAVLLAGQPGTGKTA+AMG+AKSLG ETP               KTEALTQAF
Sbjct: 61  RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAF 120

Query: 570 RRAISVRITEEVEIIEGQVVKITINRP---ASGERGA------AWKTGKLTLKTTDMEAV 722
           RRAI VRI EE EIIEG+VV+I+I+RP   ASG  GA      A KTG+LTLKTTDME V
Sbjct: 121 RRAIGVRIKEEAEIIEGEVVEISIDRPLSAASGSSGAPSGAAAAGKTGRLTLKTTDMETV 180

Query: 723 FELGGKMIEALMKEKVQIGDVVTLDKASGKVTNLGRSTWTTMNYDAVGSRTKFVRCPEGE 902
           +ELGGKMIEAL KEKVQ GDV+ LDKASGKVT LGRS   + +YDAVG+ TKFV+CPEGE
Sbjct: 181 YELGGKMIEALGKEKVQSGDVIALDKASGKVTKLGRSIGRSRDYDAVGAHTKFVKCPEGE 240

Query: 903 LQKRKEVVQCVTLHEIDVINSRTQGFLA 986
           LQKRKEVV CVTLHEIDVINSRTQGFLA
Sbjct: 241 LQKRKEVVHCVTLHEIDVINSRTQGFLA 268


>dbj|BAK05068.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 496

 Score =  331 bits (849), Expect = 1e-88
 Identities = 180/267 (67%), Positives = 200/267 (74%), Gaps = 8/267 (2%)
 Frame = +3

Query: 210 MAEIKKPLGINDRTKIERIGVHSHIRXXXXXXXXXXXXXXXXMVGQLPARRAAGLILQLV 389
           MAE+K+     D T+IERIG HSHIR                MVGQLPARRAAGLILQL+
Sbjct: 22  MAELKRLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLI 81

Query: 390 REGRISGRAVLLAGQPGTGKTAIAMGLAKSLGLETPXXXXXXXXXXXXXXXKTEALTQAF 569
           R+G+I+GRAVLLAGQPGTGKTA+AMG+AKSLG ETP               KTEALTQAF
Sbjct: 82  RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAF 141

Query: 570 RRAISVRITEEVEIIEGQVVKITINRPASGERG--------AAWKTGKLTLKTTDMEAVF 725
           RRAI VRI EE EIIEG+VV+I+I+RP S            AA KTG+LTLKTTDME V+
Sbjct: 142 RRAIGVRIKEEAEIIEGEVVEISIDRPVSASSSSGIPSGAAAAGKTGRLTLKTTDMETVY 201

Query: 726 ELGGKMIEALMKEKVQIGDVVTLDKASGKVTNLGRSTWTTMNYDAVGSRTKFVRCPEGEL 905
           ELGGKMIEAL KEKVQ GDV+ LDKASGKVT LGRS   + +YDAVGS TKFV+CPEGEL
Sbjct: 202 ELGGKMIEALGKEKVQSGDVIALDKASGKVTKLGRSIGRSRDYDAVGSHTKFVKCPEGEL 261

Query: 906 QKRKEVVQCVTLHEIDVINSRTQGFLA 986
           QKRKEV+ CVTLHEIDVINSRTQGFLA
Sbjct: 262 QKRKEVMHCVTLHEIDVINSRTQGFLA 288


>ref|NP_001057013.2| Os06g0186900 [Oryza sativa Japonica Group]
           gi|55773868|dbj|BAD72453.1| putative DNA helicase [Oryza
           sativa Japonica Group] gi|125596298|gb|EAZ36078.1|
           hypothetical protein OsJ_20388 [Oryza sativa Japonica
           Group] gi|215740495|dbj|BAG97151.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|255676797|dbj|BAF18927.2| Os06g0186900 [Oryza sativa
           Japonica Group]
          Length = 476

 Score =  328 bits (842), Expect = 9e-88
 Identities = 180/269 (66%), Positives = 199/269 (73%), Gaps = 10/269 (3%)
 Frame = +3

Query: 210 MAEIKKPLGINDRTKIERIGVHSHIRXXXXXXXXXXXXXXXXMVGQLPARRAAGLILQLV 389
           MAE+K+     D T+IERIG HSHIR                MVGQLPARRAAGLILQL+
Sbjct: 1   MAELKRLSESRDLTRIERIGAHSHIRGLGLDSSLEARGSSEGMVGQLPARRAAGLILQLI 60

Query: 390 REGRISGRAVLLAGQPGTGKTAIAMGLAKSLGLETPXXXXXXXXXXXXXXXKTEALTQAF 569
           R+G+I+GRAVLLAGQPGTGKTA+AMG+AKSLG ETP               KTEALTQAF
Sbjct: 61  RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAF 120

Query: 570 RRAISVRITEEVEIIEGQVVKITINRPASGERGA----------AWKTGKLTLKTTDMEA 719
           RR+I VRI EE EIIEG+VV+I+I+RP S    A          A KTG+LTLKTTDME 
Sbjct: 121 RRSIGVRIKEEAEIIEGEVVEISIDRPVSAAAAAGSSAPSGVAAAGKTGRLTLKTTDMET 180

Query: 720 VFELGGKMIEALMKEKVQIGDVVTLDKASGKVTNLGRSTWTTMNYDAVGSRTKFVRCPEG 899
           V+ELGGKMIEAL KEKVQ GDVV LDKASGKVT LGRS   + +YDAVG  TKFV+CPEG
Sbjct: 181 VYELGGKMIEALGKEKVQSGDVVALDKASGKVTKLGRSIGRSRDYDAVGPHTKFVKCPEG 240

Query: 900 ELQKRKEVVQCVTLHEIDVINSRTQGFLA 986
           ELQKRKEVV CVTLHEIDVINSRTQGFLA
Sbjct: 241 ELQKRKEVVHCVTLHEIDVINSRTQGFLA 269


>ref|XP_002460919.1| hypothetical protein SORBIDRAFT_02g037530 [Sorghum bicolor]
           gi|241924296|gb|EER97440.1| hypothetical protein
           SORBIDRAFT_02g037530 [Sorghum bicolor]
          Length = 480

 Score =  328 bits (840), Expect = 2e-87
 Identities = 181/270 (67%), Positives = 202/270 (74%), Gaps = 11/270 (4%)
 Frame = +3

Query: 210 MAEIKKPLGINDRTKIERIGVHSHIRXXXXXXXXXXXXXXXXMVGQLPARRAAGLILQLV 389
           MAE+K+     D T+IERIG HSHIR                MVGQLPARRAAGLILQL+
Sbjct: 1   MAELKRLSESRDLTRIERIGAHSHIRGLGLDSSMEARDASEGMVGQLPARRAAGLILQLI 60

Query: 390 REGRISGRAVLLAGQPGTGKTAIAMGLAKSLGLETPXXXXXXXXXXXXXXXKTEALTQAF 569
           R+G+I+GRAVLLAGQPGTGKTA+AMG+AKSLG ETP               KTEALTQAF
Sbjct: 61  RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAF 120

Query: 570 RRAISVRITEEVEIIEGQVVKITINRP--ASGERG---------AAWKTGKLTLKTTDME 716
           RRAI VRI EE EIIEG+VV+I+I+RP  ASG  G         AA K+G+LTLKTTDME
Sbjct: 121 RRAIGVRIKEEAEIIEGEVVEISIDRPLSASGAGGSSAAPSGATAAGKSGRLTLKTTDME 180

Query: 717 AVFELGGKMIEALMKEKVQIGDVVTLDKASGKVTNLGRSTWTTMNYDAVGSRTKFVRCPE 896
            V+ELGGKMIEAL KEKVQ GDV+ LDKASGKVT LGRS   + +YDAVG  TKFV+CP+
Sbjct: 181 TVYELGGKMIEALGKEKVQSGDVIALDKASGKVTKLGRSIGRSRDYDAVGPHTKFVKCPD 240

Query: 897 GELQKRKEVVQCVTLHEIDVINSRTQGFLA 986
           GELQKRKEVV CVTLHEIDVINSRTQGFLA
Sbjct: 241 GELQKRKEVVHCVTLHEIDVINSRTQGFLA 270


>ref|NP_001150627.1| ruvB-like 2 [Zea mays] gi|195638154|gb|ACG38545.1| ruvB-like 2 [Zea
           mays] gi|195640692|gb|ACG39814.1| ruvB-like 2 [Zea mays]
           gi|223948087|gb|ACN28127.1| unknown [Zea mays]
           gi|414590655|tpg|DAA41226.1| TPA: hypothetical protein
           ZEAMMB73_578307 [Zea mays]
          Length = 478

 Score =  325 bits (833), Expect = 1e-86
 Identities = 177/270 (65%), Positives = 198/270 (73%), Gaps = 11/270 (4%)
 Frame = +3

Query: 210 MAEIKKPLGINDRTKIERIGVHSHIRXXXXXXXXXXXXXXXXMVGQLPARRAAGLILQLV 389
           MAE+K+     D T+IERIG HSHIR                MVGQLPARRAAGLILQL+
Sbjct: 1   MAELKRLSESRDLTRIERIGAHSHIRGLGLDSSMEARDASEGMVGQLPARRAAGLILQLI 60

Query: 390 REGRISGRAVLLAGQPGTGKTAIAMGLAKSLGLETPXXXXXXXXXXXXXXXKTEALTQAF 569
           R+G+I+GRAVLLAGQPGTGKTA+AMG+AKSLG ETP               KTEALTQAF
Sbjct: 61  RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAF 120

Query: 570 RRAISVRITEEVEIIEGQVVKITINRPASGERG-----------AAWKTGKLTLKTTDME 716
           RRAI VRI EE EIIEG+VV+I I+RP S               AA K+G+LTLKTTDME
Sbjct: 121 RRAIGVRIKEETEIIEGEVVEILIDRPLSASAAGGSSAAPTGATAAGKSGRLTLKTTDME 180

Query: 717 AVFELGGKMIEALMKEKVQIGDVVTLDKASGKVTNLGRSTWTTMNYDAVGSRTKFVRCPE 896
            V+ELGGKMIEAL KEKVQ GDV+ LDKASGKVT LGRS   + +YDAVG  TKFV+CP+
Sbjct: 181 TVYELGGKMIEALGKEKVQSGDVIALDKASGKVTKLGRSIGRSRDYDAVGPHTKFVKCPD 240

Query: 897 GELQKRKEVVQCVTLHEIDVINSRTQGFLA 986
           GELQKRKE+V CVTLHEIDVINSRTQGFLA
Sbjct: 241 GELQKRKEIVHCVTLHEIDVINSRTQGFLA 270


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