BLASTX nr result

ID: Dioscorea21_contig00025521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025521
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299551.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
gb|AFW59267.1| hypothetical protein ZEAMMB73_197264 [Zea mays]         67   2e-09
gb|AFW59265.1| hypothetical protein ZEAMMB73_197264 [Zea mays]         67   2e-09
ref|XP_002448356.1| hypothetical protein SORBIDRAFT_06g025720 [S...    67   2e-09
ref|XP_002276624.2| PREDICTED: uncharacterized protein LOC100259...    62   6e-08

>ref|XP_002299551.1| predicted protein [Populus trichocarpa] gi|222846809|gb|EEE84356.1|
            predicted protein [Populus trichocarpa]
          Length = 1373

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 36/70 (51%), Positives = 49/70 (70%)
 Frame = -1

Query: 323  ELFLPKHDEVPDNLCGLILVIVRDQVVLSICQAAKDGYVWVLLDDCRSRVFSEAIGRLRQ 144
            E FLP  D V D++CGLI   +RD VVLSIC+A+ +GYVWVLLD   SR FS++   + +
Sbjct: 1179 ESFLPHVDTVLDHICGLIDDTLRDLVVLSICRASLEGYVWVLLDGGPSRAFSDSDITMME 1238

Query: 143  EGLNILEGLF 114
            + LN+L+  F
Sbjct: 1239 DDLNVLKEFF 1248


>gb|AFW59267.1| hypothetical protein ZEAMMB73_197264 [Zea mays]
          Length = 816

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/70 (50%), Positives = 46/70 (65%)
 Frame = -1

Query: 323 ELFLPKHDEVPDNLCGLILVIVRDQVVLSICQAAKDGYVWVLLDDCRSRVFSEAIGRLRQ 144
           ++F+P  D+V D +C LI+ ++RDQVVL I QA  DG +WVLLD   SR F E    L Q
Sbjct: 607 QIFIPTIDQVLDQVCDLIVDVLRDQVVLRIFQACMDGLIWVLLDGGPSRAFFETDVDLMQ 666

Query: 143 EGLNILEGLF 114
           + L IL+ LF
Sbjct: 667 QDLAILKDLF 676


>gb|AFW59265.1| hypothetical protein ZEAMMB73_197264 [Zea mays]
          Length = 607

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/70 (50%), Positives = 46/70 (65%)
 Frame = -1

Query: 323 ELFLPKHDEVPDNLCGLILVIVRDQVVLSICQAAKDGYVWVLLDDCRSRVFSEAIGRLRQ 144
           ++F+P  D+V D +C LI+ ++RDQVVL I QA  DG +WVLLD   SR F E    L Q
Sbjct: 398 QIFIPTIDQVLDQVCDLIVDVLRDQVVLRIFQACMDGLIWVLLDGGPSRAFFETDVDLMQ 457

Query: 143 EGLNILEGLF 114
           + L IL+ LF
Sbjct: 458 QDLAILKDLF 467


>ref|XP_002448356.1| hypothetical protein SORBIDRAFT_06g025720 [Sorghum bicolor]
            gi|241939539|gb|EES12684.1| hypothetical protein
            SORBIDRAFT_06g025720 [Sorghum bicolor]
          Length = 1054

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/70 (50%), Positives = 46/70 (65%)
 Frame = -1

Query: 323  ELFLPKHDEVPDNLCGLILVIVRDQVVLSICQAAKDGYVWVLLDDCRSRVFSEAIGRLRQ 144
            ++F+P  D+V D +C LI+ ++RDQVVL I QA  DG +WVLLD   SR F E    L Q
Sbjct: 844  QIFIPTIDQVLDQVCDLIVDVLRDQVVLRIFQACMDGLIWVLLDGGPSRAFFETDVDLMQ 903

Query: 143  EGLNILEGLF 114
            + L IL+ LF
Sbjct: 904  QDLAILKDLF 913


>ref|XP_002276624.2| PREDICTED: uncharacterized protein LOC100259829 [Vitis vinifera]
          Length = 1141

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 33/67 (49%), Positives = 45/67 (67%)
 Frame = -1

Query: 314  LPKHDEVPDNLCGLILVIVRDQVVLSICQAAKDGYVWVLLDDCRSRVFSEAIGRLRQEGL 135
            LP  D V D +C LI   +RD VVLSIC+AA + +VWVLLD   SR FS++   + ++ L
Sbjct: 932  LPHVDTVLDQICDLIDDALRDLVVLSICKAALEAFVWVLLDGGPSRAFSDSDIPMMEDDL 991

Query: 134  NILEGLF 114
            N+L+ LF
Sbjct: 992  NMLKDLF 998


Top