BLASTX nr result

ID: Dioscorea21_contig00025512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025512
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40732.3| unnamed protein product [Vitis vinifera]              227   1e-57
emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]   221   6e-56
ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|2...   214   9e-54
ref|XP_002865400.1| pentatricopeptide repeat-containing protein ...   202   5e-50
dbj|BAB11311.1| unnamed protein product [Arabidopsis thaliana]        199   3e-49

>emb|CBI40732.3| unnamed protein product [Vitis vinifera]
          Length = 520

 Score =  227 bits (579), Expect = 1e-57
 Identities = 104/197 (52%), Positives = 149/197 (75%)
 Frame = +2

Query: 2   GVFLQKLTGVSAVESALSSTGVDLNLEIFADVVDKGSLGGAPMVVLFDWALKQPRVSKCV 181
           GVF+Q+L G +A+E AL++ G+DL ++I ++V+++G+LGG  MV+ F+WA+KQP + K V
Sbjct: 66  GVFIQRLRGKAAIELALTNVGIDLTIDIVSEVINRGNLGGEAMVIFFNWAVKQPTIPKDV 125

Query: 182 EMYNVILKALGRRKFFTFVEEVLIRMKADEIKPNSETLEILIDSFVSARRVSKAVELFGR 361
           + YNVI+KALGRRKF  FV +VL  M    I PN ETL I++DSF+ AR+VSKA+E+F  
Sbjct: 126 DTYNVIIKALGRRKFIEFVVKVLKDMHIQGISPNYETLSIVMDSFIKARQVSKAIEMFRN 185

Query: 362 LEEIGSKCDTESLTIIMRSLCRRSHIKVANSLFNKMKGRIPYDSVVYNEIIGGWARFGRV 541
           LEE G KCDTESL ++++ LC+RSH+  AN  FN MKG IP++ + YN IIGGW+++G++
Sbjct: 186 LEEFGGKCDTESLNVLLQCLCQRSHVGAANLFFNAMKGGIPFNCMTYNIIIGGWSKYGKI 245

Query: 542 DKVETFWATMVDDGFNP 592
            ++E     MV DGF+P
Sbjct: 246 GEMERCLKAMVADGFSP 262


>emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]
          Length = 561

 Score =  221 bits (564), Expect = 6e-56
 Identities = 103/197 (52%), Positives = 145/197 (73%)
 Frame = +2

Query: 2   GVFLQKLTGVSAVESALSSTGVDLNLEIFADVVDKGSLGGAPMVVLFDWALKQPRVSKCV 181
           GVF+Q+L G +A+E AL++ G+DL ++I ++V ++G+LGG  MV  F+WA+KQP + K V
Sbjct: 107 GVFIQRLRGKAAIELALTNVGIDLTIDIVSEVXNRGNLGGEAMVXFFNWAVKQPTIPKDV 166

Query: 182 EMYNVILKALGRRKFFTFVEEVLIRMKADEIKPNSETLEILIDSFVSARRVSKAVELFGR 361
           + YNVI+KALGRRKF  F   VL  M    I PN ETL I++DSF+ AR+VSKA+E+F  
Sbjct: 167 DTYNVIIKALGRRKFIEFXVXVLKDMHIQGISPNYETLSIVMDSFIKARQVSKAIEMFRN 226

Query: 362 LEEIGSKCDTESLTIIMRSLCRRSHIKVANSLFNKMKGRIPYDSVVYNEIIGGWARFGRV 541
           LEE G KCDTESL ++++ LC+RSH+  AN  FN MKG IP++ + YN IIGGW+++G++
Sbjct: 227 LEEFGGKCDTESLNVLLQCLCQRSHVGAANLFFNAMKGGIPFNCMTYNIIIGGWSKYGKI 286

Query: 542 DKVETFWATMVDDGFNP 592
            ++E     MV DGF+P
Sbjct: 287 GEMERCLKAMVADGFSP 303


>ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|222857210|gb|EEE94757.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score =  214 bits (545), Expect = 9e-54
 Identities = 98/198 (49%), Positives = 148/198 (74%), Gaps = 1/198 (0%)
 Frame = +2

Query: 2   GVFLQKLTGVSAVESALSSTGVDLNLEIFADVVDKGSLGGAPMVVLFDWALKQPRVSKCV 181
           GVF+QK+ G S +E AL+   VDL+L++ A+V+++G+LGG  M++ F+WA+KQP +SK V
Sbjct: 108 GVFVQKIKGKSGIERALTECSVDLSLDVVAEVLNRGNLGGEAMIMFFNWAIKQPMISKDV 167

Query: 182 EMYNVILKALGRRKFFTFVEEVLIRMKADEIKPNSETLEILIDSFVSARRVSKAVELFGR 361
           + YNV+++ALGRRKF  F+ + L  ++ + +  NSET  I+IDS V ARRV KA+++FG 
Sbjct: 168 DSYNVVIRALGRRKFIDFMVKFLHELRVEGVSMNSETFSIVIDSLVRARRVYKAIQMFGN 227

Query: 362 L-EEIGSKCDTESLTIIMRSLCRRSHIKVANSLFNKMKGRIPYDSVVYNEIIGGWARFGR 538
           L EE G + D ESL ++++ LCRRSH+  ANS FN +KG+IP++ + YN IIGGW++FGR
Sbjct: 228 LEEEFGFERDAESLNVLLQCLCRRSHVGAANSYFNSVKGKIPFNCMTYNVIIGGWSKFGR 287

Query: 539 VDKVETFWATMVDDGFNP 592
           V +++  +  M +DGF+P
Sbjct: 288 VSEMQRVFEEMEEDGFSP 305


>ref|XP_002865400.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297311235|gb|EFH41659.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 675

 Score =  202 bits (513), Expect = 5e-50
 Identities = 97/197 (49%), Positives = 137/197 (69%)
 Frame = +2

Query: 2   GVFLQKLTGVSAVESALSSTGVDLNLEIFADVVDKGSLGGAPMVVLFDWALKQPRVSKCV 181
           GVFLQKL G SA+++ LSS G+DL+++I +DV+++G+L G  MV  F+WA+++P VSK V
Sbjct: 87  GVFLQKLKGKSAIQNCLSSLGIDLSIDIVSDVLNRGNLSGEAMVTFFNWAIREPGVSKDV 146

Query: 182 EMYNVILKALGRRKFFTFVEEVLIRMKADEIKPNSETLEILIDSFVSARRVSKAVELFGR 361
           + Y VIL+ALGRRKFF+F+ +VL  M  + + P+   L I +DSFV A  V +A+ELF  
Sbjct: 147 DSYCVILRALGRRKFFSFMMDVLRGMVCEGVNPDLRCLTIAMDSFVRAHYVRRAIELFEE 206

Query: 362 LEEIGSKCDTESLTIIMRSLCRRSHIKVANSLFNKMKGRIPYDSVVYNEIIGGWARFGRV 541
            E  G KC TES   ++R LC RSH+  ANS+FN  KG+IP+DS  YN +I GW++ G +
Sbjct: 207 SESYGVKCSTESFNALLRCLCERSHVSAANSVFNAKKGKIPFDSCSYNIMISGWSKLGEI 266

Query: 542 DKVETFWATMVDDGFNP 592
           + +E     MV+ GF P
Sbjct: 267 EGMEKVLKEMVEGGFVP 283


>dbj|BAB11311.1| unnamed protein product [Arabidopsis thaliana]
          Length = 680

 Score =  199 bits (506), Expect = 3e-49
 Identities = 96/197 (48%), Positives = 134/197 (68%)
 Frame = +2

Query: 2   GVFLQKLTGVSAVESALSSTGVDLNLEIFADVVDKGSLGGAPMVVLFDWALKQPRVSKCV 181
           GVFLQKL G SA++ +LSS G+ L+++I ADV+++G+L G  MV  FDWA+++P V+K V
Sbjct: 92  GVFLQKLKGKSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDV 151

Query: 182 EMYNVILKALGRRKFFTFVEEVLIRMKADEIKPNSETLEILIDSFVSARRVSKAVELFGR 361
             Y+VIL+ALGRRK F+F+ +VL  M  + + P+ E L I +DSFV    V +A+ELF  
Sbjct: 152 GSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEE 211

Query: 362 LEEIGSKCDTESLTIIMRSLCRRSHIKVANSLFNKMKGRIPYDSVVYNEIIGGWARFGRV 541
            E  G KC TES   ++R LC RSH+  A S+FN  KG IP+DS  YN +I GW++ G V
Sbjct: 212 SESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEV 271

Query: 542 DKVETFWATMVDDGFNP 592
           +++E     MV+ GF P
Sbjct: 272 EEMEKVLKEMVESGFGP 288