BLASTX nr result

ID: Dioscorea21_contig00025244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025244
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553993.1| PREDICTED: WD repeat-containing protein LWD1...   219   2e-55
ref|XP_003548808.1| PREDICTED: WD repeat-containing protein LWD1...   218   4e-55
ref|XP_002278469.1| PREDICTED: WD repeat-containing protein LWD1...   217   9e-55
ref|XP_002334240.1| predicted protein [Populus trichocarpa] gi|2...   213   1e-53
ref|XP_004145624.1| PREDICTED: WD repeat-containing protein LWD1...   213   1e-53

>ref|XP_003553993.1| PREDICTED: WD repeat-containing protein LWD1-like [Glycine max]
          Length = 344

 Score =  219 bits (557), Expect = 2e-55
 Identities = 100/120 (83%), Positives = 113/120 (94%)
 Frame = -1

Query: 361 AMNWSVRRDKKYRLAIASLMEQYQNRVEIVQLDDATGDIRSDPALSFEHPYPPTKTMFVP 182
           AMNWSVRRDKKYRLAIASL+EQY NRVEIVQLDD+ G+IRSDP+LSFEHPYPPTK++F+P
Sbjct: 32  AMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSNGEIRSDPSLSFEHPYPPTKSIFIP 91

Query: 181 DRDCVRQDLLATSADFLRLWHIHDDHVELKALLNGNKNSEFCGPLTSFDWNEAEPRRIGT 2
           D+DC R DLLATS+DFLR+WHI +  VELK+LLNGNKNSE+CGPLTSFDWNEAEPRRIGT
Sbjct: 92  DKDCHRPDLLATSSDFLRVWHISESSVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGT 151


>ref|XP_003548808.1| PREDICTED: WD repeat-containing protein LWD1-like [Glycine max]
          Length = 344

 Score =  218 bits (555), Expect = 4e-55
 Identities = 100/120 (83%), Positives = 112/120 (93%)
 Frame = -1

Query: 361 AMNWSVRRDKKYRLAIASLMEQYQNRVEIVQLDDATGDIRSDPALSFEHPYPPTKTMFVP 182
           AMNWSVRRDKKYRLAIASL+EQY NRVEIVQLDD+ G+IRSDP+LSFEHPYPPTK +F+P
Sbjct: 32  AMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSNGEIRSDPSLSFEHPYPPTKAIFIP 91

Query: 181 DRDCVRQDLLATSADFLRLWHIHDDHVELKALLNGNKNSEFCGPLTSFDWNEAEPRRIGT 2
           D+DC R DLLATS+DFLR+WHI +  VELK+LLNGNKNSE+CGPLTSFDWNEAEPRRIGT
Sbjct: 92  DKDCHRPDLLATSSDFLRVWHISESAVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGT 151


>ref|XP_002278469.1| PREDICTED: WD repeat-containing protein LWD1 isoform 1 [Vitis
           vinifera] gi|359488412|ref|XP_003633757.1| PREDICTED: WD
           repeat-containing protein LWD1 isoform 2 [Vitis
           vinifera] gi|113707436|gb|ABF66626.2| WD repeat 2 [Vitis
           vinifera]
          Length = 344

 Score =  217 bits (552), Expect = 9e-55
 Identities = 100/120 (83%), Positives = 112/120 (93%)
 Frame = -1

Query: 361 AMNWSVRRDKKYRLAIASLMEQYQNRVEIVQLDDATGDIRSDPALSFEHPYPPTKTMFVP 182
           AMNWSVRRDKKYRLAIASL+EQY NRVEIVQLDD+TG+IRSDP LSFEH YPPTKT+F+P
Sbjct: 32  AMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSTGEIRSDPNLSFEHHYPPTKTIFIP 91

Query: 181 DRDCVRQDLLATSADFLRLWHIHDDHVELKALLNGNKNSEFCGPLTSFDWNEAEPRRIGT 2
           D+DC + DLLATS+DFLR+W+I DD VELK LLNGN+NSEFCGPLTSFDWNEAEP+RIGT
Sbjct: 92  DKDCQKPDLLATSSDFLRVWNISDDRVELKCLLNGNRNSEFCGPLTSFDWNEAEPKRIGT 151


>ref|XP_002334240.1| predicted protein [Populus trichocarpa]
           gi|224131364|ref|XP_002321066.1| predicted protein
           [Populus trichocarpa] gi|222861839|gb|EEE99381.1|
           predicted protein [Populus trichocarpa]
           gi|222870324|gb|EEF07455.1| predicted protein [Populus
           trichocarpa]
          Length = 346

 Score =  213 bits (543), Expect = 1e-53
 Identities = 100/122 (81%), Positives = 113/122 (92%), Gaps = 2/122 (1%)
 Frame = -1

Query: 361 AMNWSVRRDKKYRLAIASLMEQYQNRVEIVQLDDATGDIRSDPALSFEHPYPPTKTMFVP 182
           AMNWSVRRDKKYRLAIASL+EQY NRVEIVQLDD+ G+IRSDP LSFEHPYPPTKT+F+P
Sbjct: 32  AMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSNGEIRSDPNLSFEHPYPPTKTIFIP 91

Query: 181 DRDCVRQDLLATSADFLRLWHIHDD--HVELKALLNGNKNSEFCGPLTSFDWNEAEPRRI 8
           D++C + DLLATS+DFLR+W I+D+   VELK+LLNGNKNSEFCGPLTSFDWNEAEPRRI
Sbjct: 92  DKECQKPDLLATSSDFLRVWRINDEQPRVELKSLLNGNKNSEFCGPLTSFDWNEAEPRRI 151

Query: 7   GT 2
           GT
Sbjct: 152 GT 153


>ref|XP_004145624.1| PREDICTED: WD repeat-containing protein LWD1-like [Cucumis sativus]
           gi|449501305|ref|XP_004161333.1| PREDICTED: WD
           repeat-containing protein LWD1-like [Cucumis sativus]
          Length = 346

 Score =  213 bits (542), Expect = 1e-53
 Identities = 100/122 (81%), Positives = 113/122 (92%), Gaps = 2/122 (1%)
 Frame = -1

Query: 361 AMNWSVRRDKKYRLAIASLMEQYQNRVEIVQLDDATGDIRSDPALSFEHPYPPTKTMFVP 182
           AMNWSVRRDKKYRLAIASL+EQY NRVEIVQLDD++G+IRSDP LSFEHPYPPTKT+F+P
Sbjct: 32  AMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSSGEIRSDPNLSFEHPYPPTKTIFIP 91

Query: 181 DRDCVRQDLLATSADFLRLWHIHDD--HVELKALLNGNKNSEFCGPLTSFDWNEAEPRRI 8
           D++C R DLLATS+DFLR+W I DD   VELK+LLNGNKNSEFCGPLTSFDWN+AEP+RI
Sbjct: 92  DKECQRPDLLATSSDFLRVWRISDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRI 151

Query: 7   GT 2
           GT
Sbjct: 152 GT 153


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