BLASTX nr result

ID: Dioscorea21_contig00024999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024999
         (913 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70572.1| hypothetical protein VITISV_027128 [Vitis vinifera]   157   2e-49
ref|XP_002274541.1| PREDICTED: uncharacterized protein LOC100260...   157   2e-49
ref|XP_003558536.1| PREDICTED: uncharacterized protein LOC100846...   152   3e-39
dbj|BAK00284.1| predicted protein [Hordeum vulgare subsp. vulgare]    148   1e-38
emb|CBI30070.3| unnamed protein product [Vitis vinifera]              163   5e-38

>emb|CAN70572.1| hypothetical protein VITISV_027128 [Vitis vinifera]
          Length = 749

 Score =  157 bits (398), Expect(2) = 2e-49
 Identities = 78/217 (35%), Positives = 125/217 (57%)
 Frame = +1

Query: 262 FVTSTYLIAYKPPLFGSHHFSLNSWGFEKEVRAPFKRPNWVARLYKKSLLPDMDSVVLAI 441
           F    +++ Y+ P FG HHF L      ++V+ P  +P WV  L++K  L D+D+V+LAI
Sbjct: 186 FDCDVHVVVYETPRFGVHHFLLCFGSSSEQVKNPLMKPKWVDELHQKQSLLDLDAVILAI 245

Query: 442 NCTNAAKVHSERYLSIKGPQIHFRRICMLLSMIWYIXXXXXXXXXXXXYIILQLFHRPLA 621
           N +NAAK+  +R +  K   + F  +CM  ++IW +            YIILQL     +
Sbjct: 246 NSSNAAKIFFDRNVRPKRSSVQFPIVCMFSALIWNLLAISVASFSTLFYIILQLLSHFAS 305

Query: 622 YGSQRFFFRFLKEIFRHTFKNIHIRSCQLLYWPVFLQAYGFSSSLNIAYSHKASLKKHFI 801
           YGS+ +    L + F +T+KNI IR CQ+LYWP+FL      S   + Y+ KA+L +H +
Sbjct: 306 YGSESWICIILAKAFCNTWKNIQIRCCQILYWPIFLGGDYHRSLSCVEYAEKAALHRHAM 365

Query: 802 WSNVAVDLLLGNIIGVILFANAKALSFQMMLISRNVT 912
           WS + VD+ LG++IG+ L  +A++    ++  + N+T
Sbjct: 366 WSCIVVDVFLGSLIGLALLFHAESACLCVLKFAHNIT 402



 Score = 65.5 bits (158), Expect(2) = 2e-49
 Identities = 29/70 (41%), Positives = 40/70 (57%)
 Frame = +3

Query: 69  FAENYRKSKCGCKKLDQGLELFRQSSTRCGTWIQLIPQTQRIMFKENRWAPKFHHMHISG 248
           F ENY +  CGC+KL + LE  RQ+S     W+Q I  +      E  W P+ HH+H +G
Sbjct: 123 FGENYGRWSCGCQKLGELLEQCRQASIGNSNWMQFIYDSHEYFGSEIHWIPRLHHIHWNG 182

Query: 249 HLLPICDVHV 278
            ++  CDVHV
Sbjct: 183 QIVFDCDVHV 192


>ref|XP_002274541.1| PREDICTED: uncharacterized protein LOC100260688 [Vitis vinifera]
          Length = 731

 Score =  157 bits (398), Expect(2) = 2e-49
 Identities = 78/217 (35%), Positives = 125/217 (57%)
 Frame = +1

Query: 262 FVTSTYLIAYKPPLFGSHHFSLNSWGFEKEVRAPFKRPNWVARLYKKSLLPDMDSVVLAI 441
           F    +++ Y+ P FG HHF L      ++V+ P  +P WV  L++K  L D+D+V+LAI
Sbjct: 186 FDCDVHVVVYETPRFGVHHFLLCFGSSSEQVKNPLMKPKWVDELHQKQSLLDLDAVILAI 245

Query: 442 NCTNAAKVHSERYLSIKGPQIHFRRICMLLSMIWYIXXXXXXXXXXXXYIILQLFHRPLA 621
           N +NAAK+  +R +  K   + F  +CM  ++IW +            YIILQL     +
Sbjct: 246 NSSNAAKIFFDRNVRPKRSSVQFPIVCMFSALIWNLLAISVASFSTLFYIILQLLSHFAS 305

Query: 622 YGSQRFFFRFLKEIFRHTFKNIHIRSCQLLYWPVFLQAYGFSSSLNIAYSHKASLKKHFI 801
           YGS+ +    L + F +T+KNI IR CQ+LYWP+FL      S   + Y+ KA+L +H +
Sbjct: 306 YGSESWICIILAKAFCNTWKNIRIRCCQILYWPIFLGGDYHRSLSCVEYAEKAALHRHAM 365

Query: 802 WSNVAVDLLLGNIIGVILFANAKALSFQMMLISRNVT 912
           WS + VD+ LG++IG+ L  +A++    ++  + N+T
Sbjct: 366 WSCIVVDVFLGSLIGLALLFHAESACLCVLKFAHNIT 402



 Score = 65.5 bits (158), Expect(2) = 2e-49
 Identities = 29/70 (41%), Positives = 40/70 (57%)
 Frame = +3

Query: 69  FAENYRKSKCGCKKLDQGLELFRQSSTRCGTWIQLIPQTQRIMFKENRWAPKFHHMHISG 248
           F ENY +  CGC+KL + LE  RQ+S     W+Q I  +      E  W P+ HH+H +G
Sbjct: 123 FGENYGRWSCGCQKLGELLEQCRQASIGNSNWMQFIYDSHEYFGSEIHWIPRLHHIHWNG 182

Query: 249 HLLPICDVHV 278
            ++  CDVHV
Sbjct: 183 QIVFDCDVHV 192


>ref|XP_003558536.1| PREDICTED: uncharacterized protein LOC100846144 [Brachypodium
           distachyon]
          Length = 736

 Score =  152 bits (383), Expect(2) = 3e-39
 Identities = 78/203 (38%), Positives = 123/203 (60%), Gaps = 3/203 (1%)
 Frame = +1

Query: 277 YLIAYKPPLFGSHHFSLNSWGFEKEVRAPFKRPNWVARLYKKSLLPDMDSVVLAINCTNA 456
           ++I Y  P+ G  HFSL        ++ PFK PNW+  L KK  + D+D +VLA+NC+NA
Sbjct: 206 HVILYDVPIAGRSHFSLGE-DAPHRLKTPFKVPNWINNLQKKPSVLDLDPIVLALNCSNA 264

Query: 457 AKVHSERYLSIKGPQIH--FRRIC-MLLSMIWYIXXXXXXXXXXXXYIILQLFHRPLAYG 627
           AK+      +      H  F  I   L+ ++ +             YII+QLF + L++ 
Sbjct: 265 AKLPVAWKTAANSSVAHVFFATIFDALVQVVQHFTGVFFTFVSTIVYIIIQLFQKCLSHM 324

Query: 628 SQRFFFRFLKEIFRHTFKNIHIRSCQLLYWPVFLQAYGFSSSLNIAYSHKASLKKHFIWS 807
            + F    L+++FRH+++NIHIRSCQ+LYWP+FLQ    SSS+N+ Y+H+A+++KH +WS
Sbjct: 325 PEYFM---LQKVFRHSWRNIHIRSCQILYWPIFLQDTSLSSSVNVEYAHRAAIQKHALWS 381

Query: 808 NVAVDLLLGNIIGVILFANAKAL 876
           ++ +DLL+G I+G  L  N + +
Sbjct: 382 SIIIDLLMGFILGAALLLNTEII 404



 Score = 37.0 bits (84), Expect(2) = 3e-39
 Identities = 15/68 (22%), Positives = 32/68 (47%)
 Frame = +3

Query: 75  ENYRKSKCGCKKLDQGLELFRQSSTRCGTWIQLIPQTQRIMFKENRWAPKFHHMHISGHL 254
           EN R  +C C  LD  ++  ++S  + G W+    ++++         P  HH+++    
Sbjct: 140 ENNRNQECDCSVLDGFMDTCKKSVVKGGKWVHFCCKSEKSFGCNMNQIPVLHHLYLDNQK 199

Query: 255 LPICDVHV 278
           + +  +HV
Sbjct: 200 VELNHLHV 207


>dbj|BAK00284.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 735

 Score =  148 bits (374), Expect(2) = 1e-38
 Identities = 75/207 (36%), Positives = 122/207 (58%), Gaps = 3/207 (1%)
 Frame = +1

Query: 265 VTSTYLIAYKPPLFGSHHFSLNSWGFEKEVRAPFKRPNWVARLYKKSLLPDMDSVVLAIN 444
           +   ++I Y  P+ G +HFSL        +++PFKRPNW+  L KK    D+D +VLAIN
Sbjct: 202 INHCHVILYDVPVAGRNHFSLGE-DAPYRMKSPFKRPNWINNLQKKRPFLDLDPIVLAIN 260

Query: 445 CTNAAKVHSERYLSIKGPQIHF---RRICMLLSMIWYIXXXXXXXXXXXXYIILQLFHRP 615
           C+N+A++      +      HF     I  L+ +  +             YI +QLF + 
Sbjct: 261 CSNSARLSVAWKTTNNSSAAHFLFATVIDALVQVAQHFTGIILASVSTIIYIFIQLFRKC 320

Query: 616 LAYGSQRFFFRFLKEIFRHTFKNIHIRSCQLLYWPVFLQAYGFSSSLNIAYSHKASLKKH 795
           L++ S+ F    L+++FRH++KN+H+R  Q+LYWP+FLQ    SS +N+ Y+H+A+++KH
Sbjct: 321 LSHVSEHFI---LQKVFRHSWKNMHLRCSQILYWPIFLQDTSLSSYVNVEYAHRAAIQKH 377

Query: 796 FIWSNVAVDLLLGNIIGVILFANAKAL 876
            +WSN+ +DLL+G I+G  L  N + +
Sbjct: 378 ALWSNIIMDLLMGFILGAALLLNMETI 404



 Score = 38.5 bits (88), Expect(2) = 1e-38
 Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
 Frame = +3

Query: 3   QYNESEQSSPSGKAVRASLGTAF---AENYRKSKCGCKKLDQGLELFRQSSTRCGTWIQL 173
           Q   ++ +  S  A+  SLG+     +EN  K +C C  LD  L+  ++S  + G W+  
Sbjct: 113 QAEHADTNQDSSIALGGSLGSEDQDQSENNGKWECDCSVLDGFLDKCKKSVVKRGDWVHF 172

Query: 174 IPQTQRIMFKENRWAPKFHHMHISGHLLPICDVHV 278
             + ++ +       P  HH+++    + I   HV
Sbjct: 173 CCKPEKSLKSNLNQIPVLHHLYLDDQKVEINHCHV 207


>emb|CBI30070.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  163 bits (413), Expect = 5e-38
 Identities = 84/238 (35%), Positives = 133/238 (55%)
 Frame = +1

Query: 199 SRKTDGPQSFTTCI*VDICCPFVTSTYLIAYKPPLFGSHHFSLNSWGFEKEVRAPFKRPN 378
           S+   G Q    C   ++    V  TY++ Y+ P FG HHF L      ++V+ P  +P 
Sbjct: 50  SKNESGLQGILHCTNENMPFLIVMFTYVVVYETPRFGVHHFLLCFGSSSEQVKNPLMKPK 109

Query: 379 WVARLYKKSLLPDMDSVVLAINCTNAAKVHSERYLSIKGPQIHFRRICMLLSMIWYIXXX 558
           WV  L++K  L D+D+V+LAIN +NAAK+  +R +  K   + F  +CM  ++IW +   
Sbjct: 110 WVDELHQKQSLLDLDAVILAINSSNAAKIFFDRNVRPKRSSVQFPIVCMFSALIWNLLAI 169

Query: 559 XXXXXXXXXYIILQLFHRPLAYGSQRFFFRFLKEIFRHTFKNIHIRSCQLLYWPVFLQAY 738
                    YIILQL     +YGS+ +    L + F +T+KNI IR CQ+LYWP+FL   
Sbjct: 170 SVASFSTLFYIILQLLSHFASYGSESWICIILAKAFCNTWKNIRIRCCQILYWPIFLGGD 229

Query: 739 GFSSSLNIAYSHKASLKKHFIWSNVAVDLLLGNIIGVILFANAKALSFQMMLISRNVT 912
              S   + Y+ KA+L +H +WS + VD+ LG++IG+ L  +A++    ++  + N+T
Sbjct: 230 YHRSLSCVEYAEKAALHRHAMWSCIVVDVFLGSLIGLALLFHAESACLCVLKFAHNIT 287


Top