BLASTX nr result

ID: Dioscorea21_contig00024990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024990
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170847.1| PREDICTED: pre-mRNA-processing factor 39-lik...   102   3e-20
ref|XP_004147431.1| PREDICTED: pre-mRNA-processing factor 39-lik...   102   3e-20
tpg|DAA49158.1| TPA: hypothetical protein ZEAMMB73_697187 [Zea m...   102   3e-20
emb|CBI30815.3| unnamed protein product [Vitis vinifera]              102   3e-20
ref|XP_002865195.1| binding protein [Arabidopsis lyrata subsp. l...   100   2e-19

>ref|XP_004170847.1| PREDICTED: pre-mRNA-processing factor 39-like [Cucumis sativus]
          Length = 421

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/112 (46%), Positives = 73/112 (65%)
 Frame = -3

Query: 336 MGNSEEEADEMLQDAALGTQSPQSDLFETKLREMVESNLIDFDTWIMLITEIENMEPNSI 157
           + NS  +A  +  D+A+G       L E+KL E+V    +DF+ W  LI+EIE   P+ I
Sbjct: 8   LNNSGTKAKPIESDSAVG-------LDESKLYEVVPKCGLDFEEWTSLISEIERKYPDVI 60

Query: 156 KRITQVYDHFLSEFPLCYAYWSKYASHKARLCTLQDVQDIYERAAGALAYSV 1
           ++I+ VYD FLSEFPLC+ YW KYASHK RLC++  V D++E+A  +  YSV
Sbjct: 61  EKISLVYDSFLSEFPLCHGYWRKYASHKTRLCSVDRVVDVFEQAVQSATYSV 112


>ref|XP_004147431.1| PREDICTED: pre-mRNA-processing factor 39-like [Cucumis sativus]
          Length = 901

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/112 (46%), Positives = 73/112 (65%)
 Frame = -3

Query: 336 MGNSEEEADEMLQDAALGTQSPQSDLFETKLREMVESNLIDFDTWIMLITEIENMEPNSI 157
           + NS  +A  +  D+A+G       L E+KL E+V    +DF+ W  LI+EIE   P+ I
Sbjct: 8   LNNSGTKAKPIESDSAVG-------LDESKLYEVVPKCGLDFEEWTSLISEIERKYPDVI 60

Query: 156 KRITQVYDHFLSEFPLCYAYWSKYASHKARLCTLQDVQDIYERAAGALAYSV 1
           ++I+ VYD FLSEFPLC+ YW KYASHK RLC++  V D++E+A  +  YSV
Sbjct: 61  EKISLVYDSFLSEFPLCHGYWRKYASHKTRLCSVDRVVDVFEQAVQSATYSV 112


>tpg|DAA49158.1| TPA: hypothetical protein ZEAMMB73_697187 [Zea mays]
          Length = 553

 Score =  102 bits (254), Expect = 3e-20
 Identities = 53/113 (46%), Positives = 71/113 (62%), Gaps = 5/113 (4%)
 Frame = -3

Query: 324 EEEADEM-LQDAALGTQSPQS----DLFETKLREMVESNLIDFDTWIMLITEIENMEPNS 160
           E EAD M L   A   + P S    D F+T+++ + ESN  DFD W+ LI   E    + 
Sbjct: 12  EPEADAMALASEAAAPELPSSHSQLDFFKTRVQLLCESNTRDFDAWVSLINAAEGTSADD 71

Query: 159 IKRITQVYDHFLSEFPLCYAYWSKYASHKARLCTLQDVQDIYERAAGALAYSV 1
           I+ ++ VY +FL EFPLCY YW KYA+HKARLCT + V D+YE+A  A+ +SV
Sbjct: 72  IEVMSLVYHNFLLEFPLCYGYWIKYAAHKARLCTTRYVMDVYEQAVHAVPHSV 124


>emb|CBI30815.3| unnamed protein product [Vitis vinifera]
          Length = 1195

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/83 (56%), Positives = 56/83 (67%)
 Frame = -3

Query: 249 KLREMVESNLIDFDTWIMLITEIENMEPNSIKRITQVYDHFLSEFPLCYAYWSKYASHKA 70
           KL E V   L+ FD W  LI+ IE   P+ IK+I  VYD FLSEFPLCY YW KYA HK+
Sbjct: 13  KLPEFVAKGLLGFDAWTSLISNIEKTYPDDIKKICLVYDSFLSEFPLCYGYWRKYADHKS 72

Query: 69  RLCTLQDVQDIYERAAGALAYSV 1
           RLCT+  V ++YERA  +  YSV
Sbjct: 73  RLCTVDKVIEVYERAVQSATYSV 95


>ref|XP_002865195.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311030|gb|EFH41454.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1035

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
 Frame = -3

Query: 276 SPQSD-----LFETKLREMVESNLIDFDTWIMLITEIENMEPNSIKRITQVYDHFLSEFP 112
           SPQ D     L   +L+E   S  +DFD WI+LI+EIE   P+ I+++  VYD FL EFP
Sbjct: 19  SPQLDGSSDFLDNDRLQETFSSGALDFDEWILLISEIETSFPDDIEKLCLVYDAFLLEFP 78

Query: 111 LCYAYWSKYASHKARLCTLQDVQDIYERAAGALAYSV 1
           LC+ YW KYA HK +LCT +D  +++ERA  A  YSV
Sbjct: 79  LCHGYWRKYAYHKIKLCTSEDALEVFERAVQAATYSV 115


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