BLASTX nr result

ID: Dioscorea21_contig00024989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024989
         (830 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285837.1| PREDICTED: glycine-rich protein 2b-like [Vit...   125   9e-27
emb|CAN68380.1| hypothetical protein VITISV_018906 [Vitis vinifera]   125   9e-27
ref|XP_002513770.1| cold shock protein, putative [Ricinus commun...   115   1e-23
ref|XP_002301004.1| predicted protein [Populus trichocarpa] gi|2...   112   1e-22
ref|XP_002307424.1| predicted protein [Populus trichocarpa] gi|2...   112   1e-22

>ref|XP_002285837.1| PREDICTED: glycine-rich protein 2b-like [Vitis vinifera]
          Length = 228

 Score =  125 bits (315), Expect = 9e-27
 Identities = 56/71 (78%), Positives = 68/71 (95%)
 Frame = +1

Query: 496 MAQERRRGGTVKWFSGQKGFGFISPNEGGEDLFVHQTSIRSDGFRTLSDGDTVEFSVEHG 675
           MA+ +R  GTVKWFSGQKGFGFI+P++GGEDLFVHQTSIRSDGFRTLS+G+TVEF+V+HG
Sbjct: 1   MAESKRSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHG 60

Query: 676 DDGRTRAVDVT 708
           +DGRT+AV+VT
Sbjct: 61  EDGRTKAVEVT 71


>emb|CAN68380.1| hypothetical protein VITISV_018906 [Vitis vinifera]
          Length = 189

 Score =  125 bits (315), Expect = 9e-27
 Identities = 56/71 (78%), Positives = 68/71 (95%)
 Frame = +1

Query: 496 MAQERRRGGTVKWFSGQKGFGFISPNEGGEDLFVHQTSIRSDGFRTLSDGDTVEFSVEHG 675
           MA+ +R  GTVKWFSGQKGFGFI+P++GGEDLFVHQTSIRSDGFRTLS+G+TVEF+V+HG
Sbjct: 1   MAESKRSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHG 60

Query: 676 DDGRTRAVDVT 708
           +DGRT+AV+VT
Sbjct: 61  EDGRTKAVEVT 71


>ref|XP_002513770.1| cold shock protein, putative [Ricinus communis]
           gi|223546856|gb|EEF48353.1| cold shock protein, putative
           [Ricinus communis]
          Length = 184

 Score =  115 bits (288), Expect = 1e-23
 Identities = 53/70 (75%), Positives = 63/70 (90%)
 Frame = +1

Query: 496 MAQERRRGGTVKWFSGQKGFGFISPNEGGEDLFVHQTSIRSDGFRTLSDGDTVEFSVEHG 675
           MA+ +R  GTVKWFS QKGFGFI+P++GGEDLFVHQTSI+SDGFRTLS+G  VEFSV+ G
Sbjct: 1   MAENKRSIGTVKWFSAQKGFGFIAPDDGGEDLFVHQTSIQSDGFRTLSEGQPVEFSVDFG 60

Query: 676 DDGRTRAVDV 705
           +DGRT+AVDV
Sbjct: 61  EDGRTKAVDV 70


>ref|XP_002301004.1| predicted protein [Populus trichocarpa] gi|222842730|gb|EEE80277.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  112 bits (280), Expect = 1e-22
 Identities = 52/70 (74%), Positives = 60/70 (85%)
 Frame = +1

Query: 496 MAQERRRGGTVKWFSGQKGFGFISPNEGGEDLFVHQTSIRSDGFRTLSDGDTVEFSVEHG 675
           MA+ +R  GTVKWFS QKGFGFI+P++GGEDLFVHQTSI+SDGFRTLSDG  VEFSV  G
Sbjct: 1   MAETKRSTGTVKWFSAQKGFGFIAPDDGGEDLFVHQTSIQSDGFRTLSDGQPVEFSVGSG 60

Query: 676 DDGRTRAVDV 705
           +DGR +A DV
Sbjct: 61  EDGRAKAADV 70


>ref|XP_002307424.1| predicted protein [Populus trichocarpa] gi|222856873|gb|EEE94420.1|
           predicted protein [Populus trichocarpa]
          Length = 64

 Score =  112 bits (279), Expect = 1e-22
 Identities = 51/62 (82%), Positives = 58/62 (93%)
 Frame = +1

Query: 520 GTVKWFSGQKGFGFISPNEGGEDLFVHQTSIRSDGFRTLSDGDTVEFSVEHGDDGRTRAV 699
           GTVKWFS QKGFGFI+P++GGEDLFVHQTSI+SDGFRTLSDG  VEFSV+ G+DGRT+AV
Sbjct: 1   GTVKWFSAQKGFGFIAPDDGGEDLFVHQTSIQSDGFRTLSDGQPVEFSVDSGEDGRTKAV 60

Query: 700 DV 705
           DV
Sbjct: 61  DV 62


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