BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024983
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX95129.1| retrotransposon protein, putative, unclassified [...   125   3e-27
gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japo...   125   3e-27
gb|ABA91837.2| retrotransposon protein, putative, unclassified [...   125   3e-27
gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]     119   2e-25
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   114   7e-24

>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|62733115|gb|AAX95232.1|
            retrotransposon protein, putative, unclassified [Oryza
            sativa Japonica Group]
          Length = 1324

 Score =  125 bits (315), Expect = 3e-27
 Identities = 71/180 (39%), Positives = 99/180 (55%), Gaps = 1/180 (0%)
 Frame = +3

Query: 3    QKGDRNSSFFHNTAKIRGHFNRISCLEDNEGHVLDGHNQIEEAFLNFYSNLWHEPVPNSF 182
            +KGDRN+ FFH  A  R   N+I  L  ++G V+            FY  L+   VP + 
Sbjct: 802  EKGDRNTKFFHECASERKKRNKIKKLRRDDGEVITDEAGSLSLISEFYKQLFTAGVPLNL 861

Query: 183  TNLLQALPHDLNTISSSDCNSLAKDITKDEILASLTSLPDGKSP-GLDGFNSEFYKFFWD 359
              LLQ +P     ++S+  + L K +T +EI  +L S+ D K+P G DG  + FYK FW+
Sbjct: 862  DELLQNVP---KRVTSTMNDELMKGVTTEEIKKALDSIGDLKAPPGSDGMPALFYKQFWE 918

Query: 360  DLGDHLFEAINHFMLTASMPRSWGKTFVTLIPKKEHPRVVVDFRPISLCNVCYKIVTKIL 539
             +GD +   +  F+    MP SW  T V LIPK  +P  + D RPISLCNV YKI +K+L
Sbjct: 919  CVGDDIVHEVKDFLGGGEMPDSWNDTVVVLIPKVPNPERIKDLRPISLCNVVYKIASKVL 978


>gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japonica Group]
          Length = 825

 Score =  125 bits (315), Expect = 3e-27
 Identities = 71/180 (39%), Positives = 99/180 (55%), Gaps = 1/180 (0%)
 Frame = +3

Query: 3   QKGDRNSSFFHNTAKIRGHFNRISCLEDNEGHVLDGHNQIEEAFLNFYSNLWHEPVPNSF 182
           +KGDRN+ FFH  A  R   N+I  L  ++G V+            FY  L+   VP + 
Sbjct: 303 EKGDRNTKFFHECASERKKRNKIKKLRRDDGEVITDEAGSLSLISEFYKQLFTAGVPLNL 362

Query: 183 TNLLQALPHDLNTISSSDCNSLAKDITKDEILASLTSLPDGKSP-GLDGFNSEFYKFFWD 359
             LLQ +P     ++S+  + L K +T +EI  +L S+ D K+P G DG  + FYK FW+
Sbjct: 363 DELLQNVP---KRVTSTMNDELMKGVTTEEIKKALDSIGDLKAPPGSDGMPALFYKQFWE 419

Query: 360 DLGDHLFEAINHFMLTASMPRSWGKTFVTLIPKKEHPRVVVDFRPISLCNVCYKIVTKIL 539
            +GD +   +  F+    MP SW  T V LIPK  +P  + D RPISLCNV YKI +K+L
Sbjct: 420 CVGDDIVHEVKDFLGGGEMPDSWNDTVVVLIPKVPNPERIKDLRPISLCNVVYKIASKVL 479


>gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1301

 Score =  125 bits (315), Expect = 3e-27
 Identities = 71/180 (39%), Positives = 99/180 (55%), Gaps = 1/180 (0%)
 Frame = +3

Query: 3    QKGDRNSSFFHNTAKIRGHFNRISCLEDNEGHVLDGHNQIEEAFLNFYSNLWHEPVPNSF 182
            +KGDRN+ FFH  A  R   N+I  L  ++G V+            FY  L+   VP + 
Sbjct: 779  EKGDRNTKFFHECASERKKRNKIKKLRRDDGEVITDEAGSLSLISEFYKQLFTAGVPLNL 838

Query: 183  TNLLQALPHDLNTISSSDCNSLAKDITKDEILASLTSLPDGKSP-GLDGFNSEFYKFFWD 359
              LLQ +P     ++S+  + L K +T +EI  +L S+ D K+P G DG  + FYK FW+
Sbjct: 839  DELLQNVP---KRVTSTMNDELMKGVTTEEIKKALDSIGDLKAPPGSDGMPALFYKQFWE 895

Query: 360  DLGDHLFEAINHFMLTASMPRSWGKTFVTLIPKKEHPRVVVDFRPISLCNVCYKIVTKIL 539
             +GD +   +  F+    MP SW  T V LIPK  +P  + D RPISLCNV YKI +K+L
Sbjct: 896  CVGDDIVHEVKDFLGGGEMPDSWNDTVVVLIPKVPNPERIKDLRPISLCNVVYKIASKVL 955


>gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]
          Length = 381

 Score =  119 bits (299), Expect = 2e-25
 Identities = 62/178 (34%), Positives = 104/178 (58%), Gaps = 1/178 (0%)
 Frame = +3

Query: 9   GDRNSSFFHNTAKIRGHFNRISCLEDNEGHVLDGHNQIEEAFLNFYSNLWHEPVPNSFTN 188
           GDRN  FFH + K R   N+I  +++N G  + G+ +I +  L ++S ++   +  +  +
Sbjct: 150 GDRNIRFFHASTKNRRAKNKILSIQNNLGEEVFGNKEISKEALRYFSEIFTSSLQGNIQD 209

Query: 189 LLQALPHDLNTISSSDCNS-LAKDITKDEILASLTSLPDGKSPGLDGFNSEFYKFFWDDL 365
            L     ++N + S +CN+ L++D+T +E+  S+ S+   ++PG DG  + FY+ +WD +
Sbjct: 210 SLG----NINRVVSDECNAYLSRDVTAEEVRISVFSIGATRAPGPDGLTASFYQTYWDIV 265

Query: 366 GDHLFEAINHFMLTASMPRSWGKTFVTLIPKKEHPRVVVDFRPISLCNVCYKIVTKIL 539
           G  + E + HF  T         T + LIPK  +P  + DFRPI+LCNV YKI++KIL
Sbjct: 266 GPAVVEEVRHFFNTGEFYSDLNHTNLCLIPKITNPITMKDFRPIALCNVMYKIISKIL 323


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  114 bits (286), Expect = 7e-24
 Identities = 59/178 (33%), Positives = 96/178 (53%)
 Frame = +3

Query: 6    KGDRNSSFFHNTAKIRGHFNRISCLEDNEGHVLDGHNQIEEAFLNFYSNLWHEPVPNSFT 185
            KGDRN+SFFH +   R   NRI+ L   +G  ++         + F+  L+      +  
Sbjct: 603  KGDRNTSFFHASCSERRRRNRINKLRREDGSWVEREEDKRAMIIEFFKQLFTSNGGQNSQ 662

Query: 186  NLLQALPHDLNTISSSDCNSLAKDITKDEILASLTSLPDGKSPGLDGFNSEFYKFFWDDL 365
             LL  +      +S +   SL  + T++E+  +L ++ D K+PG DG  + FYK  WD +
Sbjct: 663  KLLDVVDRK---VSGAMNESLRAEFTREEVKEALDAIGDLKAPGPDGMPAGFYKACWDVV 719

Query: 366  GDHLFEAINHFMLTASMPRSWGKTFVTLIPKKEHPRVVVDFRPISLCNVCYKIVTKIL 539
            G+ + + +   +   ++P  W    + LIPK + P ++ D RPISLCNVCYK+V+K+L
Sbjct: 720  GEKVTDEVLEVLRGGAIPEGWNDITIVLIPKVKKPELIKDLRPISLCNVCYKLVSKVL 777