BLASTX nr result

ID: Dioscorea21_contig00024962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024962
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003561159.1| PREDICTED: uncharacterized membrane protein ...    77   2e-14
dbj|BAJ86926.1| predicted protein [Hordeum vulgare subsp. vulgare]     76   4e-14
dbj|BAJ85035.1| predicted protein [Hordeum vulgare subsp. vulgare]     76   4e-14
gb|AFW75285.1| hypothetical protein ZEAMMB73_964126 [Zea mays]         80   1e-13
ref|XP_002437714.1| hypothetical protein SORBIDRAFT_10g001250 [S...    80   1e-13

>ref|XP_003561159.1| PREDICTED: uncharacterized membrane protein At1g75140-like
           [Brachypodium distachyon]
          Length = 840

 Score = 77.0 bits (188), Expect(2) = 2e-14
 Identities = 38/63 (60%), Positives = 46/63 (73%)
 Frame = +2

Query: 8   LNSSPIFDLELH*AGQALYVLASNAEGRVHVFIENSTFYGTAIASTQPLAFAKHRLLFLT 187
           L+ SP+  LE H AG++ YVL+ +A  R+ VF EN T YGTAIAS+ PLAF K RLLFLT
Sbjct: 428 LDGSPVLHLEAHHAGRSRYVLSCDAGRRIRVFTENGTLYGTAIASSTPLAFVKQRLLFLT 487

Query: 188 ETG 196
           E G
Sbjct: 488 EAG 490



 Score = 26.9 bits (58), Expect(2) = 2e-14
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = +1

Query: 205 LDLWSMVVREVDCEGL 252
           LDL SM VRE  CEGL
Sbjct: 494 LDLGSMTVRETPCEGL 509


>dbj|BAJ86926.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 670

 Score = 75.9 bits (185), Expect(2) = 4e-14
 Identities = 37/63 (58%), Positives = 46/63 (73%)
 Frame = +2

Query: 8   LNSSPIFDLELH*AGQALYVLASNAEGRVHVFIENSTFYGTAIASTQPLAFAKHRLLFLT 187
           L+ +P+  LE H AG++ YVL+ +A  R+ VF EN T YGTAIAS+ PLAF K RLLFLT
Sbjct: 256 LDGAPVLHLEAHHAGRSRYVLSCDAGRRIRVFTENGTLYGTAIASSTPLAFVKQRLLFLT 315

Query: 188 ETG 196
           E G
Sbjct: 316 EAG 318



 Score = 26.6 bits (57), Expect(2) = 4e-14
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = +1

Query: 205 LDLWSMVVREVDCEGL 252
           LDL SM VRE  CEGL
Sbjct: 322 LDLRSMTVRETPCEGL 337


>dbj|BAJ85035.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 648

 Score = 75.9 bits (185), Expect(2) = 4e-14
 Identities = 37/63 (58%), Positives = 46/63 (73%)
 Frame = +2

Query: 8   LNSSPIFDLELH*AGQALYVLASNAEGRVHVFIENSTFYGTAIASTQPLAFAKHRLLFLT 187
           L+ +P+  LE H AG++ YVL+ +A  R+ VF EN T YGTAIAS+ PLAF K RLLFLT
Sbjct: 234 LDGAPVLHLEAHHAGRSRYVLSCDAGRRIRVFTENGTLYGTAIASSTPLAFVKQRLLFLT 293

Query: 188 ETG 196
           E G
Sbjct: 294 EAG 296



 Score = 26.6 bits (57), Expect(2) = 4e-14
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = +1

Query: 205 LDLWSMVVREVDCEGL 252
           LDL SM VRE  CEGL
Sbjct: 300 LDLRSMTVRETPCEGL 315


>gb|AFW75285.1| hypothetical protein ZEAMMB73_964126 [Zea mays]
          Length = 633

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/78 (55%), Positives = 54/78 (69%)
 Frame = +2

Query: 8   LNSSPIFDLELH*AGQALYVLASNAEGRVHVFIENSTFYGTAIASTQPLAFAKHRLLFLT 187
           L+++P+  LE H AG+A YVL+ +A GR+ VF EN T YGTAIAS+ PLAF K RLLFLT
Sbjct: 219 LDAAPVVHLEAHHAGRARYVLSCDAGGRIRVFTENGTLYGTAIASSTPLAFVKQRLLFLT 278

Query: 188 ETGTGFSISGQWWSARST 241
           E G   S+  +  S R T
Sbjct: 279 EAGAA-SLDLRSMSVRET 295


>ref|XP_002437714.1| hypothetical protein SORBIDRAFT_10g001250 [Sorghum bicolor]
           gi|241915937|gb|EER89081.1| hypothetical protein
           SORBIDRAFT_10g001250 [Sorghum bicolor]
          Length = 642

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/78 (55%), Positives = 54/78 (69%)
 Frame = +2

Query: 8   LNSSPIFDLELH*AGQALYVLASNAEGRVHVFIENSTFYGTAIASTQPLAFAKHRLLFLT 187
           L+++P+  LE H AG+A YVL+ +A GR+ VF EN T YGTAIAS+ PLAF K RLLFLT
Sbjct: 229 LDAAPVVHLEAHHAGRARYVLSCDAGGRIRVFTENGTLYGTAIASSTPLAFVKQRLLFLT 288

Query: 188 ETGTGFSISGQWWSARST 241
           E G   S+  +  S R T
Sbjct: 289 EAGAA-SLDLRSMSVRET 305


Top