BLASTX nr result

ID: Dioscorea21_contig00024929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024929
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE75637.1| unknown [Picea sitchensis]                             214   8e-54
ref|XP_003562777.1| PREDICTED: RING finger protein 170-like [Bra...   204   8e-51
ref|XP_001769535.1| predicted protein [Physcomitrella patens sub...   201   5e-50
ref|XP_002325966.1| predicted protein [Populus trichocarpa] gi|2...   198   3e-49
ref|XP_002327279.1| predicted protein [Populus trichocarpa] gi|2...   196   1e-48

>gb|ADE75637.1| unknown [Picea sitchensis]
          Length = 266

 Score =  214 bits (544), Expect = 8e-54
 Identities = 93/129 (72%), Positives = 107/129 (82%)
 Frame = +1

Query: 25  MESPPVNDVCSVCHDDFNLPCQANCSHWFCGQCILRVWHHASALQPCKCPICRRVITLLI 204
           M+SPP ND CS+CHD+F+LPCQANC+HWFCG CILRVWHH+SALQPCKCPICRR I LLI
Sbjct: 81  MDSPPENDCCSICHDNFDLPCQANCAHWFCGDCILRVWHHSSALQPCKCPICRRPINLLI 140

Query: 205 PSETAQHQRHDPEASRVLMQIENYNRVFGGGSRSFVQRLRDVPFFLRRLMRELMDPQRSL 384
           P E+A  +R  PE   VL  IE YNR+FGGGS  F QRLRD P  LRRL+RELMDPQR+L
Sbjct: 141 PCESATRRRDGPEVDSVLQNIEKYNRIFGGGSVGFFQRLRDTPLLLRRLLRELMDPQRAL 200

Query: 385 PLVFKARMI 411
           PLVF+AR++
Sbjct: 201 PLVFRARIV 209


>ref|XP_003562777.1| PREDICTED: RING finger protein 170-like [Brachypodium distachyon]
          Length = 197

 Score =  204 bits (518), Expect = 8e-51
 Identities = 85/126 (67%), Positives = 106/126 (84%)
 Frame = +1

Query: 34  PPVNDVCSVCHDDFNLPCQANCSHWFCGQCILRVWHHASALQPCKCPICRRVITLLIPSE 213
           PP +DVCSVCHD F +PCQANCSHWFCG+CI+RVW+H +A+QPCKCPICRR+I LL+P+ 
Sbjct: 16  PPEDDVCSVCHDRFRIPCQANCSHWFCGECIIRVWNHGAAVQPCKCPICRRLINLLVPAN 75

Query: 214 TAQHQRHDPEASRVLMQIENYNRVFGGGSRSFVQRLRDVPFFLRRLMRELMDPQRSLPLV 393
             + Q  DP+  RVL +I++YN +FGG  RS  QRL+D+PFF+RRL RELMDPQR+LPLV
Sbjct: 76  ITEDQNDDPQLQRVLGEIQHYNHIFGGAPRSLTQRLQDLPFFMRRLFRELMDPQRTLPLV 135

Query: 394 FKARMI 411
           F+ARMI
Sbjct: 136 FRARMI 141


>ref|XP_001769535.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162679246|gb|EDQ65696.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 187

 Score =  201 bits (511), Expect = 5e-50
 Identities = 83/130 (63%), Positives = 106/130 (81%)
 Frame = +1

Query: 25  MESPPVNDVCSVCHDDFNLPCQANCSHWFCGQCILRVWHHASALQPCKCPICRRVITLLI 204
           M+SPP ND CSVCHD F +PCQANC+HWFCG+CILRVW H+S LQPCKCPICRR ITLLI
Sbjct: 1   MDSPPDNDCCSVCHDSFTMPCQANCAHWFCGECILRVWQHSSVLQPCKCPICRRAITLLI 60

Query: 205 PSETAQHQRHDPEASRVLMQIENYNRVFGGGSRSFVQRLRDVPFFLRRLMRELMDPQRSL 384
           P+  ++ Q+ DPE  RV+  +  YNR+FGGG  SF+QR+RD+P  L+R++ ELMDPQR++
Sbjct: 61  PTNVSEAQQQDPEVERVIRDLAKYNRIFGGGPVSFMQRVRDMPLLLQRMVGELMDPQRAI 120

Query: 385 PLVFKARMIF 414
           PLV + R++F
Sbjct: 121 PLVHRTRILF 130


>ref|XP_002325966.1| predicted protein [Populus trichocarpa] gi|222862841|gb|EEF00348.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  198 bits (504), Expect = 3e-49
 Identities = 82/131 (62%), Positives = 103/131 (78%)
 Frame = +1

Query: 25  MESPPVNDVCSVCHDDFNLPCQANCSHWFCGQCILRVWHHASALQPCKCPICRRVITLLI 204
           M+ PPVND CS+CH  FN+ CQANCSHWFCG CI+ VWHH S LQPCKCP+CRR ITLL+
Sbjct: 1   MDGPPVNDFCSICHGHFNIACQANCSHWFCGDCIMLVWHHGSVLQPCKCPLCRRQITLLV 60

Query: 205 PSETAQHQRHDPEASRVLMQIENYNRVFGGGSRSFVQRLRDVPFFLRRLMRELMDPQRSL 384
           P E +  +R DP+ + VL +IE YN +FGG +   +QR++D+PF LRRL+RE+MDPQRSL
Sbjct: 61  PGEASLRERSDPDVAEVLGKIERYNHLFGGNTSGLIQRMQDLPFLLRRLLREIMDPQRSL 120

Query: 385 PLVFKARMIFA 417
           PLV +AR+  A
Sbjct: 121 PLVIRARVYIA 131


>ref|XP_002327279.1| predicted protein [Populus trichocarpa] gi|222835649|gb|EEE74084.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  196 bits (499), Expect = 1e-48
 Identities = 82/131 (62%), Positives = 103/131 (78%)
 Frame = +1

Query: 25  MESPPVNDVCSVCHDDFNLPCQANCSHWFCGQCILRVWHHASALQPCKCPICRRVITLLI 204
           M+ PP ND C++CH  FN+ CQANCSHWFCG CI+ VWHH S LQPCKCP+CRR ITLL+
Sbjct: 1   MDGPPGNDCCAICHGHFNIACQANCSHWFCGDCIMLVWHHGSVLQPCKCPLCRRQITLLV 60

Query: 205 PSETAQHQRHDPEASRVLMQIENYNRVFGGGSRSFVQRLRDVPFFLRRLMRELMDPQRSL 384
           P E +  +R+DP  + VL +IE YN +FGG + S VQR++D+PF LRRL+RE+MDPQRSL
Sbjct: 61  PGEASLRERNDPHVAEVLGKIERYNHLFGGNTSSLVQRMQDLPFLLRRLLREIMDPQRSL 120

Query: 385 PLVFKARMIFA 417
           P+V KAR+  A
Sbjct: 121 PVVIKARVYIA 131


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