BLASTX nr result

ID: Dioscorea21_contig00024922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024922
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ06779.1| hypothetical protein OsI_29023 [Oryza sativa Indi...   119   3e-25
dbj|BAD03491.1| hypothetical protein [Oryza sativa Japonica Grou...   117   7e-25
ref|NP_001061658.2| Os08g0369700 [Oryza sativa Japonica Group] g...   117   7e-25
ref|XP_003572142.1| PREDICTED: iron-sulfur assembly protein IscA...   116   2e-24
emb|CAB85510.1| putative protein [Arabidopsis thaliana]               115   3e-24

>gb|EAZ06779.1| hypothetical protein OsI_29023 [Oryza sativa Indica Group]
          Length = 166

 Score =  119 bits (298), Expect = 3e-25
 Identities = 63/118 (53%), Positives = 78/118 (66%), Gaps = 12/118 (10%)
 Frame = +1

Query: 181 RSMLQRIVPFVNARIQWSHRLLXXXXXXXXXXX----------PDGEEAVHMTDNCIKRL 330
           R +L+R+   +  R++ SHRLL                     P   + VHMTD CI+RL
Sbjct: 9   RPLLRRVAALLGGRVRASHRLLSSSPSSSSAAAAATERASPPSPADPDTVHMTDGCIRRL 68

Query: 331 KELHAKG--DYGKMLRLSVETGGCSGFQYAFLLDNEKNSDDRVFEKDGVELVVDNISY 498
           KELHAK     GKMLRLSVE GGCSGFQY+F LD++KNSDDR+FEKDGV+LVVD++SY
Sbjct: 69  KELHAKEPPSEGKMLRLSVEAGGCSGFQYSFSLDDKKNSDDRIFEKDGVKLVVDDVSY 126


>dbj|BAD03491.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|38637278|dbj|BAD03542.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 177

 Score =  117 bits (294), Expect = 7e-25
 Identities = 62/118 (52%), Positives = 78/118 (66%), Gaps = 12/118 (10%)
 Frame = +1

Query: 181 RSMLQRIVPFVNARIQWSHRLLXXXXXXXXXXX----------PDGEEAVHMTDNCIKRL 330
           R +L+R+   +  R++ SHRLL                     P   + VHMTD CI+RL
Sbjct: 9   RPLLRRVAALLGGRVRASHRLLSSSPSSSSAAAAATERASPPSPADPDTVHMTDGCIRRL 68

Query: 331 KELHAKG--DYGKMLRLSVETGGCSGFQYAFLLDNEKNSDDRVFEKDGVELVVDNISY 498
           KELHAK     GKMLRLSVE GGCSGFQY+F LD++KNSDDR+FEK+GV+LVVD++SY
Sbjct: 69  KELHAKEPPSEGKMLRLSVEAGGCSGFQYSFSLDDKKNSDDRIFEKEGVKLVVDDVSY 126


>ref|NP_001061658.2| Os08g0369700 [Oryza sativa Japonica Group]
           gi|125603202|gb|EAZ42527.1| hypothetical protein
           OsJ_27093 [Oryza sativa Japonica Group]
           gi|255678398|dbj|BAF23572.2| Os08g0369700 [Oryza sativa
           Japonica Group]
          Length = 166

 Score =  117 bits (294), Expect = 7e-25
 Identities = 62/118 (52%), Positives = 78/118 (66%), Gaps = 12/118 (10%)
 Frame = +1

Query: 181 RSMLQRIVPFVNARIQWSHRLLXXXXXXXXXXX----------PDGEEAVHMTDNCIKRL 330
           R +L+R+   +  R++ SHRLL                     P   + VHMTD CI+RL
Sbjct: 9   RPLLRRVAALLGGRVRASHRLLSSSPSSSSAAAAATERASPPSPADPDTVHMTDGCIRRL 68

Query: 331 KELHAKG--DYGKMLRLSVETGGCSGFQYAFLLDNEKNSDDRVFEKDGVELVVDNISY 498
           KELHAK     GKMLRLSVE GGCSGFQY+F LD++KNSDDR+FEK+GV+LVVD++SY
Sbjct: 69  KELHAKEPPSEGKMLRLSVEAGGCSGFQYSFSLDDKKNSDDRIFEKEGVKLVVDDVSY 126


>ref|XP_003572142.1| PREDICTED: iron-sulfur assembly protein IscA-like 2,
           mitochondrial-like [Brachypodium distachyon]
          Length = 231

 Score =  116 bits (290), Expect = 2e-24
 Identities = 62/110 (56%), Positives = 77/110 (70%), Gaps = 4/110 (3%)
 Frame = +1

Query: 181 RSMLQRIVPFVNARIQWSHRLLXXXXXXXXXXX--PDGEEAVHMTDNCIKRLKELHAK-- 348
           R  L+ +   +N R++ +HRLL             P   EAV MT+ C++RLKELHAK  
Sbjct: 82  RPPLRHLAALLNGRLRANHRLLASSTAERASASASPAEPEAVLMTEGCVRRLKELHAKEP 141

Query: 349 GDYGKMLRLSVETGGCSGFQYAFLLDNEKNSDDRVFEKDGVELVVDNISY 498
              GKMLR+SVE GGCSGFQY+F LDN++NSDDRVFEKDGV+LVVD+ISY
Sbjct: 142 SSEGKMLRVSVEAGGCSGFQYSFSLDNKENSDDRVFEKDGVKLVVDDISY 191


>emb|CAB85510.1| putative protein [Arabidopsis thaliana]
          Length = 757

 Score =  115 bits (289), Expect = 3e-24
 Identities = 59/119 (49%), Positives = 76/119 (63%), Gaps = 9/119 (7%)
 Frame = +1

Query: 169 KMMPRSMLQRIVPFVNARIQWSHRLLXXXXXXXXXXXPDGE---------EAVHMTDNCI 321
           K M RS+++R+ P++  RI+ +HRLL                        + VH++DNCI
Sbjct: 598 KTMSRSLVKRVAPYLAGRIRENHRLLNFSSASAIKEASSSSSSQPESSSNDVVHLSDNCI 657

Query: 322 KRLKELHAKGDYGKMLRLSVETGGCSGFQYAFLLDNEKNSDDRVFEKDGVELVVDNISY 498
           +R+KEL +     KMLRL VETGGCSGFQY F LDN  N DDRVFEK+GV+LVVDN+SY
Sbjct: 658 RRMKELQSSEPEKKMLRLGVETGGCSGFQYKFELDNRTNPDDRVFEKNGVKLVVDNVSY 716


Top