BLASTX nr result
ID: Dioscorea21_contig00024917
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00024917
(1394 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003555416.1| PREDICTED: tRNA pseudouridine synthase 3-lik... 422 e-115
ref|XP_002467782.1| hypothetical protein SORBIDRAFT_01g033960 [S... 421 e-115
ref|XP_003535557.1| PREDICTED: tRNA pseudouridine synthase 3-lik... 421 e-115
ref|NP_001145731.1| uncharacterized protein LOC100279238 [Zea ma... 421 e-115
gb|ACF87175.1| unknown [Zea mays] gi|195612012|gb|ACG27836.1| hy... 421 e-115
>ref|XP_003555416.1| PREDICTED: tRNA pseudouridine synthase 3-like [Glycine max]
Length = 426
Score = 422 bits (1085), Expect = e-115
Identities = 206/314 (65%), Positives = 247/314 (78%), Gaps = 4/314 (1%)
Frame = +1
Query: 310 SEIFRALEKTKLLVDNKEKSQYSRCGRTDKGVSSTGQVIAIYLRSKVKNNGRNNDNEKTI 489
SE+F+A EKT+LLV +K++SQYSRCGRTDKGVSS GQVIA++LRS +K + NN N +
Sbjct: 110 SELFKAFEKTRLLVGDKKESQYSRCGRTDKGVSSVGQVIALFLRSNLKISATNNGNSGVV 169
Query: 490 FGENYEGEIDYVRVLNRVLPKDIRVIGWCPAPAKFHARFKCLSREYKYLFWCESLDIAAM 669
E +EGEIDYV VLNRVLP DIR++GWCPAP FHARF CLSREYKY FW E+L+I A+
Sbjct: 170 LDEQHEGEIDYVGVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIPAI 229
Query: 670 QKAAQKFVGEHDFRNFCKMDAANVNNYTRKITTFEISSCGKRFEENELCAMTIRGSAFLW 849
+ A K VGEHDFRNFCKMDAANV+NY R IT FEISS R+ +N+L + IRGSAFLW
Sbjct: 230 EVAGNKLVGEHDFRNFCKMDAANVHNYRRCITLFEISSTDVRYNDNQLWVIKIRGSAFLW 289
Query: 850 HQVRCMVAVLFMIGQGFESPEIVDVLLDIGKTPRKPQYNMASDLPLILRSCEFEDINFIC 1029
HQVRCMVAVLFM+G+G ESP ++D+LLD + RKPQY MAS++PL+L+SCEF++I F+C
Sbjct: 290 HQVRCMVAVLFMVGKGLESPNVIDMLLDTSRILRKPQYTMASEVPLVLQSCEFDNIKFMC 349
Query: 1030 SSDAGRALREHLKNEYQTHMLQAAIFHEA-LSCTSLPETSSM---NLGKKPKGHVPLLLR 1197
SSDAG ALR HL NE Q + LQAAIFHEA L+C L S+ KK HVPL+ R
Sbjct: 350 SSDAGEALRVHLVNECQIYQLQAAIFHEALLNCVPLSNDQSLLPFQGSKKKVSHVPLMSR 409
Query: 1198 PTEPSFEERRAKLN 1239
PTEPS+EERRAKLN
Sbjct: 410 PTEPSYEERRAKLN 423
>ref|XP_002467782.1| hypothetical protein SORBIDRAFT_01g033960 [Sorghum bicolor]
gi|241921636|gb|EER94780.1| hypothetical protein
SORBIDRAFT_01g033960 [Sorghum bicolor]
Length = 459
Score = 421 bits (1083), Expect = e-115
Identities = 203/312 (65%), Positives = 247/312 (79%)
Frame = +1
Query: 310 SEIFRALEKTKLLVDNKEKSQYSRCGRTDKGVSSTGQVIAIYLRSKVKNNGRNNDNEKTI 489
SEIF+ALE+ KL+V ++++S YSRCGRTDKGVS+TGQVI++YLRS +K+ G + +E++
Sbjct: 150 SEIFKALERAKLMVGSRKESCYSRCGRTDKGVSATGQVISLYLRSNIKDVGGDMLDERS- 208
Query: 490 FGENYEGEIDYVRVLNRVLPKDIRVIGWCPAPAKFHARFKCLSREYKYLFWCESLDIAAM 669
EIDYV+VLNR+LP+DIRV+GWCP PA FHARF CLSREYKYLFW LDI M
Sbjct: 209 -------EIDYVKVLNRILPRDIRVLGWCPVPADFHARFTCLSREYKYLFWKGDLDILEM 261
Query: 670 QKAAQKFVGEHDFRNFCKMDAANVNNYTRKITTFEISSCGKRFEENELCAMTIRGSAFLW 849
QKAA KF+GEHDFRNFCKMDAANV+NY R+IT F IS+C +R +ELC+M I+GSAFLW
Sbjct: 262 QKAASKFIGEHDFRNFCKMDAANVSNYRRRITEFTISACDRRSNNDELCSMMIKGSAFLW 321
Query: 850 HQVRCMVAVLFMIGQGFESPEIVDVLLDIGKTPRKPQYNMASDLPLILRSCEFEDINFIC 1029
HQVRCMVAVLF+IGQG ESP +VD LLDI KTPRKPQY MA +LPLILRSC F+ NF+C
Sbjct: 322 HQVRCMVAVLFLIGQGLESPSVVDSLLDITKTPRKPQYKMAPELPLILRSCLFDKANFMC 381
Query: 1030 SSDAGRALREHLKNEYQTHMLQAAIFHEALSCTSLPETSSMNLGKKPKGHVPLLLRPTEP 1209
SSDA ++L EH +EY HMLQA IFH A SC PE +S+ +K + H+PLL R TEP
Sbjct: 382 SSDASQSLTEHFNDEYHHHMLQAEIFHIASSCLPFPEPNSLETLQKKRNHIPLLSRQTEP 441
Query: 1210 SFEERRAKLNLK 1245
S+EER +K+ K
Sbjct: 442 SYEERISKVKTK 453
>ref|XP_003535557.1| PREDICTED: tRNA pseudouridine synthase 3-like [Glycine max]
Length = 426
Score = 421 bits (1082), Expect = e-115
Identities = 204/314 (64%), Positives = 245/314 (78%), Gaps = 4/314 (1%)
Frame = +1
Query: 310 SEIFRALEKTKLLVDNKEKSQYSRCGRTDKGVSSTGQVIAIYLRSKVKNNGRNNDNEKTI 489
SE+F+A EKT+LLV NK++SQYSRCGRTDKGVSS GQVIA++LRS +K + NN N +
Sbjct: 110 SELFKAFEKTRLLVGNKKESQYSRCGRTDKGVSSVGQVIALFLRSNLKISETNNGNSGVV 169
Query: 490 FGENYEGEIDYVRVLNRVLPKDIRVIGWCPAPAKFHARFKCLSREYKYLFWCESLDIAAM 669
E +EGEIDYVRVLNRVLP DIR++GWCPAP FHARF CLSREYKY FW E+L+I AM
Sbjct: 170 LDEQHEGEIDYVRVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIQAM 229
Query: 670 QKAAQKFVGEHDFRNFCKMDAANVNNYTRKITTFEISSCGKRFEENELCAMTIRGSAFLW 849
+ A K VGEHDFRNFCKMDAANV+NY R+I FEIS R+ +N+L + IRGSAFLW
Sbjct: 230 ESAGNKLVGEHDFRNFCKMDAANVHNYRRRIKLFEISPTDVRYNDNQLWVIKIRGSAFLW 289
Query: 850 HQVRCMVAVLFMIGQGFESPEIVDVLLDIGKTPRKPQYNMASDLPLILRSCEFEDINFIC 1029
HQVRCMV VLFM+G+G ESP ++D+LLD + RKPQY MAS++PL+L+SCEF++I F+C
Sbjct: 290 HQVRCMVVVLFMVGKGLESPNVIDMLLDTARILRKPQYTMASEVPLVLQSCEFDNIKFMC 349
Query: 1030 SSDAGRALREHLKNEYQTHMLQAAIFHEA-LSCTSLPETSSM---NLGKKPKGHVPLLLR 1197
SS+AG AL HL NE Q + LQAAIFHEA L+C L S+ KK HVPL+ R
Sbjct: 350 SSEAGEALHVHLVNECQIYQLQAAIFHEALLNCVPLSNDQSLLHFQGSKKKVSHVPLMSR 409
Query: 1198 PTEPSFEERRAKLN 1239
PTEPS+EERRAKLN
Sbjct: 410 PTEPSYEERRAKLN 423
>ref|NP_001145731.1| uncharacterized protein LOC100279238 [Zea mays]
gi|219884209|gb|ACL52479.1| unknown [Zea mays]
gi|414867029|tpg|DAA45586.1| TPA: pseudouridylate
synthase [Zea mays]
Length = 486
Score = 421 bits (1082), Expect = e-115
Identities = 204/312 (65%), Positives = 247/312 (79%)
Frame = +1
Query: 310 SEIFRALEKTKLLVDNKEKSQYSRCGRTDKGVSSTGQVIAIYLRSKVKNNGRNNDNEKTI 489
SEIF+ALE+ KL+V N+++S YSRCGRTDKGVS+TGQVI++YLRS +K+ G + +E++
Sbjct: 177 SEIFKALERAKLMVANRKESCYSRCGRTDKGVSATGQVISLYLRSNIKDVGGDMLDERS- 235
Query: 490 FGENYEGEIDYVRVLNRVLPKDIRVIGWCPAPAKFHARFKCLSREYKYLFWCESLDIAAM 669
EIDYV+VLNR+LP+DIRV+GWCP PA FHARF CLSREYKYLFW LDI M
Sbjct: 236 -------EIDYVKVLNRILPRDIRVLGWCPVPADFHARFTCLSREYKYLFWKGDLDILEM 288
Query: 670 QKAAQKFVGEHDFRNFCKMDAANVNNYTRKITTFEISSCGKRFEENELCAMTIRGSAFLW 849
QKAA KF+GEHDFRNFCKMDAANV+NY R IT F IS+C +R +ELC+MTI+GSAFLW
Sbjct: 289 QKAASKFIGEHDFRNFCKMDAANVSNYRRHITEFTISACDRRSNNDELCSMTIKGSAFLW 348
Query: 850 HQVRCMVAVLFMIGQGFESPEIVDVLLDIGKTPRKPQYNMASDLPLILRSCEFEDINFIC 1029
HQVRCMVAVLF+IGQG ESP +VD LLDI KT RKPQY MA +LPLIL+SC F+ NF+C
Sbjct: 349 HQVRCMVAVLFLIGQGLESPSVVDSLLDIMKTSRKPQYKMAPELPLILQSCLFDKANFMC 408
Query: 1030 SSDAGRALREHLKNEYQTHMLQAAIFHEALSCTSLPETSSMNLGKKPKGHVPLLLRPTEP 1209
S+DA R+L EHL +EY+ HMLQA IFH A SC PE +S +K + H+PLL R TEP
Sbjct: 409 SADASRSLTEHLNDEYRHHMLQAEIFHIASSCLPFPEPNSSETPQKKRNHIPLLSRETEP 468
Query: 1210 SFEERRAKLNLK 1245
S+EER +K+ K
Sbjct: 469 SYEERISKVKAK 480
>gb|ACF87175.1| unknown [Zea mays] gi|195612012|gb|ACG27836.1| hypothetical protein
[Zea mays] gi|414867030|tpg|DAA45587.1| TPA:
pseudouridylate synthase isoform 1 [Zea mays]
gi|414867031|tpg|DAA45588.1| TPA: pseudouridylate
synthase isoform 2 [Zea mays]
gi|414867032|tpg|DAA45589.1| TPA: pseudouridylate
synthase isoform 3 [Zea mays]
gi|414867033|tpg|DAA45590.1| TPA: pseudouridylate
synthase isoform 4 [Zea mays]
Length = 457
Score = 421 bits (1082), Expect = e-115
Identities = 204/312 (65%), Positives = 247/312 (79%)
Frame = +1
Query: 310 SEIFRALEKTKLLVDNKEKSQYSRCGRTDKGVSSTGQVIAIYLRSKVKNNGRNNDNEKTI 489
SEIF+ALE+ KL+V N+++S YSRCGRTDKGVS+TGQVI++YLRS +K+ G + +E++
Sbjct: 148 SEIFKALERAKLMVANRKESCYSRCGRTDKGVSATGQVISLYLRSNIKDVGGDMLDERS- 206
Query: 490 FGENYEGEIDYVRVLNRVLPKDIRVIGWCPAPAKFHARFKCLSREYKYLFWCESLDIAAM 669
EIDYV+VLNR+LP+DIRV+GWCP PA FHARF CLSREYKYLFW LDI M
Sbjct: 207 -------EIDYVKVLNRILPRDIRVLGWCPVPADFHARFTCLSREYKYLFWKGDLDILEM 259
Query: 670 QKAAQKFVGEHDFRNFCKMDAANVNNYTRKITTFEISSCGKRFEENELCAMTIRGSAFLW 849
QKAA KF+GEHDFRNFCKMDAANV+NY R IT F IS+C +R +ELC+MTI+GSAFLW
Sbjct: 260 QKAASKFIGEHDFRNFCKMDAANVSNYRRHITEFTISACDRRSNNDELCSMTIKGSAFLW 319
Query: 850 HQVRCMVAVLFMIGQGFESPEIVDVLLDIGKTPRKPQYNMASDLPLILRSCEFEDINFIC 1029
HQVRCMVAVLF+IGQG ESP +VD LLDI KT RKPQY MA +LPLIL+SC F+ NF+C
Sbjct: 320 HQVRCMVAVLFLIGQGLESPSVVDSLLDIMKTSRKPQYKMAPELPLILQSCLFDKANFMC 379
Query: 1030 SSDAGRALREHLKNEYQTHMLQAAIFHEALSCTSLPETSSMNLGKKPKGHVPLLLRPTEP 1209
S+DA R+L EHL +EY+ HMLQA IFH A SC PE +S +K + H+PLL R TEP
Sbjct: 380 SADASRSLTEHLNDEYRHHMLQAEIFHIASSCLPFPEPNSSETPQKKRNHIPLLSRETEP 439
Query: 1210 SFEERRAKLNLK 1245
S+EER +K+ K
Sbjct: 440 SYEERISKVKAK 451