BLASTX nr result

ID: Dioscorea21_contig00024903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024903
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA47335.1| TPA: hypothetical protein ZEAMMB73_469310 [Zea m...   102   4e-20
ref|XP_002442435.1| hypothetical protein SORBIDRAFT_08g020025 [S...    97   1e-18
ref|NP_001067177.2| Os12g0594200 [Oryza sativa Japonica Group] g...    96   3e-18
ref|XP_002877744.1| hypothetical protein ARALYDRAFT_485391 [Arab...    95   5e-18
ref|XP_002522375.1| hypothetical protein RCOM_0603640 [Ricinus c...    95   5e-18

>tpg|DAA47335.1| TPA: hypothetical protein ZEAMMB73_469310 [Zea mays]
          Length = 675

 Score =  102 bits (253), Expect = 4e-20
 Identities = 53/106 (50%), Positives = 72/106 (67%), Gaps = 7/106 (6%)
 Frame = +3

Query: 3   PTVRTLCEHLFVHYTIHKLHEEASKFLVGMRSKTKKD-GDKVE---PSKDG---RKKHAW 161
           PTV TLCEHLFV + +  LH EASK + G+ S+ KK  G++VE   P+  G   ++   W
Sbjct: 571 PTVLTLCEHLFVSFAVRVLHREASKAIAGVMSRVKKPTGEEVEGDSPASGGVLCKRNRLW 630

Query: 162 TRALGKFVLSSMFAYVNGWLCRHLPSPIVRRIASGFLLSFLDKNSS 299
           T  +G+F +S M AYV+G LCRH+P+PI RRI SGFLLSF++   +
Sbjct: 631 T--VGRFAVSGMVAYVDGRLCRHIPNPIARRIVSGFLLSFIENRGN 674


>ref|XP_002442435.1| hypothetical protein SORBIDRAFT_08g020025 [Sorghum bicolor]
            gi|241943128|gb|EES16273.1| hypothetical protein
            SORBIDRAFT_08g020025 [Sorghum bicolor]
          Length = 2942

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 51/107 (47%), Positives = 68/107 (63%), Gaps = 8/107 (7%)
 Frame = +3

Query: 3    PTVRTLCEHLFVHYTIHKLHEEASKFLVGMRSKTKK-----DGDKVEPSKDG---RKKHA 158
            PTV TLCEHLFV + +  LH EASK + G  S+ KK     +G+    S  G   ++   
Sbjct: 2837 PTVLTLCEHLFVSFAVRVLHREASKAISGAMSRVKKPSVGEEGEGDSSSSGGVLCKRNRL 2896

Query: 159  WTRALGKFVLSSMFAYVNGWLCRHLPSPIVRRIASGFLLSFLDKNSS 299
            WT  +G+F +S M AYV+G LCRH+P+PI RRI SGFLLSF++   +
Sbjct: 2897 WT--VGRFAVSGMVAYVDGRLCRHIPNPISRRIVSGFLLSFIENRGN 2941


>ref|NP_001067177.2| Os12g0594200 [Oryza sativa Japonica Group]
            gi|255670445|dbj|BAF30196.2| Os12g0594200 [Oryza sativa
            Japonica Group]
          Length = 2895

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 51/111 (45%), Positives = 67/111 (60%), Gaps = 12/111 (10%)
 Frame = +3

Query: 3    PTVRTLCEHLFVHYTIHKLHEEASKFLVGMRSKTKK-------DGDKVEPSKDG-----R 146
            PTV TL EHLFV + +  LH EA+K + G+ SK K+       DG    PS        R
Sbjct: 2786 PTVLTLAEHLFVSFAVRVLHREATKAIAGVVSKAKRPAGGGEDDGKGESPSSSSVGVLAR 2845

Query: 147  KKHAWTRALGKFVLSSMFAYVNGWLCRHLPSPIVRRIASGFLLSFLDKNSS 299
            +   W+  +G+F +S M AYV+G LCRH+P+PI RRI SGFLLSF+D   +
Sbjct: 2846 RSRVWS--VGRFAVSGMVAYVDGRLCRHIPNPIARRIVSGFLLSFIDSRDN 2894


>ref|XP_002877744.1| hypothetical protein ARALYDRAFT_485391 [Arabidopsis lyrata subsp.
            lyrata] gi|297323582|gb|EFH54003.1| hypothetical protein
            ARALYDRAFT_485391 [Arabidopsis lyrata subsp. lyrata]
          Length = 3074

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 50/111 (45%), Positives = 65/111 (58%), Gaps = 13/111 (11%)
 Frame = +3

Query: 3    PTVRTLCEHLFVHYTIHKLHEEASKFLVGMRSK-------TKKDGDK------VEPSKDG 143
            PTV TLCEHLFV + I  L + A+K + G+R K       T   G        +  +K  
Sbjct: 2962 PTVMTLCEHLFVSFAIRILKQHATKVITGLRPKKEEAEAETSDSGSNTAMVPVISDNKKK 3021

Query: 144  RKKHAWTRALGKFVLSSMFAYVNGWLCRHLPSPIVRRIASGFLLSFLDKNS 296
            + K  W   +G FV S + AY++G LCR +P+PI RRI SGFLLSFLDK+S
Sbjct: 3022 KMKFMWKAGIGNFVASGIVAYIDGRLCRQIPNPIARRIVSGFLLSFLDKSS 3072


>ref|XP_002522375.1| hypothetical protein RCOM_0603640 [Ricinus communis]
            gi|223538453|gb|EEF40059.1| hypothetical protein
            RCOM_0603640 [Ricinus communis]
          Length = 1361

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/106 (44%), Positives = 70/106 (66%), Gaps = 7/106 (6%)
 Frame = +3

Query: 3    PTVRTLCEHLFVHYTIHKLHEEASKFLVGM--RSKTKKDGDKV----EPSKDGRK-KHAW 161
            PTV TLCEHLFV + I  L ++  K    +  + ++K D DK     +P+K+ ++ K  W
Sbjct: 1221 PTVITLCEHLFVSFAIRMLRKQTGKLKANVMWKKESKSDDDKAVVRADPNKEEQRLKFVW 1280

Query: 162  TRALGKFVLSSMFAYVNGWLCRHLPSPIVRRIASGFLLSFLDKNSS 299
               +GKFV S++ AY++G LCR +P+P+ RRI SG+LLSFLD+N +
Sbjct: 1281 KWGIGKFVFSAILAYIDGRLCRGIPNPVARRIVSGYLLSFLDRNGT 1326


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