BLASTX nr result

ID: Dioscorea21_contig00024894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024894
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323898.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|XP_002527612.1| conserved hypothetical protein [Ricinus comm...    87   2e-15
emb|CBI21205.3| unnamed protein product [Vitis vinifera]               84   1e-14
ref|XP_003558500.1| PREDICTED: protein RIK-like [Brachypodium di...    82   5e-14
ref|XP_003633772.1| PREDICTED: protein RIK-like [Vitis vinifera]       81   1e-13

>ref|XP_002323898.1| predicted protein [Populus trichocarpa] gi|222866900|gb|EEF04031.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/73 (61%), Positives = 59/73 (80%)
 Frame = +3

Query: 6   AHLKDTVERIKAVDHAACMVEDMLKQCQSSLPASTVLPSVFSDGLATQSLNTCLYLGFEP 185
           AHLKDT ERI AVD AA MV++MLKQ QSS PAS+++     +G+  ++L+TC++LGF+ 
Sbjct: 179 AHLKDTAERILAVDRAAAMVDEMLKQGQSSQPASSIIQMPAVNGV--KALSTCVFLGFDT 236

Query: 186 DPSLNIAARIRGP 224
           DP+LNIAARIRGP
Sbjct: 237 DPTLNIAARIRGP 249


>ref|XP_002527612.1| conserved hypothetical protein [Ricinus communis]
           gi|223532986|gb|EEF34751.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 586

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 45/74 (60%), Positives = 56/74 (75%)
 Frame = +3

Query: 3   GAHLKDTVERIKAVDHAACMVEDMLKQCQSSLPASTVLPSVFSDGLATQSLNTCLYLGFE 182
           GAHLKDT ERI AVD AA MVE++LKQ  +  PA +V+P   + G   ++L+TC+YLGF+
Sbjct: 133 GAHLKDTAERILAVDRAAAMVEEILKQGPNLQPALSVVP--VASGSGVKALSTCVYLGFD 190

Query: 183 PDPSLNIAARIRGP 224
            D SLNIAARIRGP
Sbjct: 191 ADESLNIAARIRGP 204


>emb|CBI21205.3| unnamed protein product [Vitis vinifera]
          Length = 659

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 2/76 (2%)
 Frame = +3

Query: 3   GAHLKDTVERIKAVDHAACMVEDMLKQCQS--SLPASTVLPSVFSDGLATQSLNTCLYLG 176
           GAHLKDT ERIKAVD AA MVE+MLKQ Q+  S+P+++ L    + G+ TQ+ +TC++LG
Sbjct: 209 GAHLKDTAERIKAVDRAAAMVEEMLKQGQNSESVPSNSHLAG--NTGV-TQAPSTCVFLG 265

Query: 177 FEPDPSLNIAARIRGP 224
           FE DPSLNIAA IRGP
Sbjct: 266 FEADPSLNIAACIRGP 281


>ref|XP_003558500.1| PREDICTED: protein RIK-like [Brachypodium distachyon]
          Length = 661

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/74 (55%), Positives = 52/74 (70%)
 Frame = +3

Query: 3   GAHLKDTVERIKAVDHAACMVEDMLKQCQSSLPASTVLPSVFSDGLATQSLNTCLYLGFE 182
           G+ LKDT ERIKAVD AA M+E++LKQ Q     ST  PS+ S+  A    +  ++LGF+
Sbjct: 168 GSQLKDTAERIKAVDRAASMIEEILKQGQMPETTSTHFPSIQSNKQAVHPFSASIFLGFD 227

Query: 183 PDPSLNIAARIRGP 224
            DPSLN+AARIRGP
Sbjct: 228 ADPSLNVAARIRGP 241


>ref|XP_003633772.1| PREDICTED: protein RIK-like [Vitis vinifera]
          Length = 566

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 45/74 (60%), Positives = 51/74 (68%)
 Frame = +3

Query: 3   GAHLKDTVERIKAVDHAACMVEDMLKQCQSSLPASTVLPSVFSDGLATQSLNTCLYLGFE 182
           GAHLKDT ERIKAVD AA MVE+MLKQ Q+S                TQ+ +TC++LGFE
Sbjct: 255 GAHLKDTAERIKAVDRAAAMVEEMLKQGQNS-------------ESVTQAPSTCVFLGFE 301

Query: 183 PDPSLNIAARIRGP 224
            DPSLNIAA IRGP
Sbjct: 302 ADPSLNIAACIRGP 315


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