BLASTX nr result

ID: Dioscorea21_contig00024888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024888
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001062151.1| Os08g0499900 [Oryza sativa Japonica Group] g...   124   6e-27
gb|EEE68945.1| hypothetical protein OsJ_27827 [Oryza sativa Japo...   124   6e-27
gb|EEC83822.1| hypothetical protein OsI_29762 [Oryza sativa Indi...   124   6e-27
dbj|BAJ93635.1| predicted protein [Hordeum vulgare subsp. vulgare]    122   2e-26
ref|XP_003574701.1| PREDICTED: F-box protein At-B-like [Brachypo...   117   1e-24

>ref|NP_001062151.1| Os08g0499900 [Oryza sativa Japonica Group]
           gi|42407347|dbj|BAD08808.1| F-box protein family-like
           [Oryza sativa Japonica Group]
           gi|113624120|dbj|BAF24065.1| Os08g0499900 [Oryza sativa
           Japonica Group]
          Length = 443

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/122 (50%), Positives = 88/122 (72%)
 Frame = -1

Query: 367 TSSINVAMGFGLQSLTLVLNLITDDLLVCITGNLRHLVELCLEDRPVYQPPPPNDLTGLG 188
           ++S+  ++   L+SL+LVL++ITD+L+  ITG+L +LVELCLED P+ +P   NDLT +G
Sbjct: 49  STSLKTSISNTLESLSLVLDIITDELVAFITGSLHNLVELCLEDNPMKEPDLHNDLTNVG 108

Query: 187 LQALSSCKGLACLTLIRSKIYCPATFKSVKDVDMQLLAEGCSRFESIKLGGFSKVTDAGY 8
           LQAL  C  LA L+L R K  C +TF+ V D  + +LA+GC + ++I+L GFSKV DAGY
Sbjct: 109 LQALGLCHNLAHLSLTRGKQNCSSTFRRVTDFGIMMLADGCKQLKTIRLAGFSKVRDAGY 168

Query: 7   VS 2
            +
Sbjct: 169 AA 170


>gb|EEE68945.1| hypothetical protein OsJ_27827 [Oryza sativa Japonica Group]
          Length = 619

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/122 (50%), Positives = 88/122 (72%)
 Frame = -1

Query: 367 TSSINVAMGFGLQSLTLVLNLITDDLLVCITGNLRHLVELCLEDRPVYQPPPPNDLTGLG 188
           ++S+  ++   L+SL+LVL++ITD+L+  ITG+L +LVELCLED P+ +P   NDLT +G
Sbjct: 225 STSLKTSISNTLESLSLVLDIITDELVAFITGSLHNLVELCLEDNPMKEPDLHNDLTNVG 284

Query: 187 LQALSSCKGLACLTLIRSKIYCPATFKSVKDVDMQLLAEGCSRFESIKLGGFSKVTDAGY 8
           LQAL  C  LA L+L R K  C +TF+ V D  + +LA+GC + ++I+L GFSKV DAGY
Sbjct: 285 LQALGLCHNLAHLSLTRGKQNCSSTFRRVTDFGIMMLADGCKQLKTIRLAGFSKVRDAGY 344

Query: 7   VS 2
            +
Sbjct: 345 AA 346


>gb|EEC83822.1| hypothetical protein OsI_29762 [Oryza sativa Indica Group]
          Length = 580

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/122 (50%), Positives = 88/122 (72%)
 Frame = -1

Query: 367 TSSINVAMGFGLQSLTLVLNLITDDLLVCITGNLRHLVELCLEDRPVYQPPPPNDLTGLG 188
           ++S+  ++   L+SL+LVL++ITD+L+  ITG+L +LVELCLED P+ +P   NDLT +G
Sbjct: 225 STSLKTSISNTLESLSLVLDIITDELVAFITGSLHNLVELCLEDNPMKEPDLHNDLTNVG 284

Query: 187 LQALSSCKGLACLTLIRSKIYCPATFKSVKDVDMQLLAEGCSRFESIKLGGFSKVTDAGY 8
           LQAL  C  LA L+L R K  C +TF+ V D  + +LA+GC + ++I+L GFSKV DAGY
Sbjct: 285 LQALGLCHNLAHLSLTRGKQNCSSTFRRVTDFGIMMLADGCKQLKTIRLAGFSKVRDAGY 344

Query: 7   VS 2
            +
Sbjct: 345 AA 346


>dbj|BAJ93635.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 621

 Score =  122 bits (307), Expect = 2e-26
 Identities = 61/122 (50%), Positives = 85/122 (69%)
 Frame = -1

Query: 367 TSSINVAMGFGLQSLTLVLNLITDDLLVCITGNLRHLVELCLEDRPVYQPPPPNDLTGLG 188
           +SS+       L+SL+LVL++ITD+L+  ITG+L +L+ELCLED P  +    NDLT +G
Sbjct: 222 SSSLKTPFSDSLESLSLVLDIITDELVTFITGSLSNLLELCLEDNPGSEADLDNDLTNIG 281

Query: 187 LQALSSCKGLACLTLIRSKIYCPATFKSVKDVDMQLLAEGCSRFESIKLGGFSKVTDAGY 8
           LQAL  C+ L  L+L R K  C +TF+ V D  + +LAEGC + ++I+LGGFSKV DAGY
Sbjct: 282 LQALGLCQNLTHLSLTRGKQGCSSTFRRVNDFGLLMLAEGCKQLQTIRLGGFSKVRDAGY 341

Query: 7   VS 2
            +
Sbjct: 342 AA 343


>ref|XP_003574701.1| PREDICTED: F-box protein At-B-like [Brachypodium distachyon]
          Length = 616

 Score =  117 bits (293), Expect = 1e-24
 Identities = 58/120 (48%), Positives = 82/120 (68%)
 Frame = -1

Query: 361 SINVAMGFGLQSLTLVLNLITDDLLVCITGNLRHLVELCLEDRPVYQPPPPNDLTGLGLQ 182
           S+       L+SL+LVL++ITD+L+  IT +L +L+ELCLED P  +    NDL+ +GLQ
Sbjct: 224 SLKTPFSDSLESLSLVLDIITDELITFITTSLSNLLELCLEDNPGSETDLHNDLSNIGLQ 283

Query: 181 ALSSCKGLACLTLIRSKIYCPATFKSVKDVDMQLLAEGCSRFESIKLGGFSKVTDAGYVS 2
           A+  CK L  L+L R K  C +TF+ V D  + +LAEGC + ++I+LGGFSKV DAGY +
Sbjct: 284 AIGICKNLTHLSLTRGKQNCSSTFRRVNDFGILMLAEGCKKLQTIRLGGFSKVRDAGYAA 343


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