BLASTX nr result

ID: Dioscorea21_contig00024876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024876
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73536.1| hypothetical protein VITISV_042993 [Vitis vinifera]    92   4e-17
emb|CAN79660.1| hypothetical protein VITISV_004324 [Vitis vinifera]    78   9e-13
emb|CAN60456.1| hypothetical protein VITISV_019554 [Vitis vinifera]    73   3e-11
gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]            72   5e-11
emb|CAN80368.1| hypothetical protein VITISV_014720 [Vitis vinifera]    72   5e-11

>emb|CAN73536.1| hypothetical protein VITISV_042993 [Vitis vinifera]
          Length = 594

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 51/100 (51%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = +2

Query: 2   SKPLQVYTRRNNLQTPPVSQPSPS-LHSADDPDDLPIALRKGKRSCTQHSIPPVVSFTHL 178
           SKPLQVYTRR  LQTP    PSP+ ++S              KR CTQHSI  VVSF  L
Sbjct: 316 SKPLQVYTRRKALQTPCAPDPSPTPMYSTS------------KRFCTQHSIASVVSFDRL 363

Query: 179 GPVFRHLVLSLSSISIPKNYLESVQDPHWKEAMNEEMSTL 298
           G       LS SS+SIPK+Y E++Q+ +WK+AM++EMS L
Sbjct: 364 GSSISRFALSFSSVSIPKDYQEAIQNHNWKKAMDKEMSAL 403


>emb|CAN79660.1| hypothetical protein VITISV_004324 [Vitis vinifera]
          Length = 338

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 48/112 (42%), Positives = 65/112 (58%), Gaps = 13/112 (11%)
 Frame = +2

Query: 2   SKPLQVYTRRNNLQTPPVSQPSPSLH--------SADDPDD-----LPIALRKGKRSCTQ 142
           S PL+VY+RR  +Q    S  +P++H        +   P+D     LPI LRK KR CTQ
Sbjct: 83  STPLKVYSRR--MQPALESLHAPTIHPDKGIENQTISTPNDISNLDLPIVLRKEKRQCTQ 140

Query: 143 HSIPPVVSFTHLGPVFRHLVLSLSSISIPKNYLESVQDPHWKEAMNEEMSTL 298
           H +   VSF +L   +R  V  LSSI IPK+  E++ D +WK+AM EEM+ L
Sbjct: 141 HPLSNFVSFENLSSSYRAFVSRLSSIKIPKSVQEALSDENWKKAMLEEMNAL 192


>emb|CAN60456.1| hypothetical protein VITISV_019554 [Vitis vinifera]
          Length = 1552

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
 Frame = +2

Query: 44  TPPVSQPSPSLH-----SADDPD-DLPIALRKGKRSCTQHSIPPVVSFTHLGPVFRHLVL 205
           +P +S P P L       A D D DLPIALRKG R+CT+H I   +S+++L   +R    
Sbjct: 402 SPEISAPEPGLXLTPIVPAQDVDLDLPIALRKGTRACTKHPIAKYISYSNLSDNYRAFTT 461

Query: 206 SLSSISIPKNYLESVQDPHWKEAMNEEMSTL 298
           ++S + +P+N  E++ +P WK A+ EEM+ L
Sbjct: 462 NISKLVVPRNIQEALDEPSWKLAVFEEMNAL 492


>gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]
          Length = 1382

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/97 (44%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
 Frame = +2

Query: 11   LQVYTRRNNLQTPPVSQPSPSLHSADDPDDLPIALRKGKRSCTQ-HSIPPVVSFTHLGPV 187
            +QVY+RR  + T     P+PS        DLPI+LRKGKR C   +SI   VS+ HL   
Sbjct: 800  VQVYSRRP-VTTDTCPAPAPSSSDPSSDLDLPISLRKGKRHCKSIYSIANFVSYDHLSSS 858

Query: 188  FRHLVLSLSSISIPKNYLESVQDPHWKEAMNEEMSTL 298
               LV S+ SIS+PK   E++  P WK AM EE+  L
Sbjct: 859  SSVLVASIDSISVPKTVTEALNHPGWKNAMLEEICAL 895


>emb|CAN80368.1| hypothetical protein VITISV_014720 [Vitis vinifera]
          Length = 869

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
 Frame = +2

Query: 44  TPPVSQPSPSLH-----SADDPD-DLPIALRKGKRSCTQHSIPPVVSFTHLGPVFRHLVL 205
           +P +S P P L       A D D DLPIALRKG R+CT+H I   +S+++L   +R    
Sbjct: 331 SPEISAPEPGLGLAPVVPAQDLDLDLPIALRKGTRACTKHPIAKYISYSNLSDNYRAFTT 390

Query: 206 SLSSISIPKNYLESVQDPHWKEAMNEEMSTL 298
           ++S + +P+N  E++ +P WK A+ EEM+ L
Sbjct: 391 NISKLVVPRNIQEALDEPSWKLAVFEEMNAL 421


Top