BLASTX nr result

ID: Dioscorea21_contig00024871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024871
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306748.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_002302135.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_004144632.1| PREDICTED: vacuolar protein sorting-associat...    72   6e-11
ref|XP_003599782.1| Vacuolar protein sorting-associated protein-...    72   6e-11
dbj|BAJ33734.1| unnamed protein product [Thellungiella halophila]      71   8e-11

>ref|XP_002306748.1| predicted protein [Populus trichocarpa] gi|222856197|gb|EEE93744.1|
           predicted protein [Populus trichocarpa]
          Length = 844

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/37 (94%), Positives = 36/37 (97%)
 Frame = +1

Query: 34  QVPLLLSIAEEDTALVKATESGDTDLVYLVLLHIWQK 144
           QVPLLLSIAEEDTAL+KATESGDTDLVYLVL HIWQK
Sbjct: 540 QVPLLLSIAEEDTALMKATESGDTDLVYLVLFHIWQK 576


>ref|XP_002302135.1| predicted protein [Populus trichocarpa] gi|222843861|gb|EEE81408.1|
           predicted protein [Populus trichocarpa]
          Length = 844

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/37 (94%), Positives = 36/37 (97%)
 Frame = +1

Query: 34  QVPLLLSIAEEDTALVKATESGDTDLVYLVLLHIWQK 144
           QVPLLLSIAEE+TALVKATESGDTDLVYLVL HIWQK
Sbjct: 540 QVPLLLSIAEEETALVKATESGDTDLVYLVLFHIWQK 576


>ref|XP_004144632.1| PREDICTED: vacuolar protein sorting-associated protein 16 homolog
           [Cucumis sativus] gi|449519144|ref|XP_004166595.1|
           PREDICTED: vacuolar protein sorting-associated protein
           16 homolog [Cucumis sativus]
          Length = 844

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/37 (91%), Positives = 35/37 (94%)
 Frame = +1

Query: 34  QVPLLLSIAEEDTALVKATESGDTDLVYLVLLHIWQK 144
           QVPLLLSI EEDTAL+KATESGDTDLVYLVL HIWQK
Sbjct: 540 QVPLLLSIGEEDTALIKATESGDTDLVYLVLFHIWQK 576


>ref|XP_003599782.1| Vacuolar protein sorting-associated protein-like protein [Medicago
           truncatula] gi|355488830|gb|AES70033.1| Vacuolar protein
           sorting-associated protein-like protein [Medicago
           truncatula]
          Length = 856

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/39 (87%), Positives = 36/39 (92%)
 Frame = +1

Query: 34  QVPLLLSIAEEDTALVKATESGDTDLVYLVLLHIWQKIL 150
           QVPLLLSI EEDTAL+KATE GDTDLVYLVL HIWQK+L
Sbjct: 546 QVPLLLSIGEEDTALMKATECGDTDLVYLVLFHIWQKVL 584


>dbj|BAJ33734.1| unnamed protein product [Thellungiella halophila]
          Length = 833

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/37 (91%), Positives = 35/37 (94%)
 Frame = +1

Query: 34  QVPLLLSIAEEDTALVKATESGDTDLVYLVLLHIWQK 144
           QVPLLLSI EEDTALVKATESGDTDLVYLV+ HIWQK
Sbjct: 534 QVPLLLSIGEEDTALVKATESGDTDLVYLVIFHIWQK 570


Top