BLASTX nr result

ID: Dioscorea21_contig00024866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024866
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278557.1| PREDICTED: uncharacterized protein LOC100250...    89   4e-16
dbj|BAK04341.1| predicted protein [Hordeum vulgare subsp. vulgare]     75   6e-12
ref|NP_001044185.1| Os01g0738000 [Oryza sativa Japonica Group] g...    74   2e-11
ref|XP_003567097.1| PREDICTED: uncharacterized protein LOC100843...    71   1e-10
ref|XP_002525384.1| conserved hypothetical protein [Ricinus comm...    70   2e-10

>ref|XP_002278557.1| PREDICTED: uncharacterized protein LOC100250866 [Vitis vinifera]
           gi|296087677|emb|CBI34933.3| unnamed protein product
           [Vitis vinifera]
          Length = 110

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 48/72 (66%), Positives = 53/72 (73%)
 Frame = -2

Query: 452 LNATSPSSSVPIFARISRRRLPLNIARLPVELACAQSLMPYHSATASALLNSMLSSKSGN 273
           L   + S S P  AR SR + P   +RLPVELA   S+MP HSATASALLNSMLSSK G+
Sbjct: 40  LAGVASSQSTPA-ARFSRLKYPSCSSRLPVELASTVSMMPLHSATASALLNSMLSSKVGS 98

Query: 272 WGWLSEGFATPL 237
           WGWLSEGFATPL
Sbjct: 99  WGWLSEGFATPL 110


>dbj|BAK04341.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 101

 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 48/85 (56%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
 Frame = -2

Query: 485 SPSS-SLFSNRCLNATSPSSSVPIFARISRRRLPLNIARLPVE-LACAQSLMPYHSATAS 312
           SPS+ S   +R   A SP        R  RRRL   I+R+PV  L   Q LMP HSATAS
Sbjct: 19  SPSTLSRAFSRPAVAQSPELGASALPRAPRRRLA--ISRVPVAALGGVQGLMPLHSATAS 76

Query: 311 ALLNSMLSSKSGNWGWLSEGFATPL 237
           ALL SML  K G+WGWLSEGFATPL
Sbjct: 77  ALLTSMLGLKPGSWGWLSEGFATPL 101


>ref|NP_001044185.1| Os01g0738000 [Oryza sativa Japonica Group]
           gi|57900573|dbj|BAD87025.1| unknown protein [Oryza
           sativa Japonica Group] gi|113533716|dbj|BAF06099.1|
           Os01g0738000 [Oryza sativa Japonica Group]
           gi|215692887|dbj|BAG88307.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222619221|gb|EEE55353.1| hypothetical protein
           OsJ_03385 [Oryza sativa Japonica Group]
          Length = 102

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/71 (60%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
 Frame = -2

Query: 446 ATSPSSSVPIFARISRRRLPLNIARLPVE-LACAQSLMPYHSATASALLNSMLSSKSGNW 270
           A SP  +     R +RRR    I+R+PVE L  A  LMP HSATASALL SML  K G+W
Sbjct: 34  ARSPELAAFSLPRSTRRRPA--ISRVPVEALGGAHGLMPLHSATASALLTSMLGLKPGSW 91

Query: 269 GWLSEGFATPL 237
           GWLSEGFATPL
Sbjct: 92  GWLSEGFATPL 102


>ref|XP_003567097.1| PREDICTED: uncharacterized protein LOC100843150 [Brachypodium
           distachyon]
          Length = 100

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 41/70 (58%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = -2

Query: 458 RCLNATSPSSSVPIFARISRRRLPLNIARLPVE-LACAQSLMPYHSATASALLNSMLSSK 282
           R   A SP  + P   R SRRRL   I+R+PV  L   Q LMP HSATASALL SML  K
Sbjct: 29  RTAMAQSPELAAPALPRASRRRLA--ISRVPVAALGGVQGLMPLHSATASALLTSMLGLK 86

Query: 281 SGNWGWLSEG 252
            G+WGWLSEG
Sbjct: 87  PGSWGWLSEG 96


>ref|XP_002525384.1| conserved hypothetical protein [Ricinus communis]
           gi|223535347|gb|EEF37022.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 104

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 43/86 (50%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
 Frame = -2

Query: 485 SPSSSLFSNRCLNA---TSPSSSVPIFARISRRRLPLNIARLPVELACAQSLMPYHSATA 315
           +P+SS  S    +A   + PSSS          R  LN +RLP+EL  A SLMP HS TA
Sbjct: 28  APTSSFASKAATSAGLSSRPSSST---------RFKLNSSRLPLELGAALSLMPMHSVTA 78

Query: 314 SALLNSMLSSKSGNWGWLSEGFATPL 237
           SAL  S+LS  + +WG LSEGFATPL
Sbjct: 79  SALFTSLLSLHNQSWGCLSEGFATPL 104


Top