BLASTX nr result
ID: Dioscorea21_contig00024862
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00024862
(866 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi... 283 3e-74
ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containi... 277 3e-72
ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containi... 274 2e-71
ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containi... 273 3e-71
ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containi... 273 3e-71
>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
[Vitis vinifera]
Length = 738
Score = 283 bits (725), Expect = 3e-74
Identities = 137/264 (51%), Positives = 189/264 (71%), Gaps = 2/264 (0%)
Frame = +3
Query: 3 LELGKWIHAYIKRNDIEMGAT-LCSALIDMYAKCGCIKLSLEVFESMQCKDL-VWSTIIG 176
L+LGKWIHAYI + + + T L ++LIDMYAKCG I+ + +VF M+ K L W+ +I
Sbjct: 381 LDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMIS 440
Query: 177 GLSMNGHSKLALEYFERMIECGGVPDSITFIGVLSACSHAGLIEEGKHYFLLMTEVYGIP 356
GL+M+GH+ +ALE F +M + G PD ITF+GVLSACSHAGL+E G+ F M E Y I
Sbjct: 441 GLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDIS 500
Query: 357 PTSEHCGCMVDLFARQGLLSEAKDFIDGISISSNGTAIWGALLGACSIYGNLELAEYAAR 536
P +H GCM+DL R GL EA+ + + + +G AIWG+LLGAC ++GN+EL E+AA+
Sbjct: 501 PKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDG-AIWGSLLGACRVHGNVELGEFAAK 559
Query: 537 HLLAINPTNSGAYVLLSNVYAKASRWSDVRKVRNMMKERGIDKIPGCSSIEVNGVVHEFF 716
HL + P N GAYVLLSN+YA A RW DV ++R + ++G+ K+PGCSSIEV+ VVHEF
Sbjct: 560 HLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFL 619
Query: 717 VGDFSHSQGEEIYMMLNRLEKMLQ 788
VGD H Q ++IY ML+ ++++L+
Sbjct: 620 VGDKVHEQSQDIYKMLDEIDQLLE 643
Score = 97.8 bits (242), Expect = 3e-18
Identities = 54/175 (30%), Positives = 100/175 (57%), Gaps = 2/175 (1%)
Frame = +3
Query: 3 LELGKWIHAYIKRNDIEMGATLCSALIDMYAKCGCIKLSLEVFESMQCKDLV-WSTIIGG 179
LELG W+ ++I+ + + L +ALIDMY+KCG + + ++FE + KD++ W+ +IGG
Sbjct: 280 LELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGG 339
Query: 180 LSMNGHSKLALEYFERMIECGGVPDSITFIGVLSACSHAGLIEEGKHYFLLMTEVY-GIP 356
S K AL F +M + P+ +TF+ +L AC++ G ++ GK + + + G+
Sbjct: 340 YSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLT 399
Query: 357 PTSEHCGCMVDLFARQGLLSEAKDFIDGISISSNGTAIWGALLGACSIYGNLELA 521
TS ++D++A+ G + AK G+ S G+ W A++ +++G+ +A
Sbjct: 400 NTSLWTS-LIDMYAKCGNIEAAKQVFAGMKPKSLGS--WNAMISGLAMHGHANMA 451
Score = 70.1 bits (170), Expect = 6e-10
Identities = 56/232 (24%), Positives = 104/232 (44%), Gaps = 36/232 (15%)
Frame = +3
Query: 72 SALIDMYAKCGCIKLSLEVFESMQCKDLV-WSTIIGGLSMNGHSKLALEYFERMIECGGV 248
+ALI Y GC+ + +FE + +D V W+ +I G + +G + AL +F+ M
Sbjct: 202 TALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVA 261
Query: 249 PDSITFIGVLSACSHAGLIEEGKHYFLLMTEVYGIPPTSEHCGCMVDLFARQGLLSEAKD 428
P+ T + VLSAC+ +G +E G ++ E +G+ ++D++++ G L +A+D
Sbjct: 262 PNESTMVTVLSACAQSGSLELG-NWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARD 320
Query: 429 FIDGI---SISSNGTAIWG------------------------------ALLGACSIYGN 509
+GI I S I G ++L AC+ G
Sbjct: 321 LFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGA 380
Query: 510 LELAEYAARHL--LAINPTNSGAYVLLSNVYAKASRWSDVRKVRNMMKERGI 659
L+L ++ ++ + TN+ + L ++YAK ++V MK + +
Sbjct: 381 LDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSL 432
Score = 56.6 bits (135), Expect = 7e-06
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Frame = +3
Query: 15 KWIHAYIKRNDIEMGATLCSALIDMYA--KCGCIKLSLEVFESM-QCKDLVWSTIIGGLS 185
K IH+ I + + S LI+ A G + +L +FES+ Q +W+T+I G S
Sbjct: 49 KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNS 108
Query: 186 MNGHSKLALEYFERMIECGGVPDSITFIGVLSACSHAGLIEEGK----HYFLLMTEVYGI 353
++ A++++ RM+ CG P+S TF +L +C+ G +EGK H L E
Sbjct: 109 LSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPF 168
Query: 354 PPTSEHCGCMVDLFARQGLLSEAK------DFIDGISISS--NGTAIWGALLGACSIYGN 509
TS +++++A+ G L A+ D +S ++ G + G L A ++
Sbjct: 169 VHTS-----LINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEE 223
Query: 510 LELAEYAARHLLAINPTNSGAY 575
+ + + + + + SG +
Sbjct: 224 IPVRDAVSWNAMIAGYAQSGRF 245
>ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
[Glycine max]
Length = 736
Score = 277 bits (708), Expect = 3e-72
Identities = 134/267 (50%), Positives = 183/267 (68%), Gaps = 5/267 (1%)
Frame = +3
Query: 3 LELGKWIHAYIKRNDIEMG----ATLCSALIDMYAKCGCIKLSLEVFESMQCKDLV-WST 167
L+LGKW+HAYI +N G +L +++I MYAKCGC++++ +VF SM + L W+
Sbjct: 376 LDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNA 435
Query: 168 IIGGLSMNGHSKLALEYFERMIECGGVPDSITFIGVLSACSHAGLIEEGKHYFLLMTEVY 347
+I GL+MNGH++ AL FE MI G PD ITF+GVLSAC+ AG +E G YF M + Y
Sbjct: 436 MISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDY 495
Query: 348 GIPPTSEHCGCMVDLFARQGLLSEAKDFIDGISISSNGTAIWGALLGACSIYGNLELAEY 527
GI P +H GCM+DL AR G EAK + + + +G AIWG+LL AC I+G +E EY
Sbjct: 496 GISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDG-AIWGSLLNACRIHGQVEFGEY 554
Query: 528 AARHLLAINPTNSGAYVLLSNVYAKASRWSDVRKVRNMMKERGIDKIPGCSSIEVNGVVH 707
A L + P NSGAYVLLSN+YA A RW DV K+R + ++G+ K+PGC+SIE++GVVH
Sbjct: 555 VAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVH 614
Query: 708 EFFVGDFSHSQGEEIYMMLNRLEKMLQ 788
EF VGD H Q E I+ ML+ ++++L+
Sbjct: 615 EFLVGDKFHPQSENIFRMLDEVDRLLE 641
Score = 84.3 bits (207), Expect = 3e-14
Identities = 54/177 (30%), Positives = 92/177 (51%), Gaps = 4/177 (2%)
Frame = +3
Query: 3 LELGKWIHAYIKRNDIEMGATLCSALIDMYAKCGCIKLSLEVFESMQCKDLV-WSTIIGG 179
LELGKWI ++++ L +AL+DMY+KCG I + ++F+ M+ KD++ W+T+IGG
Sbjct: 275 LELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGG 334
Query: 180 LSMNGHSKLALEYFERMIECGGVPDSITFIGVLSACSHAGLIEEGK---HYFLLMTEVYG 350
+ AL FE M+ P+ +TF+ VL AC+ G ++ GK Y + G
Sbjct: 335 YCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTG 394
Query: 351 IPPTSEHCGCMVDLFARQGLLSEAKDFIDGISISSNGTAIWGALLGACSIYGNLELA 521
++ ++A+ G + A+ S+ S A W A++ ++ G+ E A
Sbjct: 395 NVNNVSLWTSIIVMYAKCGCVEVAEQVFR--SMGSRSLASWNAMISGLAMNGHAERA 449
Score = 62.0 bits (149), Expect = 2e-07
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 1/154 (0%)
Frame = +3
Query: 72 SALIDMYAKCGCIKLSLEVFESMQCKDLV-WSTIIGGLSMNGHSKLALEYFERMIECGGV 248
+ALI Y G + + +F+ + KD+V W+ +I G +G + AL F RM E
Sbjct: 197 TALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVS 256
Query: 249 PDSITFIGVLSACSHAGLIEEGKHYFLLMTEVYGIPPTSEHCGCMVDLFARQGLLSEAKD 428
P+ T + VLSAC H +E GK + G + +VD++++ G + A+
Sbjct: 257 PNQSTMVSVLSACGHLRSLELGK-WIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARK 315
Query: 429 FIDGISISSNGTAIWGALLGACSIYGNLELAEYA 530
DG + +W ++G Y +L L E A
Sbjct: 316 LFDG--MEDKDVILWNTMIGG---YCHLSLYEEA 344
>ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
[Cucumis sativus]
Length = 666
Score = 274 bits (701), Expect = 2e-71
Identities = 131/263 (49%), Positives = 186/263 (70%), Gaps = 1/263 (0%)
Frame = +3
Query: 3 LELGKWIHAYIKRNDIEMGATLCSALIDMYAKCGCIKLSLEVFESMQCKDL-VWSTIIGG 179
++ G+W+HAY+KRN I++ A L +AL+DMYAKCG + + EVFE M+ +++ W+ +IGG
Sbjct: 310 IDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGG 369
Query: 180 LSMNGHSKLALEYFERMIECGGVPDSITFIGVLSACSHAGLIEEGKHYFLLMTEVYGIPP 359
L+++G ++ ALE F ++ E P+ IT +GVL+AC+HAG +++G F M E YG+ P
Sbjct: 370 LAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDP 429
Query: 360 TSEHCGCMVDLFARQGLLSEAKDFIDGISISSNGTAIWGALLGACSIYGNLELAEYAARH 539
EH GCMVDL R GL SEA+D I+ + + N A+WGALLGAC I+GN +LAE +
Sbjct: 430 ELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNA-AVWGALLGACRIHGNFDLAERVGKI 488
Query: 540 LLAINPTNSGAYVLLSNVYAKASRWSDVRKVRNMMKERGIDKIPGCSSIEVNGVVHEFFV 719
LL + P NSG YVLLSN+YAK R+ DV K+R +MK+RGI +PG S +++NG VHEF +
Sbjct: 489 LLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKM 548
Query: 720 GDFSHSQGEEIYMMLNRLEKMLQ 788
GD SH Q +EIY L +++ LQ
Sbjct: 549 GDGSHPQMKEIYRKLKIIKERLQ 571
>ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
[Cucumis sativus]
Length = 666
Score = 273 bits (699), Expect = 3e-71
Identities = 131/263 (49%), Positives = 185/263 (70%), Gaps = 1/263 (0%)
Frame = +3
Query: 3 LELGKWIHAYIKRNDIEMGATLCSALIDMYAKCGCIKLSLEVFESMQCKDL-VWSTIIGG 179
++ G+W+HAY+KRN I++ A L +AL+DMYAKCG + + EVFE M+ +++ W+ +IGG
Sbjct: 310 IDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGG 369
Query: 180 LSMNGHSKLALEYFERMIECGGVPDSITFIGVLSACSHAGLIEEGKHYFLLMTEVYGIPP 359
L+++G ++ ALE F ++ E P+ IT +GVL+AC+HAG +++G F M E YG+ P
Sbjct: 370 LAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDP 429
Query: 360 TSEHCGCMVDLFARQGLLSEAKDFIDGISISSNGTAIWGALLGACSIYGNLELAEYAARH 539
EH GCMVDL R GL SEA+D I+ + + N A+WGALLGAC I+GN +LAE +
Sbjct: 430 ELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNA-AVWGALLGACRIHGNFDLAERVGKI 488
Query: 540 LLAINPTNSGAYVLLSNVYAKASRWSDVRKVRNMMKERGIDKIPGCSSIEVNGVVHEFFV 719
LL + P NSG YVLLSN+YAK R+ DV K+R +MK RGI +PG S +++NG VHEF +
Sbjct: 489 LLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKM 548
Query: 720 GDFSHSQGEEIYMMLNRLEKMLQ 788
GD SH Q +EIY L +++ LQ
Sbjct: 549 GDGSHPQMKEIYRKLKIIKERLQ 571
>ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein At1g31430-like
[Vitis vinifera]
Length = 662
Score = 273 bits (699), Expect = 3e-71
Identities = 137/264 (51%), Positives = 179/264 (67%), Gaps = 3/264 (1%)
Frame = +3
Query: 3 LELGKWIHAYIKRNDIEMGATLCSALIDMYAKCGCIKLSLEVFESMQCKDLV-WSTIIGG 179
LE GKWIH YI N I + A + +ALI+MYAKCG I+ SLE+F ++ KD W++II G
Sbjct: 381 LEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICG 440
Query: 180 LSMNGHSKLALEYFERMIECGGVPDSITFIGVLSACSHAGLIEEGKHYFLLMTEVYGIPP 359
L+MNG + ALE F M++ G PD ITFIGVLSACSH GL+EEG+ +F MT VY I P
Sbjct: 441 LAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEP 500
Query: 360 TSEHCGCMVDLFARQGLLSEAKDFIDGISISSNGTAI--WGALLGACSIYGNLELAEYAA 533
EH GC++DL R G L EA++ I+ +N + +GALL AC +GN+E+ E A
Sbjct: 501 KLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVA 560
Query: 534 RHLLAINPTNSGAYVLLSNVYAKASRWSDVRKVRNMMKERGIDKIPGCSSIEVNGVVHEF 713
+ L+ I +S + LL+N+YA A RW DV KVR MK+ G+ K+PGCSS+EVNG+VHEF
Sbjct: 561 KRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEF 620
Query: 714 FVGDFSHSQGEEIYMMLNRLEKML 785
VGD SH + EIY ML+ + K L
Sbjct: 621 LVGDASHPEMREIYSMLDSIAKPL 644
Score = 72.0 bits (175), Expect = 2e-10
Identities = 56/218 (25%), Positives = 107/218 (49%), Gaps = 4/218 (1%)
Frame = +3
Query: 12 GKWIHAYIKRNDIEMGATLCSALIDMYAKCGCIKLSLEVFESMQCKDLV-WSTIIGGLSM 188
G+ ++ ++ ++ +E +C++L+DMYA+ G ++ +VFE M +D+V W+ +I G
Sbjct: 151 GEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVK 210
Query: 189 NGHSKLALEYFERMIECGGV-PDSITFIGVLSACSHAGLIEEGKHYFLLMTEVYGIPPTS 365
+ A++ F RM + + P+ T + LSAC ++E GK + E G T
Sbjct: 211 CRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQLGF--TI 268
Query: 366 EHCGCMVDLFARQGLLSEAKDFIDGISISSNGTAIWGALLGACSIYGNLELAEYAARHLL 545
+ +VD++ + G LS A++ + + I + W +++ G L+ AR L
Sbjct: 269 KIGNALVDMYCKCGHLSIAREIFNDMPIKT--VICWTSMVSGYVNCGQLD----EARELF 322
Query: 546 AINPTNSGA-YVLLSNVYAKASRWSD-VRKVRNMMKER 653
+P + + N Y + +R+ D V R M +R
Sbjct: 323 ERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKR 360