BLASTX nr result

ID: Dioscorea21_contig00024861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024861
         (966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001145801.1| hypothetical protein [Zea mays] gi|219884481...   215   1e-53
ref|XP_002455126.1| hypothetical protein SORBIDRAFT_03g004760 [S...   213   4e-53
ref|NP_001042118.1| Os01g0166800 [Oryza sativa Japonica Group] g...   211   2e-52
ref|XP_002274437.1| PREDICTED: mini-chromosome maintenance compl...   210   4e-52
ref|XP_003569157.1| PREDICTED: mini-chromosome maintenance compl...   210   5e-52

>ref|NP_001145801.1| hypothetical protein [Zea mays] gi|219884481|gb|ACL52615.1| unknown
           [Zea mays] gi|414876178|tpg|DAA53309.1| TPA:
           hypothetical protein ZEAMMB73_024181 [Zea mays]
          Length = 595

 Score =  215 bits (548), Expect = 1e-53
 Identities = 119/230 (51%), Positives = 151/230 (65%), Gaps = 12/230 (5%)
 Frame = +2

Query: 44  GKDWGALDLFRDFLLEKGGLSQVPILDASSRLWIQPNSLVRFRGMVQDMLGKELYIGAFQ 223
           GKDWGA DLFR FL E+ GL +VP+LD+S+   I+PN+LVR+RGMVQDMLG E YIGAF+
Sbjct: 42  GKDWGAGDLFRSFLFEQDGLGKVPVLDSSNLGLIKPNTLVRYRGMVQDMLGNEYYIGAFK 101

Query: 224 DGSNWRTNKYSDGALFPMPAGRQSAYESNLWERLLLHCVPVPGHNSWAMHSTP-PQVFRN 400
           DGS WRTNKY+D + + MP       +S+LWER L HCVP PG NSW + S+P P V R 
Sbjct: 102 DGSTWRTNKYTDFSPYSMP----HPCDSHLWERHLFHCVPAPGQNSWTLESSPGPDVCR- 156

Query: 401 VMDNSMY-EHGEKRQRDEEID----ENNEHGGSPSSKKQKEGEHPCQLNHSSQGSLVQGS 565
            M N +  E  EKR+RD + D      N HG S   KK KEG+    ++ SS  + V G+
Sbjct: 157 -MSNCLAPELREKRKRDGDDDAMDVSENGHGNSSFCKKPKEGD----VHVSSSSTEVAGT 211

Query: 566 FSEPRN------GASLSCVIKMYDTPECDLKLNDVFEFIAIYTFDPEVVA 697
             E         G+S SC++K+YD P+  +KLNDV EFI +YTFDPE+ A
Sbjct: 212 IPEMNGGDHHIPGSSFSCLVKIYDMPDSQVKLNDVIEFIGVYTFDPELAA 261


>ref|XP_002455126.1| hypothetical protein SORBIDRAFT_03g004760 [Sorghum bicolor]
           gi|241927101|gb|EES00246.1| hypothetical protein
           SORBIDRAFT_03g004760 [Sorghum bicolor]
          Length = 596

 Score =  213 bits (543), Expect = 4e-53
 Identities = 115/229 (50%), Positives = 146/229 (63%), Gaps = 11/229 (4%)
 Frame = +2

Query: 44  GKDWGALDLFRDFLLEKGGLSQVPILDASSRLWIQPNSLVRFRGMVQDMLGKELYIGAFQ 223
           GKDWGA DLFR FL E+ GL +VP+LDAS+   I+PN+LVR+RGMVQDMLG E YIGAF+
Sbjct: 42  GKDWGAGDLFRSFLFEQDGLGKVPVLDASNLGLIKPNTLVRYRGMVQDMLGNEYYIGAFK 101

Query: 224 DGSNWRTNKYSDGALFPMPAGRQSAYESNLWERLLLHCVPVPGHNSWAMHSTPPQVFRNV 403
           DGS WRTNK++D + F MP       +S+LWER L HCVP PG NSW + S+P    R +
Sbjct: 102 DGSTWRTNKFTDVSPFSMP----HPCDSHLWERHLFHCVPAPGQNSWTLESSPGPDVRRM 157

Query: 404 MDNSMYEHGEKRQRD-----EEIDENNEHGGSPSSKKQKEGEHPCQLNHSSQGSLVQGSF 568
            +    E  EKR+RD      ++ EN     S   KK KEG+     + SS  + V G+ 
Sbjct: 158 TNCLAPELREKRKRDGDDDTMDVSENGHRESSSFCKKPKEGD----AHVSSSSTEVAGTV 213

Query: 569 SEPRN------GASLSCVIKMYDTPECDLKLNDVFEFIAIYTFDPEVVA 697
            E         G+S SC++K+YD PE  +KLNDV EFI +YTFDPE+ A
Sbjct: 214 PEMNGGDHHIPGSSFSCLVKIYDMPESQVKLNDVIEFIGVYTFDPELAA 262


>ref|NP_001042118.1| Os01g0166800 [Oryza sativa Japonica Group]
           gi|55296863|dbj|BAD68300.1| unknown protein [Oryza
           sativa Japonica Group] gi|113531649|dbj|BAF04032.1|
           Os01g0166800 [Oryza sativa Japonica Group]
           gi|215707176|dbj|BAG93636.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215708827|dbj|BAG94096.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 597

 Score =  211 bits (538), Expect = 2e-52
 Identities = 111/233 (47%), Positives = 148/233 (63%), Gaps = 15/233 (6%)
 Frame = +2

Query: 44  GKDWGALDLFRDFLLEKGGLSQVPILDASSRLWIQPNSLVRFRGMVQDMLGKELYIGAFQ 223
           GKDWGA ++FR FL E+GGL +VP+LD S+   I+PN+LVRFRGMVQDMLG E Y+GAF+
Sbjct: 38  GKDWGATEVFRSFLFEQGGLDKVPVLDESNLGLIKPNTLVRFRGMVQDMLGNEFYVGAFK 97

Query: 224 DGSNWRTNKYSDGALFPMPAGRQSAYESNLWERLLLHCVPVPGHNSWAMHSTPPQVFRNV 403
           DGS WRTNK+SD + F MP       +S+LWER L HCVPVPG NSW   S+P    R +
Sbjct: 98  DGSTWRTNKFSDSSPFSMP----HPCDSHLWERHLFHCVPVPGQNSWTRESSPGPDLRRI 153

Query: 404 MDNSMYEHGEKRQR---DEEIDENNEHGGSPSSKKQKEGEHPCQLNHSSQGSLVQGSFSE 574
                 E  EKR+R   ++ +D +    G  SS  +K  +   ++++SS    V+ S +E
Sbjct: 154 ASCFTSEQREKRKRGADNDAMDVSESGSGETSSSSKKTKDDGVKISNSS----VEMSMNE 209

Query: 575 PRN------------GASLSCVIKMYDTPECDLKLNDVFEFIAIYTFDPEVVA 697
             +            G+S SC++K+YD PE  +KLNDV EFI +YTFDPE+ A
Sbjct: 210 EHHVPEMNGGDHHIPGSSFSCLVKVYDMPESQVKLNDVSEFIGVYTFDPELAA 262


>ref|XP_002274437.1| PREDICTED: mini-chromosome maintenance complex-binding protein
           [Vitis vinifera]
          Length = 596

 Score =  210 bits (535), Expect = 4e-52
 Identities = 109/229 (47%), Positives = 149/229 (65%), Gaps = 12/229 (5%)
 Frame = +2

Query: 44  GKDWGALDLFRDFLLEKGGLSQVPILDASSRLWIQPNSLVRFRGMVQDMLGKELYIGAFQ 223
           GKDWG  DLFR FL + GGLSQVP+L++++   +QPN+LVRFRGM+QDMLG ELY+G ++
Sbjct: 39  GKDWGVADLFRQFLFDNGGLSQVPVLNSTNFKRVQPNTLVRFRGMIQDMLGNELYVGVYK 98

Query: 224 DGSNWRTNKYSDGALFPMPAGRQSAYESNLWERLLLHCVPVPGHNSWAMHSTPPQVFRNV 403
           +G NWRTNK+ D + FPM     S  +  +WER LL+CVPVPG NSW   S+   +  N 
Sbjct: 99  EGPNWRTNKFMDVSQFPM----GSRPDMRVWERRLLYCVPVPGQNSWVEPSSEAVI--NC 152

Query: 404 MDNSMYEHGEKRQRDEEID--------ENNEHGGSPSSKKQKEGEHPCQLNHS----SQG 547
             N   +  EKRQRD+            ++E  GS S+KK +EGE P + + +    S+ 
Sbjct: 153 YRNGTSQQREKRQRDDNTATDPMELHVSDDEFQGSSSNKKLREGELPFESSKAQDFVSES 212

Query: 548 SLVQGSFSEPRNGASLSCVIKMYDTPECDLKLNDVFEFIAIYTFDPEVV 694
           +    S     +  SL C++K+YD+PE DLKLNDVFEF+ ++TFDPE+V
Sbjct: 213 ACSSVSMVPTFDKDSLPCLVKIYDSPESDLKLNDVFEFVGVFTFDPELV 261


>ref|XP_003569157.1| PREDICTED: mini-chromosome maintenance complex-binding protein-like
           [Brachypodium distachyon]
          Length = 600

 Score =  210 bits (534), Expect = 5e-52
 Identities = 115/240 (47%), Positives = 145/240 (60%), Gaps = 23/240 (9%)
 Frame = +2

Query: 47  KDWGALDLFRDFLLEKGGLSQVPILDASSRLWIQPNSLVRFRGMVQDMLGKELYIGAFQD 226
           KDWGA ++FR FL ++GG+ +VP+LDAS+   I+PN+LVRFRGMVQDMLG E Y GAF+D
Sbjct: 43  KDWGATEVFRSFLFDQGGIDKVPVLDASNLGLIKPNTLVRFRGMVQDMLGSEFYAGAFKD 102

Query: 227 GSNWRTNKYSDGALFPMPAGRQSAYESNLWERLLLHCVPVPGHNSWAMHSTPPQVFRNVM 406
           GS WRTNK++D + F MP       +S+LWER LLHCVPVPG NSW M S+P    R + 
Sbjct: 103 GSTWRTNKFTDFSPFTMP----HPCDSHLWERHLLHCVPVPGQNSWTMESSPGPDLRQMS 158

Query: 407 DNSMYEHGEKRQRD-----EEIDENNEHGGSPSSKKQKEGEHPCQLNHSSQGSLVQGSFS 571
           + S  E  +KR+RD      ++ EN    GS  SKK KE               VQGS S
Sbjct: 159 NCSTSEQRDKRKRDGDDDAMDVSENGNGEGSSFSKKPKEDG-------------VQGSSS 205

Query: 572 EPR------------------NGASLSCVIKMYDTPECDLKLNDVFEFIAIYTFDPEVVA 697
            P                    G+  SC++K+YD PE  +KLNDV EFI +YTFDPE+ A
Sbjct: 206 SPEMPVSEDRVPEMNGDDHHIPGSFFSCLVKVYDMPESQVKLNDVAEFIGVYTFDPELAA 265


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