BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024847
         (1233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   275   3e-89
emb|CBI37517.3| unnamed protein product [Vitis vinifera]              275   3e-89
ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   256   1e-84
gb|EEC84165.1| hypothetical protein OsI_30540 [Oryza sativa Indi...   229   2e-72
ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group] g...   223   5e-72

>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  275 bits (702), Expect(2) = 3e-89
 Identities = 138/258 (53%), Positives = 169/258 (65%), Gaps = 8/258 (3%)
 Frame = -2

Query: 1037 QCRNVVWLPGAISEAAITSQICPSCSPGPVFLIQFKFRRLEIPPNYDIDHLGCIGGCDAT 858
            QCRNVVWLPG+ISEAAIT+  C  C+PGPV+ IQFKFRRLEIPPNY+IDHLGC+ GCD  
Sbjct: 661  QCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNYNIDHLGCVCGCDEI 720

Query: 857  LRELTEICGTGSRNLPSMTARAQRAAYPSSDSQSGHRRQRSCAHCRQTSHASNDCPSLTS 678
            LR+LTEICGTGSR    ++AR + +   S+++Q  + RQ +C HC QT H+SNDCPS   
Sbjct: 721  LRQLTEICGTGSR----ISARGRGSNASSTNAQRSNTRQTACIHCSQTGHSSNDCPSRVP 776

Query: 677  HARSVHSRRSQNPRNDPGQISCH-CGEPCTLRTANTENNRGRKFYTCQSRDCDFFLWEDN 501
             +R+  S R+  P  +   I C+ CG PC LRTANTENNRGRKFY+CQS++C+FF+WED+
Sbjct: 777  RSRNSQSHRTNMPSGE-SSIPCNVCGTPCILRTANTENNRGRKFYSCQSQECNFFVWEDS 835

Query: 500  ANND------XXXXXXXXXXXXXXXXXXXXXXXXXXXXRATDIDGVAFVSATGERVSG-R 342
             N+                                            FVSATG+ VSG R
Sbjct: 836  LNSSSGGRSAQPATARSSASNPSRRGGRGRGDRGRGRQSGARTSDTTFVSATGDPVSGRR 895

Query: 341  CYVCGDPSHFANVCPNRG 288
            C+VCGDPSHFANVCPNRG
Sbjct: 896  CFVCGDPSHFANVCPNRG 913



 Score = 82.0 bits (201), Expect(2) = 3e-89
 Identities = 39/63 (61%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
 Frame = -3

Query: 1231 ARQNKAKLLEAMGIFFERSNRSGGDTGNAV-EIVRPCGVCRESNMALKRNSNGHFMVGCL 1055
            AR NK KLLEAM +FFERSNRS GD  + V ++VR C +C+ES+M L+R  +G+FMVGCL
Sbjct: 598  ARLNKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRRKPDGNFMVGCL 657

Query: 1054 SYP 1046
             YP
Sbjct: 658  GYP 660


>emb|CBI37517.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  275 bits (702), Expect(2) = 3e-89
 Identities = 138/258 (53%), Positives = 169/258 (65%), Gaps = 8/258 (3%)
 Frame = -2

Query: 1037 QCRNVVWLPGAISEAAITSQICPSCSPGPVFLIQFKFRRLEIPPNYDIDHLGCIGGCDAT 858
            QCRNVVWLPG+ISEAAIT+  C  C+PGPV+ IQFKFRRLEIPPNY+IDHLGC+ GCD  
Sbjct: 336  QCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNYNIDHLGCVCGCDEI 395

Query: 857  LRELTEICGTGSRNLPSMTARAQRAAYPSSDSQSGHRRQRSCAHCRQTSHASNDCPSLTS 678
            LR+LTEICGTGSR    ++AR + +   S+++Q  + RQ +C HC QT H+SNDCPS   
Sbjct: 396  LRQLTEICGTGSR----ISARGRGSNASSTNAQRSNTRQTACIHCSQTGHSSNDCPSRVP 451

Query: 677  HARSVHSRRSQNPRNDPGQISCH-CGEPCTLRTANTENNRGRKFYTCQSRDCDFFLWEDN 501
             +R+  S R+  P  +   I C+ CG PC LRTANTENNRGRKFY+CQS++C+FF+WED+
Sbjct: 452  RSRNSQSHRTNMPSGE-SSIPCNVCGTPCILRTANTENNRGRKFYSCQSQECNFFVWEDS 510

Query: 500  ANND------XXXXXXXXXXXXXXXXXXXXXXXXXXXXRATDIDGVAFVSATGERVSG-R 342
             N+                                            FVSATG+ VSG R
Sbjct: 511  LNSSSGGRSAQPATARSSASNPSRRGGRGRGDRGRGRQSGARTSDTTFVSATGDPVSGRR 570

Query: 341  CYVCGDPSHFANVCPNRG 288
            C+VCGDPSHFANVCPNRG
Sbjct: 571  CFVCGDPSHFANVCPNRG 588



 Score = 82.0 bits (201), Expect(2) = 3e-89
 Identities = 39/63 (61%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
 Frame = -3

Query: 1231 ARQNKAKLLEAMGIFFERSNRSGGDTGNAV-EIVRPCGVCRESNMALKRNSNGHFMVGCL 1055
            AR NK KLLEAM +FFERSNRS GD  + V ++VR C +C+ES+M L+R  +G+FMVGCL
Sbjct: 273  ARLNKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRRKPDGNFMVGCL 332

Query: 1054 SYP 1046
             YP
Sbjct: 333  GYP 335


>ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
          Length = 925

 Score =  256 bits (654), Expect(2) = 1e-84
 Identities = 137/270 (50%), Positives = 167/270 (61%), Gaps = 18/270 (6%)
 Frame = -2

Query: 1043 FLQCRNVVWLPGAISEAAITSQICPSCSPGPVFLIQFKFRRLEIPPNYDIDHLGCIGGCD 864
            F QCRNVVWLPG+I+EA +TS  C  C+PGPV+LIQFKFR+LEIPPNY+ +HLGC+GGCD
Sbjct: 666  FPQCRNVVWLPGSIAEATVTSDRCTLCTPGPVYLIQFKFRQLEIPPNYNANHLGCVGGCD 725

Query: 863  ATLRELTEICGTGSRNLPSMTARAQRAAYPSSDSQSGHRRQRSCAHCRQTSHASNDCPSL 684
              LR+LTEICGTGSR    ++AR +  +  SS+ Q  +  Q  C  C+Q  H+SNDCPS 
Sbjct: 726  DILRQLTEICGTGSR----VSARGRGTS--SSNVQRDNPGQSVCIFCQQVGHSSNDCPS- 778

Query: 683  TSHARSVHSRRSQNPRNDPGQISC-HCGEPCTLRTANTENNRGRKFYTCQSRDCDFFLWE 507
                +SV SR +Q  ++    +SC  CG PC LRTANT NNRGRKFY CQS++C+FF+WE
Sbjct: 779  ----QSVGSRSAQRRQSGESSVSCSSCGSPCVLRTANTANNRGRKFYKCQSQECNFFVWE 834

Query: 506  DNANND--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXRATDID--------GVAF 375
            DN +N                                     R  D D           F
Sbjct: 835  DNVDNGNGGNSVQRSNVRSSGSAPSNLNPGQNTGRGRGRGRGRGRDRDRDRGQGQIAATF 894

Query: 374  VSATGERVSG-RCYVCGDPSHFANVCPNRG 288
            VSATGE +S  RC+VCGDPSHFANVCPNRG
Sbjct: 895  VSATGEPISDRRCFVCGDPSHFANVCPNRG 924



 Score = 84.7 bits (208), Expect(2) = 1e-84
 Identities = 40/63 (63%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
 Frame = -3

Query: 1231 ARQNKAKLLEAMGIFFERSNRSGGDTGNAV-EIVRPCGVCRESNMALKRNSNGHFMVGCL 1055
            AR NK KLLEAM +FFERSN SGGD   AV E+V+ CG+C++S+M LKRN +G++MVGCL
Sbjct: 605  ARVNKQKLLEAMEVFFERSNGSGGDENRAVGEVVQLCGLCQDSDMVLKRNRDGNYMVGCL 664

Query: 1054 SYP 1046
             +P
Sbjct: 665  GFP 667


>gb|EEC84165.1| hypothetical protein OsI_30540 [Oryza sativa Indica Group]
          Length = 897

 Score =  229 bits (584), Expect(2) = 2e-72
 Identities = 119/264 (45%), Positives = 148/264 (56%), Gaps = 11/264 (4%)
 Frame = -2

Query: 1043 FLQCRNVVWLPGAISEAAITSQICPSCSPGPVFLIQFKFRRLEIPPNYDIDHLGCIGGCD 864
            F QCRN VWLP ++SEAA+T Q+CP+C+PGPV+ IQFKFRR +IPPN+D+DHLGCIGGCD
Sbjct: 637  FPQCRNAVWLPRSLSEAAVTDQVCPTCAPGPVYKIQFKFRRRDIPPNFDVDHLGCIGGCD 696

Query: 863  ATLRELTEICGTGSRNLPSMTARAQRAAYPSSDSQSGHRRQRSCAHCRQTSHASNDCPSL 684
              L+EL EI   GS +  +  AR       +S  + G  RQ            +N    +
Sbjct: 697  DILKELMEISRFGSHSQTATPARNPNQT--ASGVRQGSSRQDLHTSFHPAGQFTNGQTPV 754

Query: 683  TSHARSVHSRRSQNPRNDPGQISC-HCGEPCTLRTANTENNRGRKFYTCQSRDCDFFLWE 507
              + +   S  +Q+  N  GQ+ C  CGEPC LRTANTE NRGRKFY CQ   C FF WE
Sbjct: 755  V-NPQGFRSTHTQSSGNASGQVHCTSCGEPCVLRTANTEANRGRKFYKCQDPSCGFFAWE 813

Query: 506  DNANNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAT----------DIDGVAFVSATGE 357
            D+  N                               T          + DG+ FV+ATGE
Sbjct: 814  DDVENSAPRGRGGRGRRGRSSSRQSSESASAGRRGGTQGRGRRGRGRNADGMMFVAATGE 873

Query: 356  RVSGRCYVCGDPSHFANVCPNRGR 285
             V G C++CGDP+HFANVCPNRGR
Sbjct: 874  PVHGSCFICGDPTHFANVCPNRGR 897



 Score = 70.9 bits (172), Expect(2) = 2e-72
 Identities = 35/62 (56%), Positives = 40/62 (64%)
 Frame = -3

Query: 1231 ARQNKAKLLEAMGIFFERSNRSGGDTGNAVEIVRPCGVCRESNMALKRNSNGHFMVGCLS 1052
            AR NK KL +AMG FF RS+R   +T N VE VRPC  C ES M LK+   G FMVGC  
Sbjct: 578  ARANKVKLFDAMGTFFARSSRPVNETQN-VETVRPCAACNESEMFLKQRPTGEFMVGCRG 636

Query: 1051 YP 1046
            +P
Sbjct: 637  FP 638


>ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group]
            gi|255674230|dbj|BAH92006.1| Os03g0165000 [Oryza sativa
            Japonica Group]
          Length = 928

 Score =  223 bits (569), Expect(2) = 5e-72
 Identities = 121/271 (44%), Positives = 152/271 (56%), Gaps = 18/271 (6%)
 Frame = -2

Query: 1043 FLQCRNVVWLPGAISEAAITSQICPSCSPGPVFLIQFKFRRLEIPPNYDIDHLGCIGGCD 864
            F QCRNVVWLP ++S AA+T Q+CP+C+PGPV+ IQFKFRR +IPPN+D+DHLGCIGGCD
Sbjct: 668  FPQCRNVVWLPRSLSGAAVTDQVCPTCAPGPVYKIQFKFRRRDIPPNFDVDHLGCIGGCD 727

Query: 863  ATLRELTEICGTGSRNLPSMTARAQRAAYPSSDSQSGHRRQRSCAHCRQTSHAS------ 702
              L+EL E+   GS +  +  AR Q      S + SG R+  S    RQ  H S      
Sbjct: 728  DILKELMELSRFGSHSQTATPARNQ------SQTASGVRQGSS----RQDLHTSFHPAVQ 777

Query: 701  -NDCPSLTSHARSVHSRRSQNPRNDPGQISC-HCGEPCTLRTANTENNRGRKFYTCQSRD 528
              +  +   + +   S  +Q+  N  GQ+ C  C EPC LRTANTE NRGRKFY CQ+  
Sbjct: 778  FTNGQTPVVNPQGFRSTHTQSSGNASGQVQCTSCREPCVLRTANTEANRGRKFYKCQNLA 837

Query: 527  CDFFLWEDNANNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAT----------DIDGVA 378
            C FF WED+  N                               T          + DG+ 
Sbjct: 838  CGFFAWEDDVENSAPRGRGGRGRGGRSSSRQSSASASAGRRGGTQGRGRRGRGRNADGMM 897

Query: 377  FVSATGERVSGRCYVCGDPSHFANVCPNRGR 285
            FV+ATGE V G C++CGDP+HFANVCPN GR
Sbjct: 898  FVAATGEPVYGSCFICGDPTHFANVCPNLGR 928



 Score = 75.5 bits (184), Expect(2) = 5e-72
 Identities = 34/62 (54%), Positives = 41/62 (66%)
 Frame = -3

Query: 1231 ARQNKAKLLEAMGIFFERSNRSGGDTGNAVEIVRPCGVCRESNMALKRNSNGHFMVGCLS 1052
            AR NK KL +AMG FF RS+R   +T N++E VRPC  C ES M LK+   G FMVGC  
Sbjct: 608  ARANKVKLFDAMGTFFARSSRPVNETQNSIETVRPCAACNESEMFLKQRPTGEFMVGCRG 667

Query: 1051 YP 1046
            +P
Sbjct: 668  FP 669