BLASTX nr result

ID: Dioscorea21_contig00024828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024828
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW75373.1| hypothetical protein ZEAMMB73_715964 [Zea mays]         86   3e-15
ref|NP_001183389.1| uncharacterized protein LOC100501804 [Zea ma...    86   3e-15
ref|NP_001056686.1| Os06g0130000 [Oryza sativa Japonica Group] g...    85   5e-15
gb|AFW86040.1| hypothetical protein ZEAMMB73_854699 [Zea mays]         85   7e-15
ref|NP_001141317.1| uncharacterized protein LOC100273408 [Zea ma...    85   7e-15

>gb|AFW75373.1| hypothetical protein ZEAMMB73_715964 [Zea mays]
          Length = 132

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 48/81 (59%), Positives = 55/81 (67%)
 Frame = -2

Query: 248 LSFGQGGDPQLMDXXXXXXXXAGPSVVSERVVNKLKGDFHLAKEEIDKAIRAEEWGLTND 69
           L F  GG+   MD        A  +VV ERV  KL+G F LAKEE+DKA+RAEEWGL +D
Sbjct: 14  LLFSSGGETAPMDAAGSAPSPA--AVVRERVAVKLRGYFDLAKEEMDKAVRAEEWGLPDD 71

Query: 68  AIAHYKNTHRVMLEANAARVP 6
           A AHY+N  RVMLEA AARVP
Sbjct: 72  ATAHYRNAMRVMLEAQAARVP 92


>ref|NP_001183389.1| uncharacterized protein LOC100501804 [Zea mays]
           gi|238011174|gb|ACR36622.1| unknown [Zea mays]
           gi|413942725|gb|AFW75374.1| hypothetical protein
           ZEAMMB73_715964 [Zea mays] gi|413942726|gb|AFW75375.1|
           hypothetical protein ZEAMMB73_715964 [Zea mays]
           gi|413942727|gb|AFW75376.1| hypothetical protein
           ZEAMMB73_715964 [Zea mays]
          Length = 118

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 48/81 (59%), Positives = 55/81 (67%)
 Frame = -2

Query: 248 LSFGQGGDPQLMDXXXXXXXXAGPSVVSERVVNKLKGDFHLAKEEIDKAIRAEEWGLTND 69
           L F  GG+   MD        A  +VV ERV  KL+G F LAKEE+DKA+RAEEWGL +D
Sbjct: 14  LLFSSGGETAPMDAAGSAPSPA--AVVRERVAVKLRGYFDLAKEEMDKAVRAEEWGLPDD 71

Query: 68  AIAHYKNTHRVMLEANAARVP 6
           A AHY+N  RVMLEA AARVP
Sbjct: 72  ATAHYRNAMRVMLEAQAARVP 92


>ref|NP_001056686.1| Os06g0130000 [Oryza sativa Japonica Group]
           gi|52075628|dbj|BAD44799.1| putative spastin protein
           orthologue [Oryza sativa Japonica Group]
           gi|113594726|dbj|BAF18600.1| Os06g0130000 [Oryza sativa
           Japonica Group] gi|124361604|gb|ABN09244.1| putative
           spastin-like protein [Oryza sativa Japonica Group]
           gi|215687196|dbj|BAG91761.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215767388|dbj|BAG99616.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218197493|gb|EEC79920.1| hypothetical protein
           OsI_21482 [Oryza sativa Indica Group]
          Length = 487

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/57 (73%), Positives = 47/57 (82%)
 Frame = -2

Query: 176 SVVSERVVNKLKGDFHLAKEEIDKAIRAEEWGLTNDAIAHYKNTHRVMLEANAARVP 6
           +VV ERV  KL+G F LAKEEIDKA+RAEEWGL +DA AHY+N  RVMLEA AARVP
Sbjct: 36  AVVGERVAVKLRGYFELAKEEIDKAVRAEEWGLPDDAAAHYRNALRVMLEAKAARVP 92


>gb|AFW86040.1| hypothetical protein ZEAMMB73_854699 [Zea mays]
          Length = 396

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 48/81 (59%), Positives = 54/81 (66%)
 Frame = -2

Query: 248 LSFGQGGDPQLMDXXXXXXXXAGPSVVSERVVNKLKGDFHLAKEEIDKAIRAEEWGLTND 69
           L F  GG    MD        A  +VV ERV  KL+G F LAKEEIDKA+RAEEWGL ++
Sbjct: 14  LLFSSGGGAVSMDAAGAAPSPA--AVVGERVAVKLRGYFDLAKEEIDKAVRAEEWGLPDE 71

Query: 68  AIAHYKNTHRVMLEANAARVP 6
           A AHY+N  RVMLEA AARVP
Sbjct: 72  ATAHYRNAMRVMLEAKAARVP 92


>ref|NP_001141317.1| uncharacterized protein LOC100273408 [Zea mays]
           gi|194703948|gb|ACF86058.1| unknown [Zea mays]
           gi|413953392|gb|AFW86041.1| hypothetical protein
           ZEAMMB73_854699 [Zea mays]
          Length = 490

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 48/81 (59%), Positives = 54/81 (66%)
 Frame = -2

Query: 248 LSFGQGGDPQLMDXXXXXXXXAGPSVVSERVVNKLKGDFHLAKEEIDKAIRAEEWGLTND 69
           L F  GG    MD        A  +VV ERV  KL+G F LAKEEIDKA+RAEEWGL ++
Sbjct: 14  LLFSSGGGAVSMDAAGAAPSPA--AVVGERVAVKLRGYFDLAKEEIDKAVRAEEWGLPDE 71

Query: 68  AIAHYKNTHRVMLEANAARVP 6
           A AHY+N  RVMLEA AARVP
Sbjct: 72  ATAHYRNAMRVMLEAKAARVP 92


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