BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024800
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                             176   2e-42
gb|AFB73912.1| polyprotein [Citrus sinensis]                          170   1e-40
gb|AFB73911.1| polyprotein [Citrus sinensis]                          163   1e-38
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              158   5e-37
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              157   6e-37

>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score =  176 bits (446), Expect = 2e-42
 Identities = 85/112 (75%), Positives = 98/112 (87%)
 Frame = -1

Query: 338 MTSRRDWFRHYEPISGGSVYSCNDQALKIVGMGTIKLKMYDGTVRTIQEVRHVEGLKKNL 159
           MTSR++WF HYEPISGGSVYSC+D AL+I+G+GTIKLKMYDGTV+T+Q+VRHV+GLKKNL
Sbjct: 292 MTSRKEWFHHYEPISGGSVYSCDDHALEIIGIGTIKLKMYDGTVQTVQDVRHVKGLKKNL 351

Query: 158 LSIGQLDDLGCKIEVQNKTMKIIRGALVCMKGEKIAANLYMLKGETLQEGEA 3
           LS G LD+   +IE Q   MKI +GALV MKGEKIAANLYMLKGETLQE EA
Sbjct: 352 LSYGILDNSATQIETQKGVMKIFQGALVVMKGEKIAANLYMLKGETLQEAEA 403


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/112 (72%), Positives = 95/112 (84%)
 Frame = -1

Query: 338 MTSRRDWFRHYEPISGGSVYSCNDQALKIVGMGTIKLKMYDGTVRTIQEVRHVEGLKKNL 159
           MTSRR+WF  YEPISGGSVY  ND AL+I G+GTIK+KM+DGT+RTI+EVRHV GLKKNL
Sbjct: 302 MTSRREWFHTYEPISGGSVYMGNDHALEIAGIGTIKIKMFDGTIRTIEEVRHVNGLKKNL 361

Query: 158 LSIGQLDDLGCKIEVQNKTMKIIRGALVCMKGEKIAANLYMLKGETLQEGEA 3
           LS+GQ+D  GCK  V+N  MKI++GALV MK EKI ANL+MLKGETLQE +A
Sbjct: 362 LSLGQMDSHGCKTHVENGIMKIVKGALVLMKAEKICANLFMLKGETLQEADA 413


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  163 bits (413), Expect = 1e-38
 Identities = 80/112 (71%), Positives = 93/112 (83%)
 Frame = -1

Query: 338 MTSRRDWFRHYEPISGGSVYSCNDQALKIVGMGTIKLKMYDGTVRTIQEVRHVEGLKKNL 159
           MTSRR+WF  YEPISGGSVY  ND AL+I G+GTIK+KM+DGT+RTI EVRHV GLKKNL
Sbjct: 302 MTSRREWFHTYEPISGGSVYMGNDHALEIAGIGTIKIKMFDGTIRTIGEVRHVNGLKKNL 361

Query: 158 LSIGQLDDLGCKIEVQNKTMKIIRGALVCMKGEKIAANLYMLKGETLQEGEA 3
           LS+GQ+D  G K  V+N  MKI++GALV MK EKI ANL+MLKGETLQE +A
Sbjct: 362 LSLGQMDSHGYKTHVENGIMKIVKGALVLMKVEKIGANLFMLKGETLQEADA 413


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  158 bits (399), Expect = 5e-37
 Identities = 76/112 (67%), Positives = 91/112 (81%)
 Frame = -1

Query: 338 MTSRRDWFRHYEPISGGSVYSCNDQALKIVGMGTIKLKMYDGTVRTIQEVRHVEGLKKNL 159
           MT  RDWF  YEPIS GSVY  ND AL+I G+GTI+LKM+DGTVR IQ VRHV+GLKKNL
Sbjct: 301 MTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGLKKNL 360

Query: 158 LSIGQLDDLGCKIEVQNKTMKIIRGALVCMKGEKIAANLYMLKGETLQEGEA 3
           LS+GQLDDLGCKI  ++  +K+++G LV MK EKI +NLYML G+TLQE +A
Sbjct: 361 LSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYMLLGDTLQEADA 412


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  157 bits (398), Expect = 6e-37
 Identities = 76/112 (67%), Positives = 91/112 (81%)
 Frame = -1

Query: 338 MTSRRDWFRHYEPISGGSVYSCNDQALKIVGMGTIKLKMYDGTVRTIQEVRHVEGLKKNL 159
           MT  RDWF  YEPIS GSVY  ND AL+I G+GTI+LKM+DGTVR IQ VRHV+GLKKNL
Sbjct: 301 MTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGLKKNL 360

Query: 158 LSIGQLDDLGCKIEVQNKTMKIIRGALVCMKGEKIAANLYMLKGETLQEGEA 3
           LS+GQLDDLGCKI  ++  +K+++G LV MK EKI +NLYML G+TLQE +A
Sbjct: 361 LSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYMLLGDTLQEADA 412