BLASTX nr result

ID: Dioscorea21_contig00024778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024778
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003564787.1| PREDICTED: DNA replication complex GINS prot...   154   7e-36
ref|XP_002279153.1| PREDICTED: DNA replication complex GINS prot...   154   7e-36
dbj|BAK06665.1| predicted protein [Hordeum vulgare subsp. vulgare]    153   1e-35
gb|ACN35320.1| unknown [Zea mays] gi|414590788|tpg|DAA41359.1| T...   151   5e-35
gb|ACG44003.1| SLD5 [Zea mays]                                        151   5e-35

>ref|XP_003564787.1| PREDICTED: DNA replication complex GINS protein SLD5-like
           [Brachypodium distachyon]
          Length = 215

 Score =  154 bits (389), Expect = 7e-36
 Identities = 74/93 (79%), Positives = 85/93 (91%)
 Frame = +1

Query: 10  NLWNRLSEEEQRFAKRCTDIMEKHLEQSVLSRLPYGYQSILKQSISSEEDDMVPEPQLDT 189
           +L +RLS +EQRFAK CT+IMEKHLEQSVLS+LPYGY S+ +QS+SS EDDMVPEPQLDT
Sbjct: 106 DLMSRLSLQEQRFAKSCTEIMEKHLEQSVLSKLPYGYDSVTRQSLSSTEDDMVPEPQLDT 165

Query: 190 FVFCKTKNAVGAFQLDDTGDEMVDLVADDLYVL 288
           FVFCKTK+ VGAFQLDD G+E+VDLVADDLYVL
Sbjct: 166 FVFCKTKSDVGAFQLDDIGEEIVDLVADDLYVL 198


>ref|XP_002279153.1| PREDICTED: DNA replication complex GINS protein SLD5 [Vitis
           vinifera] gi|296083231|emb|CBI22867.3| unnamed protein
           product [Vitis vinifera]
          Length = 220

 Score =  154 bits (389), Expect = 7e-36
 Identities = 74/95 (77%), Positives = 89/95 (93%)
 Frame = +1

Query: 4   KTNLWNRLSEEEQRFAKRCTDIMEKHLEQSVLSRLPYGYQSILKQSISSEEDDMVPEPQL 183
           KT++W+RLSE+EQ+FAKRCTD ME+HLEQSVLSRLP GYQSILKQS++SEEDDMVPEP+L
Sbjct: 110 KTDVWSRLSEQEQKFAKRCTDDMERHLEQSVLSRLPDGYQSILKQSVASEEDDMVPEPRL 169

Query: 184 DTFVFCKTKNAVGAFQLDDTGDEMVDLVADDLYVL 288
           DTFVFCK+K ++ AFQLDD+  E+VDLVADDLY+L
Sbjct: 170 DTFVFCKSKGSIEAFQLDDS-KEVVDLVADDLYIL 203


>dbj|BAK06665.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 217

 Score =  153 bits (387), Expect = 1e-35
 Identities = 73/93 (78%), Positives = 85/93 (91%)
 Frame = +1

Query: 10  NLWNRLSEEEQRFAKRCTDIMEKHLEQSVLSRLPYGYQSILKQSISSEEDDMVPEPQLDT 189
           +L +RLS++EQRFAK C +IMEKHLEQSVLS+LPYGY S+ +QS+SS EDDMVPEPQLDT
Sbjct: 108 DLLSRLSQQEQRFAKSCKEIMEKHLEQSVLSKLPYGYDSVTRQSLSSTEDDMVPEPQLDT 167

Query: 190 FVFCKTKNAVGAFQLDDTGDEMVDLVADDLYVL 288
           FVFCKTK+ VGAFQLDD G+E+VDLVADDLYVL
Sbjct: 168 FVFCKTKSDVGAFQLDDIGEEVVDLVADDLYVL 200


>gb|ACN35320.1| unknown [Zea mays] gi|414590788|tpg|DAA41359.1| TPA: SLD5 [Zea
           mays]
          Length = 219

 Score =  151 bits (382), Expect = 5e-35
 Identities = 72/93 (77%), Positives = 84/93 (90%)
 Frame = +1

Query: 10  NLWNRLSEEEQRFAKRCTDIMEKHLEQSVLSRLPYGYQSILKQSISSEEDDMVPEPQLDT 189
           +L +RLS++E+RFAK C +IMEKHLEQSVLS+LPYGY S+ +QS+SS EDDMVPEPQLDT
Sbjct: 110 DLLSRLSQQERRFAKSCAEIMEKHLEQSVLSKLPYGYDSVSRQSLSSTEDDMVPEPQLDT 169

Query: 190 FVFCKTKNAVGAFQLDDTGDEMVDLVADDLYVL 288
           FVFCKTK  VGAFQLDD G+E+VDLVADDLYVL
Sbjct: 170 FVFCKTKGDVGAFQLDDIGEEVVDLVADDLYVL 202


>gb|ACG44003.1| SLD5 [Zea mays]
          Length = 219

 Score =  151 bits (382), Expect = 5e-35
 Identities = 72/93 (77%), Positives = 84/93 (90%)
 Frame = +1

Query: 10  NLWNRLSEEEQRFAKRCTDIMEKHLEQSVLSRLPYGYQSILKQSISSEEDDMVPEPQLDT 189
           +L +RLS++E+RFAK C +IMEKHLEQSVLS+LPYGY S+ +QS+SS EDDMVPEPQLDT
Sbjct: 110 DLLSRLSQQERRFAKSCAEIMEKHLEQSVLSKLPYGYDSVSRQSLSSTEDDMVPEPQLDT 169

Query: 190 FVFCKTKNAVGAFQLDDTGDEMVDLVADDLYVL 288
           FVFCKTK  VGAFQLDD G+E+VDLVADDLYVL
Sbjct: 170 FVFCKTKGDVGAFQLDDIGEEVVDLVADDLYVL 202


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