BLASTX nr result
ID: Dioscorea21_contig00024764
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00024764 (805 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002319190.1| predicted protein [Populus trichocarpa] gi|2... 69 1e-09 ref|XP_002315369.1| f-box family protein [Populus trichocarpa] g... 56 4e-08 ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi... 57 1e-07 ref|XP_002319737.1| predicted protein [Populus trichocarpa] gi|2... 53 3e-07 ref|XP_002520646.1| conserved hypothetical protein [Ricinus comm... 52 5e-07 >ref|XP_002319190.1| predicted protein [Populus trichocarpa] gi|222857566|gb|EEE95113.1| predicted protein [Populus trichocarpa] Length = 405 Score = 68.9 bits (167), Expect = 1e-09 Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 16/203 (7%) Frame = +2 Query: 203 KVSALCSCDGLVLYRVKVYTDRSKFLF-------------HYLCNPFTLALKEIPCPDKE 343 +V+ + SC+GL+L K+ D+ KF+ +++CNP T K + P Sbjct: 106 EVTIIHSCNGLLLCCCKLMLDKPKFVKTTQMKNDGRYEFRYFVCNPTTKEFKILSPPKPA 165 Query: 344 FDKSSIEKMFLI-PDRRVISVEHVKTGEFQHKYLIKMYSMETNKWNICGTAFTRKYKLSY 520 + S+ LI P +V+ + K + + I +YS ET W++ F ++Y Sbjct: 166 YLSLSLAFDPLISPYYKVVCI--CKGNSSKQNFQIDVYSSETESWSLLPILFEMPLGMTY 223 Query: 521 FQGCFWNEAVNWISHSSSNNGIIKVVVSFNIENYDMQQIIIPDMSTAE-KRWRFYHIGES 697 G F + +V+W S++ ++ + F+I++ ++++ +P M + E W + GES Sbjct: 224 SNGVFLDGSVHWYSYAETS-------LYFHIDSQSVKKMPMPFMFSWEGMDWDIMYFGES 276 Query: 698 RGHLYFVRCE-KYNFVLEIFEAE 763 RGH++ V + + + ++FE E Sbjct: 277 RGHMHLVLTKNRSSLEFDVFEME 299 >ref|XP_002315369.1| f-box family protein [Populus trichocarpa] gi|222864409|gb|EEF01540.1| f-box family protein [Populus trichocarpa] Length = 406 Score = 56.2 bits (134), Expect(2) = 4e-08 Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 3/196 (1%) Frame = +2 Query: 140 PDPSLSVIKRRVPKILNVEDMKVSALCSCDGLVLYR-VKVYTDRSKFLFHYLCNPFTLAL 316 P+PSL I+ +D V SC+GL+L + + D K+ Y+C P T Sbjct: 113 PEPSLCFIE---------DDQGVCIQHSCNGLLLCSSFRCHEDDRKY---YICKPTTKQY 160 Query: 317 KEIPCPDKE--FDKSSIEKMFLIPDRRVISVEHVKTGEFQHKYLIKMYSMETNKWNICGT 490 ++P P + F + + P ++I V IKMY W + G Sbjct: 161 HQLPKPGCKIVFGINIAYDPTISPHYKIICVCDSNA--------IKMYDSAIGSWRVSGN 212 Query: 491 AFTRKYKLSYFQGCFWNEAVNWISHSSSNNGIIKVVVSFNIENYDMQQIIIPDMSTAEKR 670 + L + +G F N A++WIS + + + F+IE M + +P + Sbjct: 213 HQVFSHVLLFNRGVFLNRALHWISRGA-------LALRFDIEQERMLTMPMPPIPEGRSE 265 Query: 671 WRFYHIGESRGHLYFV 718 R + GES GHL + Sbjct: 266 RRLGYFGESGGHLCLI 281 Score = 27.7 bits (60), Expect(2) = 4e-08 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = +3 Query: 765 DYSGWSILYHVDL 803 DYSGWS+ Y VDL Sbjct: 299 DYSGWSVRYRVDL 311 >ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera] gi|296090309|emb|CBI40128.3| unnamed protein product [Vitis vinifera] Length = 415 Score = 56.6 bits (135), Expect(2) = 1e-07 Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 9/184 (4%) Frame = +2 Query: 194 EDMKVSALCSCDGLVLYRV--KVYTDRSKFLFHYLCNPFTLALKEIPCPDKEFDKSSIEK 367 + + V L C+GL+ + T R+ +Y+CN T +P P + ++ Sbjct: 117 DPLGVKVLQVCNGLLCCSTVRSLGTSRN----YYICNLATRRFSVLPPPCSSGGRDTVFG 172 Query: 368 MFLIPDRR---VISVEHVKTGEFQ-HKYLIKMYSMETNKWNICGTAFTRKYKLSYFQGCF 535 + L D SV V++ E Y I++YS T W + G F + + ++ G F Sbjct: 173 INLAFDPSKSPYYSVICVRSCEVSISHYQIEIYSSGTGDWRLSGKPFRAPFDMVFYDGVF 232 Query: 536 WNEAVNWISHSSSNNGIIKVVVSFNIENYDMQQIIIPDMSTAEKRW---RFYHIGESRGH 706 WN AV+WIS S ++ + F I+ + +P W R H GES GH Sbjct: 233 WNGAVHWISPSGAS-------LYFGIDEGRID--TMPPPPPGPGGWGKRRIRHFGESGGH 283 Query: 707 LYFV 718 L+ + Sbjct: 284 LHII 287 Score = 25.8 bits (55), Expect(2) = 1e-07 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +3 Query: 732 TILFWKYSRPKDYSGWSILYHVDL 803 T F Y +DYS W + + VDL Sbjct: 294 TTQFVVYEMERDYSNWGVRFSVDL 317 >ref|XP_002319737.1| predicted protein [Populus trichocarpa] gi|222858113|gb|EEE95660.1| predicted protein [Populus trichocarpa] Length = 396 Score = 52.8 bits (125), Expect(2) = 3e-07 Identities = 48/202 (23%), Positives = 80/202 (39%), Gaps = 12/202 (5%) Frame = +2 Query: 143 DPSLSVIKRRVPKILNVE-DMKVSALCSCDGLVLYRVKVY----TDRSKFLFHYLCNPFT 307 D S S + V LNV + ++ SC+GL+L Y D L +CNP T Sbjct: 88 DDSSSYSQAAVFDYLNVSPNYRLKIKNSCNGLILCMSIFYGCGFDDAGSELKGIICNPTT 147 Query: 308 LALKEIPCPDKEFDKSSIEKMFLIPDRRVISVEHVKTGEFQHKYLIK------MYSMETN 469 K + P +F S F + H K Y + +YS TN Sbjct: 148 KQFKTLSFPVPKFGNSKTYSSFYGLAFDPLKSHHYKIICLHVDYRVSKNPQIYLYSSRTN 207 Query: 470 KWNICGTAFTRKYKLSYFQGCFWNEAVNWISHSSSNNGIIKVVVSFNIENYDMQQIIIPD 649 W+ + + G F N+A++W S+ + + F++ ++ + +P Sbjct: 208 SWSFLQNSLEAPTLYGFVNGVFCNDAIHWCSYE-------QTTLYFDVNTESLKIMPMPP 260 Query: 650 MSTAEKRWR-FYHIGESRGHLY 712 + + R+R + GESRG L+ Sbjct: 261 IFSTVNRFREMMYFGESRGRLH 282 Score = 28.1 bits (61), Expect(2) = 3e-07 Identities = 10/13 (76%), Positives = 13/13 (100%) Frame = +3 Query: 765 DYSGWSILYHVDL 803 DYSGWS+LY+V+L Sbjct: 302 DYSGWSLLYNVNL 314 >ref|XP_002520646.1| conserved hypothetical protein [Ricinus communis] gi|223540166|gb|EEF41742.1| conserved hypothetical protein [Ricinus communis] Length = 397 Score = 52.0 bits (123), Expect(2) = 5e-07 Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 20/190 (10%) Frame = +2 Query: 203 KVSALCSCDGLVLYRVKVYTDRSKF--LFHYLCNPFTLALKEIPCP---DKEFDKSSIEK 367 ++ L SC+GL+L R + D + +++CNP T K I P +++F + Sbjct: 104 QLQILQSCNGLLLCRSSMLKDHNLIGGFVYFVCNPTTKQSKRICYPVSLEQKFKTRYLMS 163 Query: 368 MFLI------PDRRVISVEHVKTGEFQHKYLIKMYSMETNKW--------NICGTAFTRK 505 + L P +++ + ++ + H +YS + + W +C Sbjct: 164 VSLAFDPKMSPHYKIVFIFELRKNKETHVVETYVYSSKNDSWVSRREDVTELCMNLVPPP 223 Query: 506 -YKLSYFQGCFWNEAVNWISHSSSNNGIIKVVVSFNIENYDMQQIIIPDMSTAEKRWRFY 682 + + G + N A++W S NG ++ FN++ + ++I P AE + R++ Sbjct: 224 TLGIGFRDGVYANAAIHW----SRYNGRSSSLLCFNVDTFTFKKICFP----AELKVRYF 275 Query: 683 HIGESRGHLY 712 GESRGHLY Sbjct: 276 --GESRGHLY 283 Score = 28.1 bits (61), Expect(2) = 5e-07 Identities = 9/13 (69%), Positives = 12/13 (92%) Frame = +3 Query: 765 DYSGWSILYHVDL 803 DYSGW ++YHV+L Sbjct: 304 DYSGWFVMYHVNL 316