BLASTX nr result

ID: Dioscorea21_contig00024764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024764
         (805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319190.1| predicted protein [Populus trichocarpa] gi|2...    69   1e-09
ref|XP_002315369.1| f-box family protein [Populus trichocarpa] g...    56   4e-08
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    57   1e-07
ref|XP_002319737.1| predicted protein [Populus trichocarpa] gi|2...    53   3e-07
ref|XP_002520646.1| conserved hypothetical protein [Ricinus comm...    52   5e-07

>ref|XP_002319190.1| predicted protein [Populus trichocarpa] gi|222857566|gb|EEE95113.1|
           predicted protein [Populus trichocarpa]
          Length = 405

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
 Frame = +2

Query: 203 KVSALCSCDGLVLYRVKVYTDRSKFLF-------------HYLCNPFTLALKEIPCPDKE 343
           +V+ + SC+GL+L   K+  D+ KF+              +++CNP T   K +  P   
Sbjct: 106 EVTIIHSCNGLLLCCCKLMLDKPKFVKTTQMKNDGRYEFRYFVCNPTTKEFKILSPPKPA 165

Query: 344 FDKSSIEKMFLI-PDRRVISVEHVKTGEFQHKYLIKMYSMETNKWNICGTAFTRKYKLSY 520
           +   S+    LI P  +V+ +   K    +  + I +YS ET  W++    F     ++Y
Sbjct: 166 YLSLSLAFDPLISPYYKVVCI--CKGNSSKQNFQIDVYSSETESWSLLPILFEMPLGMTY 223

Query: 521 FQGCFWNEAVNWISHSSSNNGIIKVVVSFNIENYDMQQIIIPDMSTAE-KRWRFYHIGES 697
             G F + +V+W S++ ++       + F+I++  ++++ +P M + E   W   + GES
Sbjct: 224 SNGVFLDGSVHWYSYAETS-------LYFHIDSQSVKKMPMPFMFSWEGMDWDIMYFGES 276

Query: 698 RGHLYFVRCE-KYNFVLEIFEAE 763
           RGH++ V  + + +   ++FE E
Sbjct: 277 RGHMHLVLTKNRSSLEFDVFEME 299


>ref|XP_002315369.1| f-box family protein [Populus trichocarpa]
           gi|222864409|gb|EEF01540.1| f-box family protein
           [Populus trichocarpa]
          Length = 406

 Score = 56.2 bits (134), Expect(2) = 4e-08
 Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 3/196 (1%)
 Frame = +2

Query: 140 PDPSLSVIKRRVPKILNVEDMKVSALCSCDGLVLYR-VKVYTDRSKFLFHYLCNPFTLAL 316
           P+PSL  I+         +D  V    SC+GL+L    + + D  K+   Y+C P T   
Sbjct: 113 PEPSLCFIE---------DDQGVCIQHSCNGLLLCSSFRCHEDDRKY---YICKPTTKQY 160

Query: 317 KEIPCPDKE--FDKSSIEKMFLIPDRRVISVEHVKTGEFQHKYLIKMYSMETNKWNICGT 490
            ++P P  +  F  +      + P  ++I V             IKMY      W + G 
Sbjct: 161 HQLPKPGCKIVFGINIAYDPTISPHYKIICVCDSNA--------IKMYDSAIGSWRVSGN 212

Query: 491 AFTRKYKLSYFQGCFWNEAVNWISHSSSNNGIIKVVVSFNIENYDMQQIIIPDMSTAEKR 670
                + L + +G F N A++WIS  +       + + F+IE   M  + +P +      
Sbjct: 213 HQVFSHVLLFNRGVFLNRALHWISRGA-------LALRFDIEQERMLTMPMPPIPEGRSE 265

Query: 671 WRFYHIGESRGHLYFV 718
            R  + GES GHL  +
Sbjct: 266 RRLGYFGESGGHLCLI 281



 Score = 27.7 bits (60), Expect(2) = 4e-08
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +3

Query: 765 DYSGWSILYHVDL 803
           DYSGWS+ Y VDL
Sbjct: 299 DYSGWSVRYRVDL 311


>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score = 56.6 bits (135), Expect(2) = 1e-07
 Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 9/184 (4%)
 Frame = +2

Query: 194 EDMKVSALCSCDGLVLYRV--KVYTDRSKFLFHYLCNPFTLALKEIPCPDKEFDKSSIEK 367
           + + V  L  C+GL+       + T R+    +Y+CN  T     +P P     + ++  
Sbjct: 117 DPLGVKVLQVCNGLLCCSTVRSLGTSRN----YYICNLATRRFSVLPPPCSSGGRDTVFG 172

Query: 368 MFLIPDRR---VISVEHVKTGEFQ-HKYLIKMYSMETNKWNICGTAFTRKYKLSYFQGCF 535
           + L  D       SV  V++ E     Y I++YS  T  W + G  F   + + ++ G F
Sbjct: 173 INLAFDPSKSPYYSVICVRSCEVSISHYQIEIYSSGTGDWRLSGKPFRAPFDMVFYDGVF 232

Query: 536 WNEAVNWISHSSSNNGIIKVVVSFNIENYDMQQIIIPDMSTAEKRW---RFYHIGESRGH 706
           WN AV+WIS S ++       + F I+   +    +P        W   R  H GES GH
Sbjct: 233 WNGAVHWISPSGAS-------LYFGIDEGRID--TMPPPPPGPGGWGKRRIRHFGESGGH 283

Query: 707 LYFV 718
           L+ +
Sbjct: 284 LHII 287



 Score = 25.8 bits (55), Expect(2) = 1e-07
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 732 TILFWKYSRPKDYSGWSILYHVDL 803
           T  F  Y   +DYS W + + VDL
Sbjct: 294 TTQFVVYEMERDYSNWGVRFSVDL 317


>ref|XP_002319737.1| predicted protein [Populus trichocarpa] gi|222858113|gb|EEE95660.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score = 52.8 bits (125), Expect(2) = 3e-07
 Identities = 48/202 (23%), Positives = 80/202 (39%), Gaps = 12/202 (5%)
 Frame = +2

Query: 143 DPSLSVIKRRVPKILNVE-DMKVSALCSCDGLVLYRVKVY----TDRSKFLFHYLCNPFT 307
           D S S  +  V   LNV  + ++    SC+GL+L     Y     D    L   +CNP T
Sbjct: 88  DDSSSYSQAAVFDYLNVSPNYRLKIKNSCNGLILCMSIFYGCGFDDAGSELKGIICNPTT 147

Query: 308 LALKEIPCPDKEFDKSSIEKMFLIPDRRVISVEHVKTGEFQHKYLIK------MYSMETN 469
              K +  P  +F  S     F       +   H K       Y +       +YS  TN
Sbjct: 148 KQFKTLSFPVPKFGNSKTYSSFYGLAFDPLKSHHYKIICLHVDYRVSKNPQIYLYSSRTN 207

Query: 470 KWNICGTAFTRKYKLSYFQGCFWNEAVNWISHSSSNNGIIKVVVSFNIENYDMQQIIIPD 649
            W+    +        +  G F N+A++W S+        +  + F++    ++ + +P 
Sbjct: 208 SWSFLQNSLEAPTLYGFVNGVFCNDAIHWCSYE-------QTTLYFDVNTESLKIMPMPP 260

Query: 650 MSTAEKRWR-FYHIGESRGHLY 712
           + +   R+R   + GESRG L+
Sbjct: 261 IFSTVNRFREMMYFGESRGRLH 282



 Score = 28.1 bits (61), Expect(2) = 3e-07
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = +3

Query: 765 DYSGWSILYHVDL 803
           DYSGWS+LY+V+L
Sbjct: 302 DYSGWSLLYNVNL 314


>ref|XP_002520646.1| conserved hypothetical protein [Ricinus communis]
           gi|223540166|gb|EEF41742.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 397

 Score = 52.0 bits (123), Expect(2) = 5e-07
 Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 20/190 (10%)
 Frame = +2

Query: 203 KVSALCSCDGLVLYRVKVYTDRSKF--LFHYLCNPFTLALKEIPCP---DKEFDKSSIEK 367
           ++  L SC+GL+L R  +  D +      +++CNP T   K I  P   +++F    +  
Sbjct: 104 QLQILQSCNGLLLCRSSMLKDHNLIGGFVYFVCNPTTKQSKRICYPVSLEQKFKTRYLMS 163

Query: 368 MFLI------PDRRVISVEHVKTGEFQHKYLIKMYSMETNKW--------NICGTAFTRK 505
           + L       P  +++ +  ++  +  H     +YS + + W         +C       
Sbjct: 164 VSLAFDPKMSPHYKIVFIFELRKNKETHVVETYVYSSKNDSWVSRREDVTELCMNLVPPP 223

Query: 506 -YKLSYFQGCFWNEAVNWISHSSSNNGIIKVVVSFNIENYDMQQIIIPDMSTAEKRWRFY 682
              + +  G + N A++W    S  NG    ++ FN++ +  ++I  P    AE + R++
Sbjct: 224 TLGIGFRDGVYANAAIHW----SRYNGRSSSLLCFNVDTFTFKKICFP----AELKVRYF 275

Query: 683 HIGESRGHLY 712
             GESRGHLY
Sbjct: 276 --GESRGHLY 283



 Score = 28.1 bits (61), Expect(2) = 5e-07
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +3

Query: 765 DYSGWSILYHVDL 803
           DYSGW ++YHV+L
Sbjct: 304 DYSGWFVMYHVNL 316


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