BLASTX nr result

ID: Dioscorea21_contig00024756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024756
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC76398.1| hypothetical protein OsI_14033 [Oryza sativa Indi...   183   2e-44
ref|NP_001051677.1| Os03g0812000 [Oryza sativa Japonica Group] g...   183   2e-44
sp|Q7XZF7.2|GYRA_ORYSJ RecName: Full=Probable DNA gyrase subunit...   183   2e-44
gb|ABF99505.1| DNA gyrase subunit A, putative, expressed [Oryza ...   183   2e-44
gb|AAP73860.1| putative DNA gyrase subunit [Oryza sativa Japonic...   183   2e-44

>gb|EEC76398.1| hypothetical protein OsI_14033 [Oryza sativa Indica Group]
            gi|222626031|gb|EEE60163.1| hypothetical protein
            OsJ_13077 [Oryza sativa Japonica Group]
          Length = 872

 Score =  183 bits (465), Expect = 2e-44
 Identities = 93/116 (80%), Positives = 104/116 (89%)
 Frame = +1

Query: 7    RDLRPPWLLFISESGRGKRVPLSNFRQSKFNRVGLRGYKLPEDYRLAAVFVVGFSLAEDG 186
            RDL PPWLLFI+++G GKRVPL+ FRQ  FNRVGL+GYKLP D  LAAVFVVGFSL +DG
Sbjct: 731  RDLSPPWLLFIADNGIGKRVPLNAFRQGNFNRVGLQGYKLPPDCSLAAVFVVGFSLTDDG 790

Query: 187  ESDEHVVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLEHAGKIQSASLISAATDD 354
            ESDE VVLVSQSGTVNRIKV+D+SI+SR ARGVILMRLEHAGKIQSASLISAA ++
Sbjct: 791  ESDEQVVLVSQSGTVNRIKVKDISIRSRSARGVILMRLEHAGKIQSASLISAAEEE 846


>ref|NP_001051677.1| Os03g0812000 [Oryza sativa Japonica Group]
           gi|113550148|dbj|BAF13591.1| Os03g0812000, partial
           [Oryza sativa Japonica Group]
          Length = 438

 Score =  183 bits (465), Expect = 2e-44
 Identities = 93/116 (80%), Positives = 104/116 (89%)
 Frame = +1

Query: 7   RDLRPPWLLFISESGRGKRVPLSNFRQSKFNRVGLRGYKLPEDYRLAAVFVVGFSLAEDG 186
           RDL PPWLLFI+++G GKRVPL+ FRQ  FNRVGL+GYKLP D  LAAVFVVGFSL +DG
Sbjct: 297 RDLSPPWLLFIADNGIGKRVPLNAFRQGNFNRVGLQGYKLPPDCSLAAVFVVGFSLTDDG 356

Query: 187 ESDEHVVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLEHAGKIQSASLISAATDD 354
           ESDE VVLVSQSGTVNRIKV+D+SI+SR ARGVILMRLEHAGKIQSASLISAA ++
Sbjct: 357 ESDEQVVLVSQSGTVNRIKVKDISIRSRSARGVILMRLEHAGKIQSASLISAAEEE 412


>sp|Q7XZF7.2|GYRA_ORYSJ RecName: Full=Probable DNA gyrase subunit A,
            chloroplastic/mitochondrial; Flags: Precursor
          Length = 939

 Score =  183 bits (465), Expect = 2e-44
 Identities = 93/116 (80%), Positives = 104/116 (89%)
 Frame = +1

Query: 7    RDLRPPWLLFISESGRGKRVPLSNFRQSKFNRVGLRGYKLPEDYRLAAVFVVGFSLAEDG 186
            RDL PPWLLFI+++G GKRVPL+ FRQ  FNRVGL+GYKLP D  LAAVFVVGFSL +DG
Sbjct: 798  RDLSPPWLLFIADNGIGKRVPLNAFRQGNFNRVGLQGYKLPPDCSLAAVFVVGFSLTDDG 857

Query: 187  ESDEHVVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLEHAGKIQSASLISAATDD 354
            ESDE VVLVSQSGTVNRIKV+D+SI+SR ARGVILMRLEHAGKIQSASLISAA ++
Sbjct: 858  ESDEQVVLVSQSGTVNRIKVKDISIRSRSARGVILMRLEHAGKIQSASLISAAEEE 913


>gb|ABF99505.1| DNA gyrase subunit A, putative, expressed [Oryza sativa Japonica
           Group] gi|215765245|dbj|BAG86942.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 356

 Score =  183 bits (465), Expect = 2e-44
 Identities = 93/116 (80%), Positives = 104/116 (89%)
 Frame = +1

Query: 7   RDLRPPWLLFISESGRGKRVPLSNFRQSKFNRVGLRGYKLPEDYRLAAVFVVGFSLAEDG 186
           RDL PPWLLFI+++G GKRVPL+ FRQ  FNRVGL+GYKLP D  LAAVFVVGFSL +DG
Sbjct: 215 RDLSPPWLLFIADNGIGKRVPLNAFRQGNFNRVGLQGYKLPPDCSLAAVFVVGFSLTDDG 274

Query: 187 ESDEHVVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLEHAGKIQSASLISAATDD 354
           ESDE VVLVSQSGTVNRIKV+D+SI+SR ARGVILMRLEHAGKIQSASLISAA ++
Sbjct: 275 ESDEQVVLVSQSGTVNRIKVKDISIRSRSARGVILMRLEHAGKIQSASLISAAEEE 330


>gb|AAP73860.1| putative DNA gyrase subunit [Oryza sativa Japonica Group]
          Length = 931

 Score =  183 bits (465), Expect = 2e-44
 Identities = 93/116 (80%), Positives = 104/116 (89%)
 Frame = +1

Query: 7    RDLRPPWLLFISESGRGKRVPLSNFRQSKFNRVGLRGYKLPEDYRLAAVFVVGFSLAEDG 186
            RDL PPWLLFI+++G GKRVPL+ FRQ  FNRVGL+GYKLP D  LAAVFVVGFSL +DG
Sbjct: 798  RDLSPPWLLFIADNGIGKRVPLNAFRQGNFNRVGLQGYKLPPDCSLAAVFVVGFSLTDDG 857

Query: 187  ESDEHVVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLEHAGKIQSASLISAATDD 354
            ESDE VVLVSQSGTVNRIKV+D+SI+SR ARGVILMRLEHAGKIQSASLISAA ++
Sbjct: 858  ESDEQVVLVSQSGTVNRIKVKDISIRSRSARGVILMRLEHAGKIQSASLISAAEEE 913


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