BLASTX nr result

ID: Dioscorea21_contig00024755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024755
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-l...    82   3e-14
ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-l...    82   6e-14
ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_002460734.1| hypothetical protein SORBIDRAFT_02g034000 [S...    81   1e-13
ref|XP_003563083.1| PREDICTED: ATP-dependent DNA helicase pcrA-l...    80   2e-13

>ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-like [Vitis vinifera]
          Length = 1113

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 49/134 (36%), Positives = 71/134 (52%), Gaps = 44/134 (32%)
 Frame = -3

Query: 366 SECAYIVDKVLEMTSEKST----------------------------------------- 310
           ++CA++VDK+LE+TS+ S                                          
Sbjct: 552 AQCAFVVDKILEITSDDSVAKYSFGSVAILYRRQVSGKVFQTAFRDRKIPFNIHGVAFYR 611

Query: 309 --VTRAIMSILRTTLPGCDN-SFQRVSKAPLPVDKEEKKQVIGFVEKVSTISNCRFISAT 139
             V RAI+++LRTTL GCD+ S+++V KA LP DKE+KK+VI  ++K+S    C F+SA 
Sbjct: 612 KKVVRAIVAMLRTTLSGCDDGSYRQVFKALLPCDKEDKKRVIEHIDKISITRKCSFVSAA 671

Query: 138 SGIFAANISSTFTR 97
           S IF+A +S TF R
Sbjct: 672 SDIFSAKVSGTFKR 685


>ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Glycine max]
          Length = 1123

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/75 (52%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
 Frame = -3

Query: 318 KSTVTRAIMSILRTTLPGCDN-SFQRVSKAPLPVDKEEKKQVIGFVEKVSTISNCRFISA 142
           +  V R IM++LRT LPGCD+ S+ RV KA +P++K++KK++I  + K+STI  C F+SA
Sbjct: 620 RKKVVRTIMAMLRTALPGCDDGSYSRVFKALMPLEKDKKKRIIDHINKISTIRRCSFLSA 679

Query: 141 TSGIFAANISSTFTR 97
            S IF+A IS TF R
Sbjct: 680 ASDIFSAKISGTFKR 694


>ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|222832580|gb|EEE71057.1|
           predicted protein [Populus trichocarpa]
          Length = 1056

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 49/134 (36%), Positives = 70/134 (52%), Gaps = 44/134 (32%)
 Frame = -3

Query: 366 SECAYIVDKVLEMTSEKS------------------------------------------ 313
           +ECA++VDK+LE  S+ S                                          
Sbjct: 496 AECAFVVDKILEAASDGSHSKPSYGSIAILYRRQVSGKIFQLAFRERKIPFNVHGVAFYR 555

Query: 312 -TVTRAIMSILRTTLPGCDN-SFQRVSKAPLPVDKEEKKQVIGFVEKVSTISNCRFISAT 139
             V +AI+++LRTTLPGCD+ S+ +V KA LP +KEEK++VI  V+K+ST+  C FI+A 
Sbjct: 556 KKVVKAIIAMLRTTLPGCDDGSYHQVFKALLPFEKEEKRRVIEHVDKISTVRKCSFIAAA 615

Query: 138 SGIFAANISSTFTR 97
             +F+A IS TF R
Sbjct: 616 CDVFSAKISGTFKR 629


>ref|XP_002460734.1| hypothetical protein SORBIDRAFT_02g034000 [Sorghum bicolor]
            gi|241924111|gb|EER97255.1| hypothetical protein
            SORBIDRAFT_02g034000 [Sorghum bicolor]
          Length = 1185

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 49/133 (36%), Positives = 67/133 (50%), Gaps = 43/133 (32%)
 Frame = -3

Query: 366  SECAYIVDKVLEMTSE------------------------------------------KS 313
            S+CA+++DK++E TS                                           + 
Sbjct: 641  SQCAFVIDKIIETTSTTAEGCNFGNIAVLYRRQVTGKAFQVSFRNRKIPFNVHGVAFYRK 700

Query: 312  TVTRAIMSILRTTLPGCDNS-FQRVSKAPLPVDKEEKKQVIGFVEKVSTISNCRFISATS 136
             V +AIM+ILRTTLPGCD+  + +  KA LP DKEEKK++I  VEK+S    C FISA +
Sbjct: 701  KVIKAIMAILRTTLPGCDDGPWCQAFKALLPCDKEEKKKIIDHVEKISLARECSFISAAT 760

Query: 135  GIFAANISSTFTR 97
             IF+A +S TF R
Sbjct: 761  DIFSAKVSGTFKR 773


>ref|XP_003563083.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Brachypodium
            distachyon]
          Length = 1192

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 49/133 (36%), Positives = 67/133 (50%), Gaps = 43/133 (32%)
 Frame = -3

Query: 366  SECAYIVDKVLEMTSE------------------------------------------KS 313
            S+CA+++DK++E TS                                           + 
Sbjct: 648  SQCAFVIDKIIETTSSSAEGCNFGKIAVLYRRQVTGKAFQASFRNRKIPFNIHGVAFYRK 707

Query: 312  TVTRAIMSILRTTLPGCDNS-FQRVSKAPLPVDKEEKKQVIGFVEKVSTISNCRFISATS 136
             V +AIM+ILRTTLP CD+  +++  KA LP DKEEKK+VI  VEK+S    C FISA +
Sbjct: 708  KVIKAIMAILRTTLPACDDGPWRQALKALLPGDKEEKKKVIDHVEKISLARKCSFISAAT 767

Query: 135  GIFAANISSTFTR 97
             IF+A +S TF R
Sbjct: 768  DIFSAKVSGTFKR 780


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